RNA–Protein interactions for RNA: ENST00000495528.1

VIM-207, Transcript of vimentin, humanhuman

TSL 2

Gene VIM, Length 962 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VIM-207ENST00000495528 ALX1Q15699 326 aa7.36□□□□□ -1.23
VIM-207ENST00000495528 LY6KQ17RY6 165 aa7.36□□□□□ -1.23
VIM-207ENST00000495528 TCTN1Q2MV58 587 aa7.36□□□□□ -1.23
VIM-207ENST00000495528 LCE4AQ5TA78 99 aa7.36□□□□□ -1.23
VIM-207ENST00000495528 SEPT14Q6ZU15 432 aa7.36□□□□□ -1.23
VIM-207ENST00000495528 ADGRE4PQ86SQ3 457 aa7.36□□□□□ -1.23
VIM-207ENST00000495528 ZBTB46Q86UZ6 589 aa7.36□□□□□ -1.23
VIM-207ENST00000495528 FUKQ8N0W3 1084 aa7.36□□□□□ -1.23
VIM-207ENST00000495528 DNERQ8NFT8 737 aa7.36□□□□□ -1.23
VIM-207ENST00000495528 OR5M3Q8NGP4 307 aa7.36□□□□□ -1.23
VIM-207ENST00000495528 CXorf38Q8TB03 319 aa7.36□□□□□ -1.23
VIM-207ENST00000495528 GDPD5Q8WTR4 605 aa7.36□□□□□ -1.23
VIM-207ENST00000495528 AFG1LQ8WV93 481 aa7.36□□□□□ -1.23
VIM-207ENST00000495528 KAT2BQ92831 832 aa7.36□□□□□ -1.23
VIM-207ENST00000495528 EVI5LQ96CN4 794 aa7.36□□□□□ -1.23
VIM-207ENST00000495528 ADI1Q9BV57 179 aa7.36□□□□□ -1.23
VIM-207ENST00000495528 UBA5Q9GZZ9 404 aa7.36□□□□□ -1.23
VIM-207ENST00000495528 CPVLQ9H3G5 476 aa7.36□□□□□ -1.23
VIM-207ENST00000495528 GBF1Q92538 1859 aa7.36□□□□□ -1.23
VIM-207ENST00000495528 LRRC37A2A6NM11 1700 aa7.35□□□□□ -1.23
VIM-207ENST00000495528 B4DLN1 442 aa7.35□□□□□ -1.23
VIM-207ENST00000495528 K7ESM1 405 aa7.35□□□□□ -1.23
VIM-207ENST00000495528 NBNO60934 754 aa7.35□□□□□ -1.23
VIM-207ENST00000495528 MMP3P08254 477 aa7.35□□□□□ -1.23
VIM-207ENST00000495528 GOLGA8HP0CJ92 632 aa7.35□□□□□ -1.23
VIM-207ENST00000495528 SNHG28P0DPA3 235 aa7.35□□□□□ -1.23
VIM-207ENST00000495528 MRPL12P52815 198 aaKnown RBP7.35□□□□□ -1.23
VIM-207ENST00000495528 HAND2P61296 217 aa7.35□□□□□ -1.23
VIM-207ENST00000495528 DUSP2Q05923 314 aa7.35□□□□□ -1.23
VIM-207ENST00000495528 ARHGAP1Q07960 439 aa7.35□□□□□ -1.23
VIM-207ENST00000495528 DUSP8Q13202 625 aa7.35□□□□□ -1.23
VIM-207ENST00000495528 GRM7Q14831 915 aa7.35□□□□□ -1.23
VIM-207ENST00000495528 NOMO1Q15155 1222 aa7.35□□□□□ -1.23
VIM-207ENST00000495528 USH1GQ495M9 461 aa7.35□□□□□ -1.23
VIM-207ENST00000495528 GAGE13Q4V321 117 aa7.35□□□□□ -1.23
VIM-207ENST00000495528 BMP2KLQ5H9B9 411 aa7.35□□□□□ -1.23
VIM-207ENST00000495528 TMEM31Q5JXX7 168 aa7.35□□□□□ -1.23
VIM-207ENST00000495528 CHST3Q7LGC8 479 aa7.35□□□□□ -1.23
VIM-207ENST00000495528 SESTD1Q86VW0 696 aa7.35□□□□□ -1.23
VIM-207ENST00000495528 CMTM4Q8IZR5 234 aa7.35□□□□□ -1.23
VIM-207ENST00000495528 CAGE1Q8TC20 777 aa7.35□□□□□ -1.23
VIM-207ENST00000495528 AFAP1L1Q8TED9 768 aa7.35□□□□□ -1.23
VIM-207ENST00000495528 SNX33Q8WV41 574 aa7.35□□□□□ -1.23
VIM-207ENST00000495528 ARL8AQ96BM9 186 aa7.35□□□□□ -1.23
VIM-207ENST00000495528 TEKT5Q96M29 485 aa7.35□□□□□ -1.23
VIM-207ENST00000495528 FAM227BQ96M60 508 aa7.35□□□□□ -1.23
VIM-207ENST00000495528 TTC14Q96N46 770 aa7.35□□□□□ -1.23
VIM-207ENST00000495528 TAAR1Q96RJ0 339 aa7.35□□□□□ -1.23
VIM-207ENST00000495528 MPHOSPH6Q99547 160 aaKnown RBP7.35□□□□□ -1.23
VIM-207ENST00000495528 AASDHPPTQ9NRN7 309 aa7.35□□□□□ -1.23
VIM-207ENST00000495528 HELLSQ9NRZ9 838 aa7.35□□□□□ -1.23
VIM-207ENST00000495528 COL20A1Q9P218 1284 aa7.35□□□□□ -1.23
VIM-207ENST00000495528 ST6GALNAC2Q9UJ37 374 aa7.35□□□□□ -1.23
VIM-207ENST00000495528 PNMA2Q9UL42 364 aa7.35□□□□□ -1.23
VIM-207ENST00000495528 MTUS1Q9ULD2 1270 aa7.35□□□□□ -1.23
VIM-207ENST00000495528 XIRP2A4UGR9 3374 aa7.35□□□□□ -1.23
VIM-207ENST00000495528 SCN5AQ14524 2016 aa7.35□□□□□ -1.23
VIM-207ENST00000495528 LCTP09848 1927 aa7.35□□□□□ -1.23
VIM-207ENST00000495528 WDR19Q8NEZ3 1342 aa7.34□□□□□ -1.23
VIM-207ENST00000495528 SCN10AQ9Y5Y9 1956 aa7.34□□□□□ -1.23
VIM-207ENST00000495528 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP7.34□□□□□ -1.23
VIM-207ENST00000495528 A0A0D9SFI3 127 aa7.34□□□□□ -1.23
VIM-207ENST00000495528 LINC01553A4QN01 128 aa7.34□□□□□ -1.23
VIM-207ENST00000495528 NDUFS2O75306 463 aa7.34□□□□□ -1.23
VIM-207ENST00000495528 SNUPNO95149 360 aaKnown RBP7.34□□□□□ -1.23
VIM-207ENST00000495528 GJB5O95377 273 aa7.34□□□□□ -1.23
VIM-207ENST00000495528 GH1P01241 217 aa7.34□□□□□ -1.23
VIM-207ENST00000495528 CXCL10P02778 98 aa7.34□□□□□ -1.23
VIM-207ENST00000495528 HSPD1P10809 573 aaKnown RBP7.34□□□□□ -1.23
VIM-207ENST00000495528 CKBP12277 381 aa7.34□□□□□ -1.23
VIM-207ENST00000495528 CASTP20810 708 aaKnown RBP7.34□□□□□ -1.23
VIM-207ENST00000495528 C5AR1P21730 350 aa7.34□□□□□ -1.23
VIM-207ENST00000495528 MSX2P35548 267 aaPredicted RBP7.34□□□□□ -1.23
VIM-207ENST00000495528 RPS19P39019 145 aaKnown RBP7.34□□□□□ -1.23
VIM-207ENST00000495528 NEK2P51955 445 aa7.34□□□□□ -1.23
VIM-207ENST00000495528 NPEPPSP55786 919 aa7.34□□□□□ -1.23
VIM-207ENST00000495528 MEF2AQ02078 507 aaPredicted RBP7.34□□□□□ -1.23
VIM-207ENST00000495528 MALLQ13021 153 aa7.34□□□□□ -1.23
VIM-207ENST00000495528 ICAM4Q14773 271 aa7.34□□□□□ -1.23
VIM-207ENST00000495528 MCMDC2Q4G0Z9 681 aa7.34□□□□□ -1.23
VIM-207ENST00000495528 LRRC8DQ7L1W4 858 aa7.34□□□□□ -1.23
VIM-207ENST00000495528 ZNF589Q86UQ0 364 aaPredicted RBP7.34□□□□□ -1.23
VIM-207ENST00000495528 GPR156Q8NFN8 814 aa7.34□□□□□ -1.23
VIM-207ENST00000495528 RAD9AQ99638 391 aa7.34□□□□□ -1.23
VIM-207ENST00000495528 TCF25Q9BQ70 676 aa7.34□□□□□ -1.23
VIM-207ENST00000495528 EPC1Q9H2F5 836 aa7.34□□□□□ -1.23
VIM-207ENST00000495528 PLA2G3Q9NZ20 509 aa7.34□□□□□ -1.23
VIM-207ENST00000495528 HDAC6Q9UBN7 1215 aa7.34□□□□□ -1.23
VIM-207ENST00000495528 TUBD1Q9UJT1 453 aa7.34□□□□□ -1.23
VIM-207ENST00000495528 TET1Q8NFU7 2136 aa7.34□□□□□ -1.23
VIM-207ENST00000495528 ABHD14A-ACY1A0A1B0GW23 586 aa7.33□□□□□ -1.24
VIM-207ENST00000495528 PI4K2BG5E9Z4 385 aa7.33□□□□□ -1.24
VIM-207ENST00000495528 HAS3O00219 553 aa7.33□□□□□ -1.24
VIM-207ENST00000495528 MTSS1O43312 755 aa7.33□□□□□ -1.24
VIM-207ENST00000495528 PARNO95453 639 aaKnown RBP7.33□□□□□ -1.24
VIM-207ENST00000495528 CHMLP26374 656 aa7.33□□□□□ -1.24
VIM-207ENST00000495528 STXBP2Q15833 593 aa7.33□□□□□ -1.24
VIM-207ENST00000495528 CDC37Q16543 378 aaPredicted RBP7.33□□□□□ -1.24
VIM-207ENST00000495528 TRIM71Q2Q1W2 868 aaKnown RBP7.33□□□□□ -1.24
VIM-207ENST00000495528 ANO4Q32M45 955 aa7.33□□□□□ -1.24
Retrieved 100 of 20,778 RNA–protein pairs in 35.2 ms