RNA–Protein interactions for RNA: ENST00000495756.5

ATG3-208, Transcript of autophagy related 3, humanhuman

TSL 1 (best)

Gene ATG3, Length 1,455 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATG3-208ENST00000495756 FYNP06241 537 aa20.4■□□□□ 0.86
ATG3-208ENST00000495756 CDC25CP30307 473 aa20.4■□□□□ 0.86
ATG3-208ENST00000495756 CCR2P41597 374 aa20.4■□□□□ 0.86
ATG3-208ENST00000495756 BEND5Q7L4P6 421 aa20.4■□□□□ 0.86
ATG3-208ENST00000495756 ARCQ7LC44 396 aa20.4■□□□□ 0.86
ATG3-208ENST00000495756 RFFLQ8WZ73 363 aa20.4■□□□□ 0.86
ATG3-208ENST00000495756 TRIM44Q96DX7 344 aaPredicted RBP20.4■□□□□ 0.86
ATG3-208ENST00000495756 GCNAQ96QF7 691 aa20.4■□□□□ 0.86
ATG3-208ENST00000495756 NUP85Q9BW27 656 aa20.4■□□□□ 0.86
ATG3-208ENST00000495756 ABCC13Q9NSE7 274 aa20.4■□□□□ 0.86
ATG3-208ENST00000495756 UVRAGQ9P2Y5 699 aa20.4■□□□□ 0.86
ATG3-208ENST00000495756 A0A0U1RQJ8 604 aa20.39■□□□□ 0.85
ATG3-208ENST00000495756 A0A1W2PRU2 124 aa20.39■□□□□ 0.85
ATG3-208ENST00000495756 ABL1P00519 1130 aa20.39■□□□□ 0.85
ATG3-208ENST00000495756 RFC1P35251 1148 aaPredicted RBP20.39■□□□□ 0.85
ATG3-208ENST00000495756 RPL7AP62424 266 aaKnown RBP20.39■□□□□ 0.85
ATG3-208ENST00000495756 KIF5AQ12840 1032 aa20.39■□□□□ 0.85
ATG3-208ENST00000495756 SLC5A9Q2M3M2 681 aa20.39■□□□□ 0.85
ATG3-208ENST00000495756 PRSS36Q5K4E3 855 aa20.39■□□□□ 0.85
ATG3-208ENST00000495756 BTBD8Q5XKL5 378 aa20.39■□□□□ 0.85
ATG3-208ENST00000495756 CES5AQ6NT32 575 aa20.39■□□□□ 0.85
ATG3-208ENST00000495756 DCUN1D2Q6PH85 259 aa20.39■□□□□ 0.85
ATG3-208ENST00000495756 EMC1Q8N766 993 aa20.39■□□□□ 0.85
ATG3-208ENST00000495756 JOSD2Q8TAC2 188 aa20.39■□□□□ 0.85
ATG3-208ENST00000495756 SLC35G2Q8TBE7 412 aa20.39■□□□□ 0.85
ATG3-208ENST00000495756 ATRIPQ8WXE1 791 aa20.39■□□□□ 0.85
ATG3-208ENST00000495756 EDEM1Q92611 657 aa20.39■□□□□ 0.85
ATG3-208ENST00000495756 MCEEQ96PE7 176 aa20.39■□□□□ 0.85
ATG3-208ENST00000495756 SLC2A13Q96QE2 648 aa20.39■□□□□ 0.85
ATG3-208ENST00000495756 ATXN3LQ9H3M9 355 aa20.39■□□□□ 0.85
ATG3-208ENST00000495756 MTPAPQ9NVV4 582 aaKnown RBP eCLIP20.39■□□□□ 0.85
ATG3-208ENST00000495756 CTTNBP2NLQ9P2B4 639 aa20.39■□□□□ 0.85
ATG3-208ENST00000495756 COG5Q9UP83 839 aa20.39■□□□□ 0.85
ATG3-208ENST00000495756 C5orf42Q9H799 3197 aa20.39■□□□□ 0.85
ATG3-208ENST00000495756 OBSL1O75147 1896 aa20.38■□□□□ 0.85
ATG3-208ENST00000495756 TMEM191CA6NGB0 347 aa20.38■□□□□ 0.85
ATG3-208ENST00000495756 NRG2O14511 850 aaPredicted RBP20.38■□□□□ 0.85
ATG3-208ENST00000495756 DAB1O75553 588 aa20.38■□□□□ 0.85
ATG3-208ENST00000495756 RARGP13631 454 aa20.38■□□□□ 0.85
ATG3-208ENST00000495756 FLT3P36888 993 aa20.38■□□□□ 0.85
ATG3-208ENST00000495756 TCEAL1Q15170 157 aa20.38■□□□□ 0.85
ATG3-208ENST00000495756 SKIV2LQ15477 1246 aaKnown RBP20.38■□□□□ 0.85
ATG3-208ENST00000495756 RHOT2Q8IXI1 618 aa20.38■□□□□ 0.85
ATG3-208ENST00000495756 DEFB106AQ8N104 65 aa20.38■□□□□ 0.85
ATG3-208ENST00000495756 SHKBP1Q8TBC3 707 aa20.38■□□□□ 0.85
ATG3-208ENST00000495756 PPM1EQ8WY54 764 aa20.38■□□□□ 0.85
ATG3-208ENST00000495756 TCEAL4Q96EI5 215 aa20.38■□□□□ 0.85
ATG3-208ENST00000495756 CDH22Q9UJ99 828 aa20.38■□□□□ 0.85
ATG3-208ENST00000495756 NAALADL1Q9UQQ1 740 aa20.38■□□□□ 0.85
ATG3-208ENST00000495756 DUSP10Q9Y6W6 482 aa20.38■□□□□ 0.85
ATG3-208ENST00000495756 DENND4CQ5VZ89 1909 aa20.38■□□□□ 0.85
ATG3-208ENST00000495756 ANAPC1Q9H1A4 1944 aa20.38■□□□□ 0.85
ATG3-208ENST00000495756 A0A0A6YYK5 440 aaPredicted RBP20.37■□□□□ 0.85
ATG3-208ENST00000495756 C2CD4BA6NLJ0 364 aa20.37■□□□□ 0.85
ATG3-208ENST00000495756 BTNL10A8MVZ5 291 aa20.37■□□□□ 0.85
ATG3-208ENST00000495756 ZNF197O14709 1029 aa20.37■□□□□ 0.85
ATG3-208ENST00000495756 CAPN9O14815 690 aa20.37■□□□□ 0.85
ATG3-208ENST00000495756 MOSPD3O75425 235 aa20.37■□□□□ 0.85
ATG3-208ENST00000495756 RALAP11233 206 aa20.37■□□□□ 0.85
ATG3-208ENST00000495756 NCAM1P13591 858 aa20.37■□□□□ 0.85
ATG3-208ENST00000495756 GJA1P17302 382 aa20.37■□□□□ 0.85
ATG3-208ENST00000495756 MATKP42679 507 aa20.37■□□□□ 0.85
ATG3-208ENST00000495756 TUBP50607 506 aa20.37■□□□□ 0.85
ATG3-208ENST00000495756 DCAF6Q58WW2 860 aa20.37■□□□□ 0.85
ATG3-208ENST00000495756 ATAT1Q5SQI0 421 aa20.37■□□□□ 0.85
ATG3-208ENST00000495756 SYPL2Q5VXT5 272 aa20.37■□□□□ 0.85
ATG3-208ENST00000495756 TRNP1Q6NT89 227 aa20.37■□□□□ 0.85
ATG3-208ENST00000495756 ZNF662Q6ZS27 426 aa20.37■□□□□ 0.85
ATG3-208ENST00000495756 ZNF276Q8N554 614 aa20.37■□□□□ 0.85
ATG3-208ENST00000495756 ZNF564Q8TBZ8 553 aaPredicted RBP20.37■□□□□ 0.85
ATG3-208ENST00000495756 MRPS31Q92665 395 aaKnown RBP20.37■□□□□ 0.85
ATG3-208ENST00000495756 TRIM7Q9C029 511 aa20.37■□□□□ 0.85
ATG3-208ENST00000495756 CCSER2Q9H7U1 834 aa20.37■□□□□ 0.85
ATG3-208ENST00000495756 WDR6Q9NNW5 1121 aaKnown RBP20.37■□□□□ 0.85
ATG3-208ENST00000495756 OSGEPQ9NPF4 335 aa20.37■□□□□ 0.85
ATG3-208ENST00000495756 FASTKD2Q9NYY8 710 aaKnown RBP eCLIP20.37■□□□□ 0.85
ATG3-208ENST00000495756 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP20.37■□□□□ 0.85
ATG3-208ENST00000495756 ZSCAN12O43309 604 aa20.37■□□□□ 0.85
ATG3-208ENST00000495756 TLR5O60602 858 aa20.37■□□□□ 0.85
ATG3-208ENST00000495756 MTA2O94776 668 aa20.37■□□□□ 0.85
ATG3-208ENST00000495756 CYP4F8P98187 520 aa20.37■□□□□ 0.85
ATG3-208ENST00000495756 CLUL1Q15846 466 aa20.37■□□□□ 0.85
ATG3-208ENST00000495756 HECTD3Q5T447 861 aa20.37■□□□□ 0.85
ATG3-208ENST00000495756 RSRC2Q7L4I2 434 aaKnown RBP20.37■□□□□ 0.85
ATG3-208ENST00000495756 SMRP1Q8NCR6 262 aa20.37■□□□□ 0.85
ATG3-208ENST00000495756 RXFP2Q8WXD0 754 aa20.37■□□□□ 0.85
ATG3-208ENST00000495756 DDX23Q9BUQ8 820 aaKnown RBP20.37■□□□□ 0.85
ATG3-208ENST00000495756 TSGA10Q9BZW7 698 aa20.37■□□□□ 0.85
ATG3-208ENST00000495756 UBE2ZQ9H832 354 aaPredicted RBP20.37■□□□□ 0.85
ATG3-208ENST00000495756 TRIM10Q9UDY6 481 aa20.37■□□□□ 0.85
ATG3-208ENST00000495756 CD207Q9UJ71 328 aa20.37■□□□□ 0.85
ATG3-208ENST00000495756 SALL4Q9UJQ4 1053 aa20.37■□□□□ 0.85
ATG3-208ENST00000495756 NUDT5Q9UKK9 219 aa20.37■□□□□ 0.85
ATG3-208ENST00000495756 MRPS23Q9Y3D9 190 aaKnown RBP20.37■□□□□ 0.85
ATG3-208ENST00000495756 C2orf78A6NCI8 922 aa20.36■□□□□ 0.85
ATG3-208ENST00000495756 H3BQ06 376 aaPredicted RBP20.36■□□□□ 0.85
ATG3-208ENST00000495756 OAS1P00973 400 aaKnown RBP20.36■□□□□ 0.85
ATG3-208ENST00000495756 PDGFRAP16234 1089 aa20.36■□□□□ 0.85
ATG3-208ENST00000495756 KCNA5P22460 613 aa20.36■□□□□ 0.85
ATG3-208ENST00000495756 NOS2P35228 1153 aa20.36■□□□□ 0.85
Retrieved 100 of 20,778 RNA–protein pairs in 16.7 ms