RNA–Protein interactions for RNA: ENST00000496205.1

CLK1-214, Transcript of CDC like kinase 1, humanhuman

TSL 2

Gene CLK1, Length 480 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLK1-214ENST00000496205 AMOTQ4VCS5 1084 aa4.41□□□□□ -1.7
CLK1-214ENST00000496205 TMTC4Q5T4D3 741 aa4.41□□□□□ -1.7
CLK1-214ENST00000496205 VPS53Q5VIR6 699 aa4.41□□□□□ -1.7
CLK1-214ENST00000496205 PGBD2Q6P3X8 592 aa4.41□□□□□ -1.7
CLK1-214ENST00000496205 TMEM108Q6UXF1 575 aa4.41□□□□□ -1.7
CLK1-214ENST00000496205 KRT28Q7Z3Y7 464 aa4.41□□□□□ -1.7
CLK1-214ENST00000496205 ZC3H8Q8N5P1 291 aaKnown RBP eCLIP4.41□□□□□ -1.7
CLK1-214ENST00000496205 BPIFB1Q8TDL5 484 aa4.41□□□□□ -1.7
CLK1-214ENST00000496205 SORBS1Q9BX66 1292 aaKnown RBP4.41□□□□□ -1.7
CLK1-214ENST00000496205 SEMA4CQ9C0C4 833 aa4.41□□□□□ -1.7
CLK1-214ENST00000496205 DDX24Q9GZR7 859 aaKnown RBP eCLIP4.41□□□□□ -1.7
CLK1-214ENST00000496205 AGO4Q9HCK5 861 aaKnown RBP4.41□□□□□ -1.7
CLK1-214ENST00000496205 NRIP3Q9NQ35 241 aa4.41□□□□□ -1.7
CLK1-214ENST00000496205 XPNPEP3Q9NQH7 507 aa4.41□□□□□ -1.7
CLK1-214ENST00000496205 MTMR4Q9NYA4 1195 aa4.41□□□□□ -1.7
CLK1-214ENST00000496205 CAPN11Q9UMQ6 739 aa4.41□□□□□ -1.7
CLK1-214ENST00000496205 RAD54BQ9Y620 910 aa4.41□□□□□ -1.7
CLK1-214ENST00000496205 CDY1Q9Y6F8 540 aa4.41□□□□□ -1.7
CLK1-214ENST00000496205 ADGRA2Q96PE1 1338 aa4.41□□□□□ -1.7
CLK1-214ENST00000496205 CNTNAP2Q9UHC6 1331 aa4.41□□□□□ -1.7
CLK1-214ENST00000496205 CACNA1IQ9P0X4 2223 aa4.41□□□□□ -1.7
CLK1-214ENST00000496205 TARM1B6A8C7 271 aa4.4□□□□□ -1.71
CLK1-214ENST00000496205 GCOM1H8Y6P7 765 aaPredicted RBP4.4□□□□□ -1.71
CLK1-214ENST00000496205 AGPSO00116 658 aa4.4□□□□□ -1.71
CLK1-214ENST00000496205 SYT5O00445 386 aa4.4□□□□□ -1.71
CLK1-214ENST00000496205 ASNA1O43681 348 aa4.4□□□□□ -1.71
CLK1-214ENST00000496205 SKAP2O75563 359 aaPredicted RBP4.4□□□□□ -1.71
CLK1-214ENST00000496205 HNRNPCP07910 306 aaKnown RBP eCLIP4.4□□□□□ -1.71
CLK1-214ENST00000496205 ATXN1LP0C7T5 689 aaKnown RBP4.4□□□□□ -1.71
CLK1-214ENST00000496205 CBSLP0DN79 551 aa4.4□□□□□ -1.71
CLK1-214ENST00000496205 KCNA3P22001 575 aa4.4□□□□□ -1.71
CLK1-214ENST00000496205 SFPQP23246 707 aaKnown RBP eCLIP4.4□□□□□ -1.71
CLK1-214ENST00000496205 MST1P26927 711 aa4.4□□□□□ -1.71
CLK1-214ENST00000496205 ATICP31939 592 aa4.4□□□□□ -1.71
CLK1-214ENST00000496205 CBSP35520 551 aa4.4□□□□□ -1.71
CLK1-214ENST00000496205 SERPINF1P36955 418 aa4.4□□□□□ -1.71
CLK1-214ENST00000496205 RGS19P49795 217 aa4.4□□□□□ -1.71
CLK1-214ENST00000496205 COPAP53621 1224 aa4.4□□□□□ -1.71
CLK1-214ENST00000496205 LOXL3P58215 753 aa4.4□□□□□ -1.71
CLK1-214ENST00000496205 PIGFQ07326 219 aa4.4□□□□□ -1.71
CLK1-214ENST00000496205 MYO1EQ12965 1108 aa4.4□□□□□ -1.71
CLK1-214ENST00000496205 POSTNQ15063 836 aa4.4□□□□□ -1.71
CLK1-214ENST00000496205 CEP78Q5JTW2 689 aa4.4□□□□□ -1.71
CLK1-214ENST00000496205 SUMO4Q6EEV6 95 aa4.4□□□□□ -1.71
CLK1-214ENST00000496205 FBXO38Q6PIJ6 1188 aa4.4□□□□□ -1.71
CLK1-214ENST00000496205 CCDC28AQ8IWP9 274 aa4.4□□□□□ -1.71
CLK1-214ENST00000496205 YAF2Q8IY57 180 aa4.4□□□□□ -1.71
CLK1-214ENST00000496205 DNAJB14Q8TBM8 379 aa4.4□□□□□ -1.71
CLK1-214ENST00000496205 STT3BQ8TCJ2 826 aa4.4□□□□□ -1.71
CLK1-214ENST00000496205 DENND1AQ8TEH3 1009 aa4.4□□□□□ -1.71
CLK1-214ENST00000496205 PPM1EQ8WY54 764 aa4.4□□□□□ -1.71
CLK1-214ENST00000496205 TBC1D20Q96BZ9 403 aa4.4□□□□□ -1.71
CLK1-214ENST00000496205 PPP1R9BQ96SB3 815 aa4.4□□□□□ -1.71
CLK1-214ENST00000496205 MAGEB5Q9BZ81 275 aa4.4□□□□□ -1.71
CLK1-214ENST00000496205 SPRTNQ9H040 489 aaPredicted RBP4.4□□□□□ -1.71
CLK1-214ENST00000496205 SIK2Q9H0K1 926 aa4.4□□□□□ -1.71
CLK1-214ENST00000496205 PCDHAC1Q9H158 963 aa4.4□□□□□ -1.71
CLK1-214ENST00000496205 DHX36Q9H2U1 1008 aaKnown RBP4.4□□□□□ -1.71
CLK1-214ENST00000496205 HEYLQ9NQ87 328 aaPredicted RBP4.4□□□□□ -1.71
CLK1-214ENST00000496205 KLC4Q9NSK0 619 aa4.4□□□□□ -1.71
CLK1-214ENST00000496205 LRFN1Q9P244 771 aa4.4□□□□□ -1.71
CLK1-214ENST00000496205 ZMYND8Q9ULU4 1186 aaPredicted RBP4.4□□□□□ -1.71
CLK1-214ENST00000496205 SSX2IPQ9Y2D8 614 aa4.4□□□□□ -1.71
CLK1-214ENST00000496205 LRP12Q9Y561 859 aa4.4□□□□□ -1.71
CLK1-214ENST00000496205 PAXBP1Q9Y5B6 917 aa4.4□□□□□ -1.71
CLK1-214ENST00000496205 HMGB1P1B2RPK0 211 aaPredicted RBP4.39□□□□□ -1.71
CLK1-214ENST00000496205 M0R3H8 397 aa4.39□□□□□ -1.71
CLK1-214ENST00000496205 IPO5O00410 1097 aaKnown RBP4.39□□□□□ -1.71
CLK1-214ENST00000496205 TOR1BO14657 336 aa4.39□□□□□ -1.71
CLK1-214ENST00000496205 PPEF2O14830 753 aa4.39□□□□□ -1.71
CLK1-214ENST00000496205 PCDH17O14917 1159 aa4.39□□□□□ -1.71
CLK1-214ENST00000496205 CCP110O43303 1012 aa4.39□□□□□ -1.71
CLK1-214ENST00000496205 TOP3BO95985 862 aaKnown RBP4.39□□□□□ -1.71
CLK1-214ENST00000496205 RHOP08100 348 aa4.39□□□□□ -1.71
CLK1-214ENST00000496205 ARP10275 920 aa4.39□□□□□ -1.71
CLK1-214ENST00000496205 HGFP14210 728 aa4.39□□□□□ -1.71
CLK1-214ENST00000496205 EGR1P18146 543 aa4.39□□□□□ -1.71
CLK1-214ENST00000496205 DRD4P21917 467 aa4.39□□□□□ -1.71
CLK1-214ENST00000496205 ADORA2AP29274 412 aa4.39□□□□□ -1.71
CLK1-214ENST00000496205 NTSR1P30989 418 aa4.39□□□□□ -1.71
CLK1-214ENST00000496205 ANXA11P50995 505 aaKnown RBP4.39□□□□□ -1.71
CLK1-214ENST00000496205 DGKEP52429 567 aa4.39□□□□□ -1.71
CLK1-214ENST00000496205 PNLIPRP1P54315 467 aa4.39□□□□□ -1.71
CLK1-214ENST00000496205 PTK2BQ14289 1009 aa4.39□□□□□ -1.71
CLK1-214ENST00000496205 PDCD2Q16342 344 aaPredicted RBP4.39□□□□□ -1.71
CLK1-214ENST00000496205 ZNF750Q32MQ0 723 aa4.39□□□□□ -1.71
CLK1-214ENST00000496205 MANEALQ5VSG8 457 aa4.39□□□□□ -1.71
CLK1-214ENST00000496205 CACHD1Q5VU97 1274 aa4.39□□□□□ -1.71
CLK1-214ENST00000496205 SLC18B1Q6NT16 456 aa4.39□□□□□ -1.71
CLK1-214ENST00000496205 SLC2A7Q6PXP3 512 aa4.39□□□□□ -1.71
CLK1-214ENST00000496205 SDR16C5Q8N3Y7 309 aa4.39□□□□□ -1.71
CLK1-214ENST00000496205 FAM109AQ8N4B1 249 aa4.39□□□□□ -1.71
CLK1-214ENST00000496205 FAM71BQ8TC56 605 aa4.39□□□□□ -1.71
CLK1-214ENST00000496205 TMEM171Q8WVE6 324 aa4.39□□□□□ -1.71
CLK1-214ENST00000496205 CCT6BQ92526 530 aa4.39□□□□□ -1.71
CLK1-214ENST00000496205 RFKQ969G6 155 aa4.39□□□□□ -1.71
CLK1-214ENST00000496205 SNX27Q96L92 541 aa4.39□□□□□ -1.71
CLK1-214ENST00000496205 TMEM120AQ9BXJ8 343 aa4.39□□□□□ -1.71
CLK1-214ENST00000496205 MYLK2Q9H1R3 596 aa4.39□□□□□ -1.71
CLK1-214ENST00000496205 MLXIPQ9HAP2 919 aa4.39□□□□□ -1.71
Retrieved 100 of 20,778 RNA–protein pairs in 19.3 ms