RNA–Protein interactions for RNA: ENST00000496468.1

TSSC4-210, Transcript of tumor suppressing subtransferable candidate 4, humanhuman

APPRIS ALT2 TSL 1 (best)

Gene TSSC4, Length 912 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSSC4-210ENST00000496468 EFHC1Q5JVL4 640 aa19.22■□□□□ 0.67
TSSC4-210ENST00000496468 HECTD3Q5T447 861 aa19.22■□□□□ 0.67
TSSC4-210ENST00000496468 STXBP5Q5T5C0 1151 aa19.22■□□□□ 0.67
TSSC4-210ENST00000496468 BSPRYQ5W0U4 402 aa19.22■□□□□ 0.67
TSSC4-210ENST00000496468 BTBD8Q5XKL5 378 aa19.22■□□□□ 0.67
TSSC4-210ENST00000496468 PTCRAQ6ISU1 281 aaPredicted RBP19.22■□□□□ 0.67
TSSC4-210ENST00000496468 HFE2Q6ZVN8 426 aa19.22■□□□□ 0.67
TSSC4-210ENST00000496468 RSRC2Q7L4I2 434 aaKnown RBP19.22■□□□□ 0.67
TSSC4-210ENST00000496468 PHLDB2Q86SQ0 1253 aa19.22■□□□□ 0.67
TSSC4-210ENST00000496468 TADA2BQ86TJ2 420 aa19.22■□□□□ 0.67
TSSC4-210ENST00000496468 NPAS3Q8IXF0 933 aa19.22■□□□□ 0.67
TSSC4-210ENST00000496468 MCRS1Q96EZ8 462 aa19.22■□□□□ 0.67
TSSC4-210ENST00000496468 CDK5RAP1Q96SZ6 601 aaKnown RBP19.22■□□□□ 0.67
TSSC4-210ENST00000496468 SELENOOQ9BVL4 669 aa19.22■□□□□ 0.67
TSSC4-210ENST00000496468 NACA2Q9H009 215 aa19.22■□□□□ 0.67
TSSC4-210ENST00000496468 POPDC2Q9HBU9 364 aa19.22■□□□□ 0.67
TSSC4-210ENST00000496468 LUC7LQ9NQ29 371 aaKnown RBP19.22■□□□□ 0.67
TSSC4-210ENST00000496468 OSER1Q9NX31 292 aa19.22■□□□□ 0.67
TSSC4-210ENST00000496468 ZMYM5Q9UJ78 669 aa19.22■□□□□ 0.67
TSSC4-210ENST00000496468 HELZP42694 1942 aaKnown RBP19.21■□□□□ 0.67
TSSC4-210ENST00000496468 TRAV19A0A0A6YYK7 116 aa19.21■□□□□ 0.67
TSSC4-210ENST00000496468 EIF3CLB5ME19 914 aaKnown RBP19.21■□□□□ 0.67
TSSC4-210ENST00000496468 ARHGAP6O43182 974 aa19.21■□□□□ 0.67
TSSC4-210ENST00000496468 GRAP2O75791 330 aa19.21■□□□□ 0.67
TSSC4-210ENST00000496468 OAS1P00973 400 aaKnown RBP19.21■□□□□ 0.67
TSSC4-210ENST00000496468 RARGP13631 454 aa19.21■□□□□ 0.67
TSSC4-210ENST00000496468 TXNDC8Q6A555 127 aa19.21■□□□□ 0.67
TSSC4-210ENST00000496468 GADD45GIP1Q8TAE8 222 aaPredicted RBP19.21■□□□□ 0.67
TSSC4-210ENST00000496468 CTNNBL1Q8WYA6 563 aaPredicted RBP19.21■□□□□ 0.67
TSSC4-210ENST00000496468 FGF13Q92913 245 aa19.21■□□□□ 0.67
TSSC4-210ENST00000496468 PPP1R9BQ96SB3 815 aa19.21■□□□□ 0.67
TSSC4-210ENST00000496468 EIF3CQ99613 913 aaKnown RBP19.21■□□□□ 0.67
TSSC4-210ENST00000496468 THAP2Q9H0W7 228 aa19.21■□□□□ 0.67
TSSC4-210ENST00000496468 TASP1Q9H6P5 420 aa19.21■□□□□ 0.67
TSSC4-210ENST00000496468 CCSER2Q9H7U1 834 aa19.21■□□□□ 0.67
TSSC4-210ENST00000496468 ABCC13Q9NSE7 274 aa19.21■□□□□ 0.67
TSSC4-210ENST00000496468 MTPAPQ9NVV4 582 aaKnown RBP eCLIP19.21■□□□□ 0.67
TSSC4-210ENST00000496468 CNOT8Q9UFF9 292 aaKnown RBP19.21■□□□□ 0.67
TSSC4-210ENST00000496468 CDH7Q9ULB5 785 aa19.21■□□□□ 0.67
TSSC4-210ENST00000496468 EPN1Q9Y6I3 576 aaPredicted RBP19.21■□□□□ 0.67
TSSC4-210ENST00000496468 SCINQ9Y6U3 715 aa19.21■□□□□ 0.67
TSSC4-210ENST00000496468 ANKRD62A6NC57 917 aa19.2■□□□□ 0.66
TSSC4-210ENST00000496468 CAPN9O14815 690 aa19.2■□□□□ 0.66
TSSC4-210ENST00000496468 ZNF263O14978 683 aa19.2■□□□□ 0.66
TSSC4-210ENST00000496468 LCA5LO95447 670 aa19.2■□□□□ 0.66
TSSC4-210ENST00000496468 CKMP06732 381 aa19.2■□□□□ 0.66
TSSC4-210ENST00000496468 H2AFZP0C0S5 128 aa19.2■□□□□ 0.66
TSSC4-210ENST00000496468 NCAM1P13591 858 aa19.2■□□□□ 0.66
TSSC4-210ENST00000496468 PFKLP17858 780 aa19.2■□□□□ 0.66
TSSC4-210ENST00000496468 GBP2P32456 591 aaPredicted RBP19.2■□□□□ 0.66
TSSC4-210ENST00000496468 YWHAZP63104 245 aaKnown RBP19.2■□□□□ 0.66
TSSC4-210ENST00000496468 CCZ1BP86790 482 aa19.2■□□□□ 0.66
TSSC4-210ENST00000496468 CCZ1P86791 482 aaPredicted RBP19.2■□□□□ 0.66
TSSC4-210ENST00000496468 TAF5Q15542 800 aa19.2■□□□□ 0.66
TSSC4-210ENST00000496468 SMAD2Q15796 467 aaKnown RBP19.2■□□□□ 0.66
TSSC4-210ENST00000496468 AAK1Q2M2I8 961 aa19.2■□□□□ 0.66
TSSC4-210ENST00000496468 C10orf120Q5SQS8 335 aa19.2■□□□□ 0.66
TSSC4-210ENST00000496468 C10orf76Q5T2E6 689 aa19.2■□□□□ 0.66
TSSC4-210ENST00000496468 H2AFVQ71UI9 128 aa19.2■□□□□ 0.66
TSSC4-210ENST00000496468 MAB21L3Q8N8X9 362 aa19.2■□□□□ 0.66
TSSC4-210ENST00000496468 RNF139Q8WU17 664 aa19.2■□□□□ 0.66
TSSC4-210ENST00000496468 EDEM1Q92611 657 aa19.2■□□□□ 0.66
TSSC4-210ENST00000496468 SLC2A13Q96QE2 648 aa19.2■□□□□ 0.66
TSSC4-210ENST00000496468 PACSIN1Q9BY11 444 aa19.2■□□□□ 0.66
TSSC4-210ENST00000496468 OLA1Q9NTK5 396 aaKnown RBP19.2■□□□□ 0.66
TSSC4-210ENST00000496468 PARVAQ9NVD7 372 aa19.2■□□□□ 0.66
TSSC4-210ENST00000496468 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP19.2■□□□□ 0.66
TSSC4-210ENST00000496468 GDE1Q9NZC3 331 aa19.2■□□□□ 0.66
TSSC4-210ENST00000496468 MYO1AQ9UBC5 1043 aa19.2■□□□□ 0.66
TSSC4-210ENST00000496468 COL6A3P12111 3177 aa19.19■□□□□ 0.66
TSSC4-210ENST00000496468 COCHO43405 550 aa19.19■□□□□ 0.66
TSSC4-210ENST00000496468 TMEM253P0C7T8 217 aa19.19■□□□□ 0.66
TSSC4-210ENST00000496468 AVPR1AP37288 418 aa19.19■□□□□ 0.66
TSSC4-210ENST00000496468 GALCP54803 685 aa19.19■□□□□ 0.66
TSSC4-210ENST00000496468 BEND5Q7L4P6 421 aa19.19■□□□□ 0.66
TSSC4-210ENST00000496468 OTOP3Q7RTS5 596 aa19.19■□□□□ 0.66
TSSC4-210ENST00000496468 TDRD5Q8NAT2 981 aaKnown RBP19.19■□□□□ 0.66
TSSC4-210ENST00000496468 ACRBPQ8NEB7 543 aa19.19■□□□□ 0.66
TSSC4-210ENST00000496468 MCEEQ96PE7 176 aa19.19■□□□□ 0.66
TSSC4-210ENST00000496468 RASAL2Q9UJF2 1139 aa19.19■□□□□ 0.66
TSSC4-210ENST00000496468 TCRBV5S1A1TA0A578 114 aa19.18■□□□□ 0.66
TSSC4-210ENST00000496468 SOBPA7XYQ1 873 aa19.18■□□□□ 0.66
TSSC4-210ENST00000496468 GJB6O95452 261 aa19.18■□□□□ 0.66
TSSC4-210ENST00000496468 OLFM2O95897 454 aa19.18■□□□□ 0.66
TSSC4-210ENST00000496468 KRT3P12035 628 aa19.18■□□□□ 0.66
TSSC4-210ENST00000496468 SP100P23497 879 aaPredicted RBP19.18■□□□□ 0.66
TSSC4-210ENST00000496468 MAGEA1P43355 309 aa19.18■□□□□ 0.66
TSSC4-210ENST00000496468 RNASE9P60153 205 aaKnown RBP19.18■□□□□ 0.66
TSSC4-210ENST00000496468 GPC5P78333 572 aa19.18■□□□□ 0.66
TSSC4-210ENST00000496468 PLEKHA7Q6IQ23 1121 aa19.18■□□□□ 0.66
TSSC4-210ENST00000496468 MSANTD2Q6P1R3 559 aa19.18■□□□□ 0.66
TSSC4-210ENST00000496468 DCUN1D2Q6PH85 259 aa19.18■□□□□ 0.66
TSSC4-210ENST00000496468 KLHDC10Q6PID8 442 aa19.18■□□□□ 0.66
TSSC4-210ENST00000496468 DEFB106AQ8N104 65 aa19.18■□□□□ 0.66
TSSC4-210ENST00000496468 ARL14EPQ8N8R7 260 aaPredicted RBP19.18■□□□□ 0.66
TSSC4-210ENST00000496468 ZSCAN18Q8TBC5 510 aaPredicted RBP19.18■□□□□ 0.66
TSSC4-210ENST00000496468 ACSF2Q96CM8 615 aaPredicted RBP19.18■□□□□ 0.66
TSSC4-210ENST00000496468 ARHGEF26Q96DR7 871 aa19.18■□□□□ 0.66
TSSC4-210ENST00000496468 MYADMQ96S97 322 aa19.18■□□□□ 0.66
TSSC4-210ENST00000496468 DESI2Q9BSY9 194 aa19.18■□□□□ 0.66
Retrieved 100 of 20,778 RNA–protein pairs in 22.6 ms