RNA–Protein interactions for RNA: ENST00000495497.1

HDAC4-212, Transcript of histone deacetylase 4, humanhuman

TSL 5

Gene HDAC4, Length 849 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC4-212ENST00000495497 ASIC4Q96FT7 647 aa20.38■□□□□ 0.85
HDAC4-212ENST00000495497 PIWIL1Q96J94 861 aaKnown RBP20.38■□□□□ 0.85
HDAC4-212ENST00000495497 AGPAT1Q99943 283 aa20.38■□□□□ 0.85
HDAC4-212ENST00000495497 TRIM5Q9C035 493 aa20.38■□□□□ 0.85
HDAC4-212ENST00000495497 BRD9Q9H8M2 597 aa20.38■□□□□ 0.85
HDAC4-212ENST00000495497 KIF9Q9HAQ2 790 aa20.38■□□□□ 0.85
HDAC4-212ENST00000495497 A0A1W2PQJ5 194 aa20.37■□□□□ 0.85
HDAC4-212ENST00000495497 ZNF263O14978 683 aa20.37■□□□□ 0.85
HDAC4-212ENST00000495497 CYP1A1P04798 512 aaPredicted RBP20.37■□□□□ 0.85
HDAC4-212ENST00000495497 IRF1P10914 325 aa20.37■□□□□ 0.85
HDAC4-212ENST00000495497 SKILP12757 684 aa20.37■□□□□ 0.85
HDAC4-212ENST00000495497 CASP14P31944 242 aa20.37■□□□□ 0.85
HDAC4-212ENST00000495497 NOMO3P69849 1222 aa20.37■□□□□ 0.85
HDAC4-212ENST00000495497 EFEMP1Q12805 493 aa20.37■□□□□ 0.85
HDAC4-212ENST00000495497 TAF5Q15542 800 aa20.37■□□□□ 0.85
HDAC4-212ENST00000495497 C2CD6Q53TS8 623 aa20.37■□□□□ 0.85
HDAC4-212ENST00000495497 TRIM68Q6AZZ1 485 aa20.37■□□□□ 0.85
HDAC4-212ENST00000495497 OR6B2Q6IFH4 312 aa20.37■□□□□ 0.85
HDAC4-212ENST00000495497 SARM1Q6SZW1 724 aa20.37■□□□□ 0.85
HDAC4-212ENST00000495497 FAM183BPQ6ZVS7 135 aa20.37■□□□□ 0.85
HDAC4-212ENST00000495497 TTC8Q8TAM2 541 aa20.37■□□□□ 0.85
HDAC4-212ENST00000495497 IRGQQ8WZA9 623 aa20.37■□□□□ 0.85
HDAC4-212ENST00000495497 NOX5Q96PH1 765 aa20.37■□□□□ 0.85
HDAC4-212ENST00000495497 KLF16Q9BXK1 252 aaPredicted RBP20.37■□□□□ 0.85
HDAC4-212ENST00000495497 SEPT11Q9NVA2 429 aaKnown RBP20.37■□□□□ 0.85
HDAC4-212ENST00000495497 AIPL1Q9NZN9 384 aa20.37■□□□□ 0.85
HDAC4-212ENST00000495497 CFAP97Q9P2B7 532 aa20.37■□□□□ 0.85
HDAC4-212ENST00000495497 RASAL2Q9UJF2 1139 aa20.37■□□□□ 0.85
HDAC4-212ENST00000495497 CAPN11Q9UMQ6 739 aa20.37■□□□□ 0.85
HDAC4-212ENST00000495497 NUP210Q8TEM1 1887 aaPredicted RBP20.37■□□□□ 0.85
HDAC4-212ENST00000495497 LSM8O95777 96 aaKnown RBP20.36■□□□□ 0.85
HDAC4-212ENST00000495497 LTFP02788 710 aa20.36■□□□□ 0.85
HDAC4-212ENST00000495497 MTF1Q14872 753 aa20.36■□□□□ 0.85
HDAC4-212ENST00000495497 SPECC1LQ69YQ0 1117 aa20.36■□□□□ 0.85
HDAC4-212ENST00000495497 RSRC2Q7L4I2 434 aaKnown RBP20.36■□□□□ 0.85
HDAC4-212ENST00000495497 MIB1Q86YT6 1006 aa20.36■□□□□ 0.85
HDAC4-212ENST00000495497 SLC30A5Q8TAD4 765 aa20.36■□□□□ 0.85
HDAC4-212ENST00000495497 OLIG1Q8TAK6 271 aa20.36■□□□□ 0.85
HDAC4-212ENST00000495497 FAM149B1Q96BN6 582 aa20.36■□□□□ 0.85
HDAC4-212ENST00000495497 LINC00597Q9H2U6 94 aa20.36■□□□□ 0.85
HDAC4-212ENST00000495497 HAUS4Q9H6D7 363 aa20.36■□□□□ 0.85
HDAC4-212ENST00000495497 SYNCQ9H7C4 482 aa20.36■□□□□ 0.85
HDAC4-212ENST00000495497 SLC2A4RGQ9NR83 387 aa20.36■□□□□ 0.85
HDAC4-212ENST00000495497 ABCC13Q9NSE7 274 aa20.36■□□□□ 0.85
HDAC4-212ENST00000495497 DNMT3LQ9UJW3 386 aa20.36■□□□□ 0.85
HDAC4-212ENST00000495497 CA14Q9ULX7 337 aa20.36■□□□□ 0.85
HDAC4-212ENST00000495497 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP20.36■□□□□ 0.85
HDAC4-212ENST00000495497 CHADO15335 359 aa20.35■□□□□ 0.85
HDAC4-212ENST00000495497 FYNP06241 537 aa20.35■□□□□ 0.85
HDAC4-212ENST00000495497 HMBSP08397 361 aa20.35■□□□□ 0.85
HDAC4-212ENST00000495497 CCDC172P0C7W6 258 aa20.35■□□□□ 0.85
HDAC4-212ENST00000495497 ZBED6P86452 979 aa20.35■□□□□ 0.85
HDAC4-212ENST00000495497 TNK2Q07912 1038 aa20.35■□□□□ 0.85
HDAC4-212ENST00000495497 GOLGA8FQ08AF8 430 aa20.35■□□□□ 0.85
HDAC4-212ENST00000495497 SIGLEC14Q08ET2 396 aa20.35■□□□□ 0.85
HDAC4-212ENST00000495497 GOLGA8DPQ0D2H9 430 aa20.35■□□□□ 0.85
HDAC4-212ENST00000495497 TRIM67Q6ZTA4 783 aa20.35■□□□□ 0.85
HDAC4-212ENST00000495497 ERICH1Q86X53 443 aa20.35■□□□□ 0.85
HDAC4-212ENST00000495497 ZNF276Q8N554 614 aa20.35■□□□□ 0.85
HDAC4-212ENST00000495497 IPO4Q8TEX9 1081 aaKnown RBP20.35■□□□□ 0.85
HDAC4-212ENST00000495497 ANP32EQ9BTT0 268 aa20.35■□□□□ 0.85
HDAC4-212ENST00000495497 THG1LQ9NWX6 298 aaKnown RBP20.35■□□□□ 0.85
HDAC4-212ENST00000495497 SFMBT1Q9UHJ3 866 aa20.35■□□□□ 0.85
HDAC4-212ENST00000495497 FBXL21Q9UKT6 434 aa20.35■□□□□ 0.85
HDAC4-212ENST00000495497 LUC7L2Q9Y383 392 aaKnown RBP20.35■□□□□ 0.85
HDAC4-212ENST00000495497 WNT6Q9Y6F9 365 aa20.35■□□□□ 0.85
HDAC4-212ENST00000495497 FAM86C2PA6NEL3 165 aa20.34■□□□□ 0.85
HDAC4-212ENST00000495497 ARNTLO00327 626 aa20.34■□□□□ 0.85
HDAC4-212ENST00000495497 GRAP2O75791 330 aa20.34■□□□□ 0.85
HDAC4-212ENST00000495497 UNGP13051 313 aaPredicted RBP20.34■□□□□ 0.85
HDAC4-212ENST00000495497 ARSAP15289 507 aa20.34■□□□□ 0.85
HDAC4-212ENST00000495497 TCF3P15923 654 aa20.34■□□□□ 0.85
HDAC4-212ENST00000495497 CLEC16AQ2KHT3 1053 aa20.34■□□□□ 0.85
HDAC4-212ENST00000495497 ARHGAP29Q52LW3 1261 aa20.34■□□□□ 0.85
HDAC4-212ENST00000495497 CC2D1AQ6P1N0 951 aaPredicted RBP20.34■□□□□ 0.85
HDAC4-212ENST00000495497 KLHDC10Q6PID8 442 aa20.34■□□□□ 0.85
HDAC4-212ENST00000495497 ZNF571Q7Z3V5 609 aaPredicted RBP20.34■□□□□ 0.85
HDAC4-212ENST00000495497 PHLDB2Q86SQ0 1253 aa20.34■□□□□ 0.85
HDAC4-212ENST00000495497 TADA2BQ86TJ2 420 aa20.34■□□□□ 0.85
HDAC4-212ENST00000495497 ZNF397Q8NF99 534 aaPredicted RBP20.34■□□□□ 0.85
HDAC4-212ENST00000495497 RNF139Q8WU17 664 aa20.34■□□□□ 0.85
HDAC4-212ENST00000495497 GOLGA1Q92805 767 aa20.34■□□□□ 0.85
HDAC4-212ENST00000495497 IRF7Q92985 503 aa20.34■□□□□ 0.85
HDAC4-212ENST00000495497 CDK5RAP1Q96SZ6 601 aaKnown RBP20.34■□□□□ 0.85
HDAC4-212ENST00000495497 FAM83CQ9BQN1 747 aa20.34■□□□□ 0.85
HDAC4-212ENST00000495497 SYT11Q9BT88 431 aa20.34■□□□□ 0.85
HDAC4-212ENST00000495497 HEBP1Q9NRV9 189 aa20.34■□□□□ 0.85
HDAC4-212ENST00000495497 NAALADL1Q9UQQ1 740 aa20.34■□□□□ 0.85
HDAC4-212ENST00000495497 BDP1A6H8Y1 2624 aa20.34■□□□□ 0.85
HDAC4-212ENST00000495497 SLC12A8A0AV02 714 aa20.33■□□□□ 0.85
HDAC4-212ENST00000495497 KRBA1A5PL33 1030 aa20.33■□□□□ 0.85
HDAC4-212ENST00000495497 SART1O43290 800 aaKnown RBP20.33■□□□□ 0.85
HDAC4-212ENST00000495497 PDGFBP01127 241 aaPredicted RBP20.33■□□□□ 0.85
HDAC4-212ENST00000495497 NCAM1P13591 858 aa20.33■□□□□ 0.85
HDAC4-212ENST00000495497 TNFAIP3P21580 790 aa20.33■□□□□ 0.85
HDAC4-212ENST00000495497 GABRB2P47870 512 aa20.33■□□□□ 0.85
HDAC4-212ENST00000495497 ZNF75DP51815 510 aa20.33■□□□□ 0.85
HDAC4-212ENST00000495497 KLHL30Q0D2K2 578 aa20.33■□□□□ 0.85
HDAC4-212ENST00000495497 SLC44A4Q53GD3 710 aa20.33■□□□□ 0.85
HDAC4-212ENST00000495497 SYPL2Q5VXT5 272 aa20.33■□□□□ 0.85
Retrieved 100 of 20,778 RNA–protein pairs in 47.9 ms