RNA–Protein interactions for RNA: ENST00000496567.5

C9orf3-222, Transcript of chromosome 9 open reading frame 3, humanhuman

TSL 5

Gene C9orf3, Length 1,575 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C9orf3-222ENST00000496567 NOTCH4Q99466 2003 aa22.79■■□□□ 1.24
C9orf3-222ENST00000496567 SIGLEC16A6NMB1 481 aa22.79■■□□□ 1.24
C9orf3-222ENST00000496567 MOSPD3O75425 235 aa22.79■■□□□ 1.24
C9orf3-222ENST00000496567 TMEM253P0C7T8 217 aa22.79■■□□□ 1.24
C9orf3-222ENST00000496567 KRT3P12035 628 aa22.79■■□□□ 1.24
C9orf3-222ENST00000496567 PFKLP17858 780 aa22.79■■□□□ 1.24
C9orf3-222ENST00000496567 CBX2Q14781 532 aaPredicted RBP22.79■■□□□ 1.24
C9orf3-222ENST00000496567 HECTD3Q5T447 861 aa22.79■■□□□ 1.24
C9orf3-222ENST00000496567 PLEKHA7Q6IQ23 1121 aa22.79■■□□□ 1.24
C9orf3-222ENST00000496567 HFE2Q6ZVN8 426 aa22.79■■□□□ 1.24
C9orf3-222ENST00000496567 ARCQ7LC44 396 aa22.79■■□□□ 1.24
C9orf3-222ENST00000496567 PHLDB2Q86SQ0 1253 aa22.79■■□□□ 1.24
C9orf3-222ENST00000496567 TXLNBQ8N3L3 684 aa22.79■■□□□ 1.24
C9orf3-222ENST00000496567 MTPAPQ9NVV4 582 aaKnown RBP eCLIP22.79■■□□□ 1.24
C9orf3-222ENST00000496567 CDH22Q9UJ99 828 aa22.79■■□□□ 1.24
C9orf3-222ENST00000496567 DOCK6Q96HP0 2047 aa22.78■■□□□ 1.24
C9orf3-222ENST00000496567 CAPN9O14815 690 aa22.78■■□□□ 1.24
C9orf3-222ENST00000496567 RARGP13631 454 aa22.78■■□□□ 1.24
C9orf3-222ENST00000496567 GJA1P17302 382 aa22.78■■□□□ 1.24
C9orf3-222ENST00000496567 PGFP49763 221 aa22.78■■□□□ 1.24
C9orf3-222ENST00000496567 CYP4F8P98187 520 aa22.78■■□□□ 1.24
C9orf3-222ENST00000496567 TAF5Q15542 800 aa22.78■■□□□ 1.24
C9orf3-222ENST00000496567 LEXMQ3ZCV2 418 aa22.78■■□□□ 1.24
C9orf3-222ENST00000496567 RNF139Q8WU17 664 aa22.78■■□□□ 1.24
C9orf3-222ENST00000496567 PACSIN1Q9BY11 444 aa22.78■■□□□ 1.24
C9orf3-222ENST00000496567 METTL5Q9NRN9 209 aaKnown RBP22.78■■□□□ 1.24
C9orf3-222ENST00000496567 OLA1Q9NTK5 396 aaKnown RBP22.78■■□□□ 1.24
C9orf3-222ENST00000496567 OSER1Q9NX31 292 aa22.78■■□□□ 1.24
C9orf3-222ENST00000496567 MYO1AQ9UBC5 1043 aa22.78■■□□□ 1.24
C9orf3-222ENST00000496567 TMEM59LQ9UK28 342 aa22.78■■□□□ 1.24
C9orf3-222ENST00000496567 BRWD1Q9NSI6 2320 aa22.78■■□□□ 1.24
C9orf3-222ENST00000496567 TCRBV5S1A1TA0A578 114 aa22.77■■□□□ 1.24
C9orf3-222ENST00000496567 ATMINO43313 823 aaPredicted RBP22.77■■□□□ 1.24
C9orf3-222ENST00000496567 MBTPS2O43462 519 aa22.77■■□□□ 1.24
C9orf3-222ENST00000496567 TLR5O60602 858 aa22.77■■□□□ 1.24
C9orf3-222ENST00000496567 GRAP2O75791 330 aa22.77■■□□□ 1.24
C9orf3-222ENST00000496567 CYP1A2P05177 515 aa22.77■■□□□ 1.24
C9orf3-222ENST00000496567 NCAM1P13591 858 aa22.77■■□□□ 1.24
C9orf3-222ENST00000496567 RNASE9P60153 205 aaKnown RBP22.77■■□□□ 1.24
C9orf3-222ENST00000496567 MAMLD1Q13495 774 aa22.77■■□□□ 1.24
C9orf3-222ENST00000496567 TEAD2Q15562 447 aa22.77■■□□□ 1.24
C9orf3-222ENST00000496567 TXNDC8Q6A555 127 aa22.77■■□□□ 1.24
C9orf3-222ENST00000496567 RSRC2Q7L4I2 434 aaKnown RBP22.77■■□□□ 1.24
C9orf3-222ENST00000496567 ACRBPQ8NEB7 543 aa22.77■■□□□ 1.24
C9orf3-222ENST00000496567 ITFG1Q8TB96 612 aa22.77■■□□□ 1.24
C9orf3-222ENST00000496567 KHSRPQ92945 711 aaKnown RBP eCLIP22.77■■□□□ 1.246e-6■■■■□ 21
C9orf3-222ENST00000496567 TASP1Q9H6P5 420 aa22.77■■□□□ 1.24
C9orf3-222ENST00000496567 TRPC7Q9HCX4 862 aa22.77■■□□□ 1.24
C9orf3-222ENST00000496567 OBSL1O75147 1896 aa22.77■■□□□ 1.24
C9orf3-222ENST00000496567 DAB1O75553 588 aa22.76■■□□□ 1.23
C9orf3-222ENST00000496567 OAS1P00973 400 aaKnown RBP22.76■■□□□ 1.23
C9orf3-222ENST00000496567 CEBPBP17676 345 aa22.76■■□□□ 1.23
C9orf3-222ENST00000496567 PUS10Q3MIT2 529 aaKnown RBP22.76■■□□□ 1.23
C9orf3-222ENST00000496567 GPR158Q5T848 1215 aa22.76■■□□□ 1.23
C9orf3-222ENST00000496567 DCUN1D2Q6PH85 259 aa22.76■■□□□ 1.23
C9orf3-222ENST00000496567 GET4Q7L5D6 327 aaPredicted RBP22.76■■□□□ 1.23
C9orf3-222ENST00000496567 EDEM1Q92611 657 aa22.76■■□□□ 1.23
C9orf3-222ENST00000496567 ZNF830Q96NB3 372 aaPredicted RBP22.76■■□□□ 1.23
C9orf3-222ENST00000496567 SLC2A13Q96QE2 648 aa22.76■■□□□ 1.23
C9orf3-222ENST00000496567 KCNF1Q9H3M0 494 aa22.76■■□□□ 1.23
C9orf3-222ENST00000496567 POMKQ9H5K3 350 aa22.76■■□□□ 1.23
C9orf3-222ENST00000496567 SLITRK6Q9H5Y7 841 aa22.76■■□□□ 1.23
C9orf3-222ENST00000496567 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP22.76■■□□□ 1.23
C9orf3-222ENST00000496567 DENND4CQ5VZ89 1909 aa22.76■■□□□ 1.23
C9orf3-222ENST00000496567 C2orf78A6NCI8 922 aa22.76■■□□□ 1.23
C9orf3-222ENST00000496567 GRXCR2A6NFK2 248 aa22.76■■□□□ 1.23
C9orf3-222ENST00000496567 FYNP06241 537 aa22.76■■□□□ 1.23
C9orf3-222ENST00000496567 ATP5C1P36542 298 aaKnown RBP22.76■■□□□ 1.23
C9orf3-222ENST00000496567 PPP1R15BQ5SWA1 713 aa22.76■■□□□ 1.23
C9orf3-222ENST00000496567 KLHDC10Q6PID8 442 aa22.76■■□□□ 1.23
C9orf3-222ENST00000496567 DEFB106AQ8N104 65 aa22.76■■□□□ 1.23
C9orf3-222ENST00000496567 MAB21L3Q8N8X9 362 aa22.76■■□□□ 1.23
C9orf3-222ENST00000496567 ING5Q8WYH8 240 aa22.76■■□□□ 1.23
C9orf3-222ENST00000496567 DESI2Q9BSY9 194 aa22.76■■□□□ 1.23
C9orf3-222ENST00000496567 NACA2Q9H009 215 aa22.76■■□□□ 1.23
C9orf3-222ENST00000496567 CCSER2Q9H7U1 834 aa22.76■■□□□ 1.23
C9orf3-222ENST00000496567 RRN3Q9NYV6 651 aa22.76■■□□□ 1.23
C9orf3-222ENST00000496567 FASTKD2Q9NYY8 710 aaKnown RBP eCLIP22.76■■□□□ 1.23
C9orf3-222ENST00000496567 GDE1Q9NZC3 331 aa22.76■■□□□ 1.23
C9orf3-222ENST00000496567 FAM50BQ9Y247 325 aa22.76■■□□□ 1.23
C9orf3-222ENST00000496567 REXO2Q9Y3B8 237 aaKnown RBP22.76■■□□□ 1.23
C9orf3-222ENST00000496567 ANAPC1Q9H1A4 1944 aa22.75■■□□□ 1.23
C9orf3-222ENST00000496567 TRAV19A0A0A6YYK7 116 aa22.75■■□□□ 1.23
C9orf3-222ENST00000496567 NOS2P35228 1153 aa22.75■■□□□ 1.23
C9orf3-222ENST00000496567 MATKP42679 507 aa22.75■■□□□ 1.23
C9orf3-222ENST00000496567 VAV2P52735 878 aa22.75■■□□□ 1.23
C9orf3-222ENST00000496567 DCAF6Q58WW2 860 aa22.75■■□□□ 1.23
C9orf3-222ENST00000496567 C10orf120Q5SQS8 335 aa22.75■■□□□ 1.23
C9orf3-222ENST00000496567 KIAA1328Q86T90 577 aa22.75■■□□□ 1.23
C9orf3-222ENST00000496567 FGF13Q92913 245 aa22.75■■□□□ 1.23
C9orf3-222ENST00000496567 ARHGEF26Q96DR7 871 aa22.75■■□□□ 1.23
C9orf3-222ENST00000496567 MCEEQ96PE7 176 aa22.75■■□□□ 1.23
C9orf3-222ENST00000496567 UVRAGQ9P2Y5 699 aa22.75■■□□□ 1.23
C9orf3-222ENST00000496567 STAP1Q9ULZ2 295 aa22.75■■□□□ 1.23
C9orf3-222ENST00000496567 NAALADL1Q9UQQ1 740 aa22.75■■□□□ 1.23
C9orf3-222ENST00000496567 ADGRG1Q9Y653 693 aa22.75■■□□□ 1.23
C9orf3-222ENST00000496567 NRG2O14511 850 aaPredicted RBP22.74■■□□□ 1.23
C9orf3-222ENST00000496567 HDCP19113 662 aa22.74■■□□□ 1.23
C9orf3-222ENST00000496567 STXBP5Q5T5C0 1151 aa22.74■■□□□ 1.23
C9orf3-222ENST00000496567 MSANTD2Q6P1R3 559 aa22.74■■□□□ 1.23
Retrieved 100 of 20,778 RNA–protein pairs in 20.2 ms