RNA–Protein interactions for RNA: ENST00000495232.5

CSNK1E-213, Transcript of casein kinase 1 epsilon, humanhuman

TSL 2

Gene CSNK1E, Length 669 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSNK1E-213ENST00000495232 SCD5Q86SK9 330 aa12.67□□□□□ -0.38
CSNK1E-213ENST00000495232 TMEM110Q86TL2 294 aa12.67□□□□□ -0.38
CSNK1E-213ENST00000495232 ERICH1Q86X53 443 aa12.67□□□□□ -0.38
CSNK1E-213ENST00000495232 ZNF276Q8N554 614 aa12.67□□□□□ -0.38
CSNK1E-213ENST00000495232 WDTC1Q8N5D0 677 aa12.67□□□□□ -0.38
CSNK1E-213ENST00000495232 SLC20A1Q8WUM9 679 aa12.67□□□□□ -0.38
CSNK1E-213ENST00000495232 CPLX3Q8WVH0 158 aa12.67□□□□□ -0.38
CSNK1E-213ENST00000495232 DDX1Q92499 740 aaKnown RBP12.67□□□□□ -0.38
CSNK1E-213ENST00000495232 BAP1Q92560 729 aa12.67□□□□□ -0.38
CSNK1E-213ENST00000495232 NDRG1Q92597 394 aaKnown RBP12.67□□□□□ -0.38
CSNK1E-213ENST00000495232 FAM149B1Q96BN6 582 aa12.67□□□□□ -0.38
CSNK1E-213ENST00000495232 RSPRY1Q96DX4 576 aa12.67□□□□□ -0.38
CSNK1E-213ENST00000495232 RBSNQ9H1K0 784 aa12.67□□□□□ -0.38
CSNK1E-213ENST00000495232 MFSD1Q9H3U5 465 aa12.67□□□□□ -0.38
CSNK1E-213ENST00000495232 OSER1Q9NX31 292 aa12.67□□□□□ -0.38
CSNK1E-213ENST00000495232 CYTH4Q9UIA0 394 aa12.67□□□□□ -0.38
CSNK1E-213ENST00000495232 RASAL2Q9UJF2 1139 aa12.67□□□□□ -0.38
CSNK1E-213ENST00000495232 NUDT5Q9UKK9 219 aa12.67□□□□□ -0.38
CSNK1E-213ENST00000495232 STRIP2Q9ULQ0 834 aa12.67□□□□□ -0.38
CSNK1E-213ENST00000495232 LUC7L2Q9Y383 392 aaKnown RBP12.67□□□□□ -0.38
CSNK1E-213ENST00000495232 SH3BP1Q9Y3L3 701 aa12.67□□□□□ -0.38
CSNK1E-213ENST00000495232 HELZP42694 1942 aaKnown RBP12.66□□□□□ -0.38
CSNK1E-213ENST00000495232 ITIH6Q6UXX5 1313 aa12.66□□□□□ -0.38
CSNK1E-213ENST00000495232 A0A1W2PQJ5 194 aa12.66□□□□□ -0.38
CSNK1E-213ENST00000495232 STK25O00506 426 aa12.66□□□□□ -0.38
CSNK1E-213ENST00000495232 SLC9A3R1O14745 358 aaPredicted RBP12.66□□□□□ -0.38
CSNK1E-213ENST00000495232 LTFP02788 710 aa12.66□□□□□ -0.38
CSNK1E-213ENST00000495232 IRF1P10914 325 aa12.66□□□□□ -0.38
CSNK1E-213ENST00000495232 TCF3P15923 654 aa12.66□□□□□ -0.38
CSNK1E-213ENST00000495232 CDH5P33151 784 aaPredicted RBP12.66□□□□□ -0.38
CSNK1E-213ENST00000495232 IFNAR2P48551 515 aa12.66□□□□□ -0.38
CSNK1E-213ENST00000495232 COG7P83436 770 aa12.66□□□□□ -0.38
CSNK1E-213ENST00000495232 EFEMP1Q12805 493 aa12.66□□□□□ -0.38
CSNK1E-213ENST00000495232 TRIM14Q14142 442 aa12.66□□□□□ -0.38
CSNK1E-213ENST00000495232 ZNF77Q15935 545 aa12.66□□□□□ -0.38
CSNK1E-213ENST00000495232 EFHC1Q5JVL4 640 aa12.66□□□□□ -0.38
CSNK1E-213ENST00000495232 NAA35Q5VZE5 725 aa12.66□□□□□ -0.38
CSNK1E-213ENST00000495232 OR6B2Q6IFH4 312 aa12.66□□□□□ -0.38
CSNK1E-213ENST00000495232 TRIM67Q6ZTA4 783 aa12.66□□□□□ -0.38
CSNK1E-213ENST00000495232 TOGARAM2Q6ZUX3 1019 aa12.66□□□□□ -0.38
CSNK1E-213ENST00000495232 MIB1Q86YT6 1006 aa12.66□□□□□ -0.38
CSNK1E-213ENST00000495232 ZDHHC17Q8IUH5 632 aa12.66□□□□□ -0.38
CSNK1E-213ENST00000495232 CPA5Q8WXQ8 436 aa12.66□□□□□ -0.38
CSNK1E-213ENST00000495232 EDEM1Q92611 657 aa12.66□□□□□ -0.38
CSNK1E-213ENST00000495232 DNASE1L2Q92874 299 aa12.66□□□□□ -0.38
CSNK1E-213ENST00000495232 CPXM1Q96SM3 734 aa12.66□□□□□ -0.38
CSNK1E-213ENST00000495232 AGPAT1Q99943 283 aa12.66□□□□□ -0.38
CSNK1E-213ENST00000495232 TTYH3Q9C0H2 523 aa12.66□□□□□ -0.38
CSNK1E-213ENST00000495232 EPHX3Q9H6B9 360 aa12.66□□□□□ -0.38
CSNK1E-213ENST00000495232 GKN1Q9NS71 199 aa12.66□□□□□ -0.38
CSNK1E-213ENST00000495232 DUS2Q9NX74 493 aaKnown RBP12.66□□□□□ -0.38
CSNK1E-213ENST00000495232 AIPL1Q9NZN9 384 aa12.66□□□□□ -0.38
CSNK1E-213ENST00000495232 CFAP97Q9P2B7 532 aa12.66□□□□□ -0.38
CSNK1E-213ENST00000495232 WNT16Q9UBV4 365 aa12.66□□□□□ -0.38
CSNK1E-213ENST00000495232 NOCTQ9UK39 431 aaKnown RBP12.66□□□□□ -0.38
CSNK1E-213ENST00000495232 LSM7Q9UK45 103 aaKnown RBP12.66□□□□□ -0.38
CSNK1E-213ENST00000495232 CA14Q9ULX7 337 aa12.66□□□□□ -0.38
CSNK1E-213ENST00000495232 CAPN11Q9UMQ6 739 aa12.66□□□□□ -0.38
CSNK1E-213ENST00000495232 PAPSS1O43252 624 aaPredicted RBP12.65□□□□□ -0.38
CSNK1E-213ENST00000495232 GABBR2O75899 941 aa12.65□□□□□ -0.38
CSNK1E-213ENST00000495232 NCAM1P13591 858 aa12.65□□□□□ -0.38
CSNK1E-213ENST00000495232 TNFAIP3P21580 790 aa12.65□□□□□ -0.38
CSNK1E-213ENST00000495232 NSFP46459 744 aaKnown RBP12.65□□□□□ -0.38
CSNK1E-213ENST00000495232 KPNA1P52294 538 aaPredicted RBP12.65□□□□□ -0.38
CSNK1E-213ENST00000495232 NOMO3P69849 1222 aa12.65□□□□□ -0.38
CSNK1E-213ENST00000495232 ZBED6P86452 979 aa12.65□□□□□ -0.38
CSNK1E-213ENST00000495232 FMO1Q01740 532 aa12.65□□□□□ -0.38
CSNK1E-213ENST00000495232 KLHL30Q0D2K2 578 aa12.65□□□□□ -0.38
CSNK1E-213ENST00000495232 USP4Q13107 963 aa12.65□□□□□ -0.38
CSNK1E-213ENST00000495232 PDGFRLQ15198 375 aa12.65□□□□□ -0.38
CSNK1E-213ENST00000495232 TSR1Q2NL82 804 aaKnown RBP12.65□□□□□ -0.38
CSNK1E-213ENST00000495232 SLC44A4Q53GD3 710 aa12.65□□□□□ -0.38
CSNK1E-213ENST00000495232 SARM1Q6SZW1 724 aa12.65□□□□□ -0.38
CSNK1E-213ENST00000495232 IRF2BP2Q7Z5L9 587 aa12.65□□□□□ -0.38
CSNK1E-213ENST00000495232 SIX5Q8N196 739 aa12.65□□□□□ -0.38
CSNK1E-213ENST00000495232 CLEC4CQ8WTT0 213 aa12.65□□□□□ -0.38
CSNK1E-213ENST00000495232 OSCP1Q8WVF1 389 aa12.65□□□□□ -0.38
CSNK1E-213ENST00000495232 ATP2A3Q93084 1043 aa12.65□□□□□ -0.38
CSNK1E-213ENST00000495232 C18orf8Q96DM3 657 aa12.65□□□□□ -0.38
CSNK1E-213ENST00000495232 SHDQ96IW2 340 aa12.65□□□□□ -0.38
CSNK1E-213ENST00000495232 ZFYVE19Q96K21 471 aa12.65□□□□□ -0.38
CSNK1E-213ENST00000495232 LRRC3BQ96PB8 259 aa12.65□□□□□ -0.38
CSNK1E-213ENST00000495232 C1QTNF1Q9BXJ1 281 aa12.65□□□□□ -0.38
CSNK1E-213ENST00000495232 POPDC2Q9HBU9 364 aa12.65□□□□□ -0.38
CSNK1E-213ENST00000495232 ARHGEF3Q9NR81 526 aa12.65□□□□□ -0.38
CSNK1E-213ENST00000495232 MARCH2Q9P0N8 246 aa12.65□□□□□ -0.38
CSNK1E-213ENST00000495232 TBC1D14Q9P2M4 693 aa12.65□□□□□ -0.38
CSNK1E-213ENST00000495232 BZW2Q9Y6E2 419 aaKnown RBP12.65□□□□□ -0.38
CSNK1E-213ENST00000495232 SLC12A8A0AV02 714 aa12.64□□□□□ -0.39
CSNK1E-213ENST00000495232 E2F8A0AVK6 867 aa12.64□□□□□ -0.39
CSNK1E-213ENST00000495232 TMEM221A6NGB7 291 aa12.64□□□□□ -0.39
CSNK1E-213ENST00000495232 M0R296 226 aa12.64□□□□□ -0.39
CSNK1E-213ENST00000495232 MDM4O15151 490 aa12.64□□□□□ -0.39
CSNK1E-213ENST00000495232 ERBB2P04626 1255 aa12.64□□□□□ -0.39
CSNK1E-213ENST00000495232 CYP1A1P04798 512 aaPredicted RBP12.64□□□□□ -0.39
CSNK1E-213ENST00000495232 GLI1P08151 1106 aa12.64□□□□□ -0.39
CSNK1E-213ENST00000495232 CHRNB2P17787 502 aa12.64□□□□□ -0.39
CSNK1E-213ENST00000495232 YWHAZP63104 245 aaKnown RBP12.64□□□□□ -0.39
CSNK1E-213ENST00000495232 AMPD2Q01433 879 aa12.64□□□□□ -0.39
CSNK1E-213ENST00000495232 NR1H3Q13133 447 aa12.64□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 72.1 ms