RNA–Protein interactions for RNA: ENST00000497203.1

SMC4-225, Transcript of structural maintenance of chromosomes 4, humanhuman

TSL 3

Gene SMC4, Length 490 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC4-225ENST00000497203 NAP1L4Q99733 375 aaKnown RBP4.68□□□□□ -1.66
SMC4-225ENST00000497203 ACTRT3Q9BYD9 372 aa4.68□□□□□ -1.66
SMC4-225ENST00000497203 NOL12Q9UGY1 213 aaKnown RBP eCLIP4.68□□□□□ -1.66
SMC4-225ENST00000497203 USP22Q9UPT9 525 aa4.68□□□□□ -1.66
SMC4-225ENST00000497203 ADGRA2Q96PE1 1338 aa4.68□□□□□ -1.66
SMC4-225ENST00000497203 SLC16A3O15427 465 aaKnown RBP4.67□□□□□ -1.66
SMC4-225ENST00000497203 ASNA1O43681 348 aa4.67□□□□□ -1.66
SMC4-225ENST00000497203 NTSR2O95665 410 aa4.67□□□□□ -1.66
SMC4-225ENST00000497203 PDHA1P08559 390 aa4.67□□□□□ -1.66
SMC4-225ENST00000497203 ELFN1P0C7U0 828 aa4.67□□□□□ -1.66
SMC4-225ENST00000497203 SRGAP2BP0DMP2 458 aa4.67□□□□□ -1.66
SMC4-225ENST00000497203 VEGFAP15692 232 aaPredicted RBP4.67□□□□□ -1.66
SMC4-225ENST00000497203 UQCRC1P31930 480 aa4.67□□□□□ -1.66
SMC4-225ENST00000497203 TIAL1Q01085 375 aaKnown RBP eCLIP4.67□□□□□ -1.66
SMC4-225ENST00000497203 NBPF8Q3BBV2 869 aa4.67□□□□□ -1.66
SMC4-225ENST00000497203 DEPDC1Q5TB30 811 aa4.67□□□□□ -1.66
SMC4-225ENST00000497203 ATPAF1Q5TC12 328 aaPredicted RBP4.67□□□□□ -1.66
SMC4-225ENST00000497203 ABLIM2Q6H8Q1 611 aa4.67□□□□□ -1.66
SMC4-225ENST00000497203 KLHL17Q6TDP4 642 aa4.67□□□□□ -1.66
SMC4-225ENST00000497203 DTX2Q86UW9 622 aa4.67□□□□□ -1.66
SMC4-225ENST00000497203 RAB11FIP4Q86YS3 637 aa4.67□□□□□ -1.66
SMC4-225ENST00000497203 IZUMO1Q8IYV9 350 aa4.67□□□□□ -1.66
SMC4-225ENST00000497203 NRSN1Q8IZ57 195 aa4.67□□□□□ -1.66
SMC4-225ENST00000497203 CAGE1Q8TC20 777 aa4.67□□□□□ -1.66
SMC4-225ENST00000497203 ATG4AQ8WYN0 398 aa4.67□□□□□ -1.66
SMC4-225ENST00000497203 NUDT22Q9BRQ3 303 aa4.67□□□□□ -1.66
SMC4-225ENST00000497203 SORBS1Q9BX66 1292 aaKnown RBP4.67□□□□□ -1.66
SMC4-225ENST00000497203 VN1R3Q9BXE9 311 aa4.67□□□□□ -1.66
SMC4-225ENST00000497203 TP63Q9H3D4 680 aaPredicted RBP4.67□□□□□ -1.66
SMC4-225ENST00000497203 R3HDMLQ9H3Y0 253 aa4.67□□□□□ -1.66
SMC4-225ENST00000497203 AS3MTQ9HBK9 375 aa4.67□□□□□ -1.66
SMC4-225ENST00000497203 GLOD4Q9HC38 313 aa4.67□□□□□ -1.66
SMC4-225ENST00000497203 TRIM36Q9NQ86 728 aa4.67□□□□□ -1.66
SMC4-225ENST00000497203 VPS51Q9UID3 782 aa4.67□□□□□ -1.66
SMC4-225ENST00000497203 TLK1Q9UKI8 766 aa4.67□□□□□ -1.66
SMC4-225ENST00000497203 INSL6Q9Y581 213 aa4.67□□□□□ -1.66
SMC4-225ENST00000497203 PSMD9O00233 223 aa4.66□□□□□ -1.66
SMC4-225ENST00000497203 ZSCAN9O15535 394 aaPredicted RBP4.66□□□□□ -1.66
SMC4-225ENST00000497203 TNFRSF6BO95407 300 aa4.66□□□□□ -1.66
SMC4-225ENST00000497203 ARP10275 920 aa4.66□□□□□ -1.66
SMC4-225ENST00000497203 HGFP14210 728 aa4.66□□□□□ -1.66
SMC4-225ENST00000497203 CD19P15391 556 aa4.66□□□□□ -1.66
SMC4-225ENST00000497203 PAX3P23760 479 aa4.66□□□□□ -1.66
SMC4-225ENST00000497203 RBL1P28749 1068 aa4.66□□□□□ -1.66
SMC4-225ENST00000497203 ADORA2AP29274 412 aa4.66□□□□□ -1.66
SMC4-225ENST00000497203 CLCA4Q14CN2 919 aa4.66□□□□□ -1.66
SMC4-225ENST00000497203 POSTNQ15063 836 aa4.66□□□□□ -1.66
SMC4-225ENST00000497203 ALFQ53S48 1182 aa4.66□□□□□ -1.66
SMC4-225ENST00000497203 STRIP1Q5VSL9 837 aa4.66□□□□□ -1.66
SMC4-225ENST00000497203 RINLQ6ZS11 566 aa4.66□□□□□ -1.66
SMC4-225ENST00000497203 CCDC117Q8IWD4 279 aaPredicted RBP4.66□□□□□ -1.66
SMC4-225ENST00000497203 PAF1Q8N7H5 531 aa4.66□□□□□ -1.66
SMC4-225ENST00000497203 FAM98AQ8NCA5 519 aaKnown RBP4.66□□□□□ -1.66
SMC4-225ENST00000497203 STT3BQ8TCJ2 826 aa4.66□□□□□ -1.66
SMC4-225ENST00000497203 OTUD7AQ8TE49 926 aaPredicted RBP4.66□□□□□ -1.66
SMC4-225ENST00000497203 WDR60Q8WVS4 1066 aa4.66□□□□□ -1.66
SMC4-225ENST00000497203 RUBCNQ92622 972 aa4.66□□□□□ -1.66
SMC4-225ENST00000497203 FKBP10Q96AY3 582 aa4.66□□□□□ -1.66
SMC4-225ENST00000497203 CRAMP1Q96RY5 1269 aa4.66□□□□□ -1.66
SMC4-225ENST00000497203 FAM167BQ9BTA0 163 aa4.66□□□□□ -1.66
SMC4-225ENST00000497203 DUSP26Q9BV47 211 aa4.66□□□□□ -1.66
SMC4-225ENST00000497203 ALG8Q9BVK2 526 aa4.66□□□□□ -1.66
SMC4-225ENST00000497203 SAYSD1Q9NPB0 183 aa4.66□□□□□ -1.66
SMC4-225ENST00000497203 IL17RBQ9NRM6 502 aa4.66□□□□□ -1.66
SMC4-225ENST00000497203 KLC4Q9NSK0 619 aa4.66□□□□□ -1.66
SMC4-225ENST00000497203 DKK3Q9UBP4 350 aa4.66□□□□□ -1.66
SMC4-225ENST00000497203 STEAP1Q9UHE8 339 aa4.66□□□□□ -1.66
SMC4-225ENST00000497203 GPR52Q9Y2T5 361 aa4.66□□□□□ -1.66
SMC4-225ENST00000497203 SNX14Q9Y5W7 946 aa4.66□□□□□ -1.66
SMC4-225ENST00000497203 COL15A1P39059 1388 aa4.65□□□□□ -1.66
SMC4-225ENST00000497203 FER1L4A9Z1Z3 1794 aa4.65□□□□□ -1.66
SMC4-225ENST00000497203 LINC00473A8K010 186 aa4.65□□□□□ -1.67
SMC4-225ENST00000497203 M0R3H8 397 aa4.65□□□□□ -1.67
SMC4-225ENST00000497203 FCHO1O14526 889 aa4.65□□□□□ -1.67
SMC4-225ENST00000497203 PPM1DO15297 605 aa4.65□□□□□ -1.67
SMC4-225ENST00000497203 ACTL6BO94805 426 aa4.65□□□□□ -1.67
SMC4-225ENST00000497203 ONECUT2O95948 504 aa4.65□□□□□ -1.67
SMC4-225ENST00000497203 ANXA6P08133 673 aa4.65□□□□□ -1.67
SMC4-225ENST00000497203 GRIA3P42263 894 aa4.65□□□□□ -1.67
SMC4-225ENST00000497203 ATXN1P54253 815 aaKnown RBP4.65□□□□□ -1.67
SMC4-225ENST00000497203 CACNA2D1P54289 1103 aa4.65□□□□□ -1.67
SMC4-225ENST00000497203 TIRAPP58753 221 aa4.65□□□□□ -1.67
SMC4-225ENST00000497203 AP2B1P63010 937 aa4.65□□□□□ -1.67
SMC4-225ENST00000497203 SP2Q02086 613 aa4.65□□□□□ -1.67
SMC4-225ENST00000497203 EIF2B5Q13144 721 aaKnown RBP4.65□□□□□ -1.67
SMC4-225ENST00000497203 ADCK5Q3MIX3 580 aa4.65□□□□□ -1.67
SMC4-225ENST00000497203 ZNF618Q5T7W0 954 aa4.65□□□□□ -1.67
SMC4-225ENST00000497203 SULT6B1Q6IMI4 303 aa4.65□□□□□ -1.67
SMC4-225ENST00000497203 JMJD6Q6NYC1 403 aaPredicted RBP4.65□□□□□ -1.67
SMC4-225ENST00000497203 PRIMA1Q86XR5 153 aa4.65□□□□□ -1.67
SMC4-225ENST00000497203 ADGRG3Q86Y34 549 aa4.65□□□□□ -1.67
SMC4-225ENST00000497203 FSTL5Q8N475 847 aaPredicted RBP4.65□□□□□ -1.67
SMC4-225ENST00000497203 PNISRQ8TF01 805 aaKnown RBP4.65□□□□□ -1.67
SMC4-225ENST00000497203 RFKQ969G6 155 aa4.65□□□□□ -1.67
SMC4-225ENST00000497203 RSPRY1Q96DX4 576 aa4.65□□□□□ -1.67
SMC4-225ENST00000497203 ZBTB45Q96K62 511 aaPredicted RBP4.65□□□□□ -1.67
SMC4-225ENST00000497203 ZSCAN31Q96LW9 406 aaPredicted RBP4.65□□□□□ -1.67
SMC4-225ENST00000497203 BBC3Q96PG8 261 aaPredicted RBP4.65□□□□□ -1.67
SMC4-225ENST00000497203 C17orf80Q9BSJ5 609 aa4.65□□□□□ -1.67
SMC4-225ENST00000497203 RTKNQ9BST9 563 aa4.65□□□□□ -1.67
Retrieved 100 of 20,778 RNA–protein pairs in 18.8 ms