RNA–Protein interactions for RNA: ENST00000494977.1

FGD4-208, Transcript of FYVE, RhoGEF and PH domain containing 4, human

TSL 2

Gene FGD4, Length 2,349 nt, Biotype nonsense mediated decay.

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
FGD4-208	ENST00000494977	GIMAP8	Q8ND71	665 aa	Predicted RBP	6.53	□□□□□ -1.36
FGD4-208	ENST00000494977	SLAIN1	Q8ND83	568 aa		6.53	□□□□□ -1.36
FGD4-208	ENST00000494977	CDC26	Q8NHZ8	85 aa		6.53	□□□□□ -1.36
FGD4-208	ENST00000494977	EDC3	Q96F86	508 aa	Known RBP	6.53	□□□□□ -1.36
FGD4-208	ENST00000494977	NLRP4	Q96MN2	994 aa		6.53	□□□□□ -1.36
FGD4-208	ENST00000494977	COG8	Q96MW5	612 aa		6.53	□□□□□ -1.36
FGD4-208	ENST00000494977	TARS2	Q9BW92	718 aa	Known RBP	6.53	□□□□□ -1.36
FGD4-208	ENST00000494977	GCOM2	Q9BZD3	368 aa	Predicted RBP	6.53	□□□□□ -1.36
FGD4-208	ENST00000494977	DPEP3	Q9H4B8	488 aa		6.53	□□□□□ -1.36
FGD4-208	ENST00000494977	SMYD3	Q9H7B4	428 aa		6.53	□□□□□ -1.36
FGD4-208	ENST00000494977	CPNE5	Q9HCH3	593 aa		6.53	□□□□□ -1.36
FGD4-208	ENST00000494977	PNPLA3	Q9NST1	481 aa		6.53	□□□□□ -1.36
FGD4-208	ENST00000494977	FRMD4A	Q9P2Q2	1039 aa	Predicted RBP	6.53	□□□□□ -1.36
FGD4-208	ENST00000494977	WBP11	Q9Y2W2	641 aa	Known RBP	6.53	□□□□□ -1.36
FGD4-208	ENST00000494977	TRAF6	Q9Y4K3	522 aa		6.53	□□□□□ -1.36
FGD4-208	ENST00000494977	CORIN	Q9Y5Q5	1042 aa		6.53	□□□□□ -1.36
FGD4-208	ENST00000494977	MAU2	Q9Y6X3	613 aa		6.53	□□□□□ -1.36
FGD4-208	ENST00000494977	TMEM131L	A2VDJ0	1609 aa		6.53	□□□□□ -1.36
FGD4-208	ENST00000494977		A0A087X0T9	212 aa		6.53	□□□□□ -1.36
FGD4-208	ENST00000494977		A0A1W2PQ72	361 aa		6.53	□□□□□ -1.36
FGD4-208	ENST00000494977	EPHB6	O15197	1021 aa		6.53	□□□□□ -1.36
FGD4-208	ENST00000494977	HDAC3	O15379	428 aa		6.53	□□□□□ -1.36
FGD4-208	ENST00000494977	ZBTB43	O43298	467 aa		6.53	□□□□□ -1.36
FGD4-208	ENST00000494977	NDUFA2	O43678	99 aa		6.53	□□□□□ -1.36
FGD4-208	ENST00000494977	DEAF1	O75398	565 aa	Predicted RBP	6.53	□□□□□ -1.36
FGD4-208	ENST00000494977	CLPX	O76031	633 aa		6.53	□□□□□ -1.36
FGD4-208	ENST00000494977	BCL10	O95999	233 aa		6.53	□□□□□ -1.36
FGD4-208	ENST00000494977	DBT	P11182	482 aa	Known RBP	6.53	□□□□□ -1.36
FGD4-208	ENST00000494977	TGM1	P22735	817 aa		6.53	□□□□□ -1.36
FGD4-208	ENST00000494977	DCK	P27707	260 aa		6.53	□□□□□ -1.36
FGD4-208	ENST00000494977	PSMC2	P35998	433 aa	Known RBP	6.53	□□□□□ -1.36
FGD4-208	ENST00000494977	PTGIR	P43119	386 aa		6.53	□□□□□ -1.36
FGD4-208	ENST00000494977	MAPKAPK2	P49137	400 aa		6.53	□□□□□ -1.36
FGD4-208	ENST00000494977	ST13	P50502	369 aa	Known RBP	6.53	□□□□□ -1.36
FGD4-208	ENST00000494977	MRPS15	P82914	257 aa	Known RBP	6.53	□□□□□ -1.36
FGD4-208	ENST00000494977	GNA12	Q03113	381 aa		6.53	□□□□□ -1.36
FGD4-208	ENST00000494977	CAV1	Q03135	178 aa		6.53	□□□□□ -1.36
FGD4-208	ENST00000494977	COASY	Q13057	564 aa		6.53	□□□□□ -1.36
FGD4-208	ENST00000494977	CCNI	Q14094	377 aa		6.53	□□□□□ -1.36
FGD4-208	ENST00000494977	TMED2	Q15363	201 aa		6.53	□□□□□ -1.36
FGD4-208	ENST00000494977	DLGAP5	Q15398	846 aa		6.53	□□□□□ -1.36
FGD4-208	ENST00000494977	MAPRE1	Q15691	268 aa	Known RBP	6.53	□□□□□ -1.36
FGD4-208	ENST00000494977	ABCB5	Q2M3G0	1257 aa		6.53	□□□□□ -1.36
FGD4-208	ENST00000494977	LRIT3	Q3SXY7	679 aa		6.53	□□□□□ -1.36
FGD4-208	ENST00000494977	UBAP2	Q5T6F2	1119 aa	Known RBP	6.53	□□□□□ -1.36
FGD4-208	ENST00000494977	UGT3A1	Q6NUS8	523 aa		6.53	□□□□□ -1.36
FGD4-208	ENST00000494977	GALNT18	Q6P9A2	607 aa		6.53	□□□□□ -1.36
FGD4-208	ENST00000494977	UNC5A	Q6ZN44	842 aa		6.53	□□□□□ -1.36
FGD4-208	ENST00000494977	NT5DC3	Q86UY8	548 aa		6.53	□□□□□ -1.36
FGD4-208	ENST00000494977	TRABD2A	Q86V40	505 aa		6.53	□□□□□ -1.36
FGD4-208	ENST00000494977	ZNF677	Q86XU0	584 aa		6.53	□□□□□ -1.36
FGD4-208	ENST00000494977	GATAD2A	Q86YP4	633 aa		6.53	□□□□□ -1.36
FGD4-208	ENST00000494977	DEPDC4	Q8N2C3	294 aa		6.53	□□□□□ -1.36
FGD4-208	ENST00000494977	APPL2	Q8NEU8	664 aa		6.53	□□□□□ -1.36
FGD4-208	ENST00000494977	SLC2A14	Q8TDB8	520 aa		6.53	□□□□□ -1.36
FGD4-208	ENST00000494977	OXER1	Q8TDS5	423 aa		6.53	□□□□□ -1.36
FGD4-208	ENST00000494977	S100Z	Q8WXG8	99 aa		6.53	□□□□□ -1.36
FGD4-208	ENST00000494977	SEPT1	Q8WYJ6	367 aa		6.53	□□□□□ -1.36
FGD4-208	ENST00000494977	TP53INP1	Q96A56	240 aa		6.53	□□□□□ -1.36
FGD4-208	ENST00000494977	WRNIP1	Q96S55	665 aa		6.53	□□□□□ -1.36
FGD4-208	ENST00000494977	C17orf62	Q9BQA9	187 aa		6.53	□□□□□ -1.36
FGD4-208	ENST00000494977	EFHD1	Q9BUP0	239 aa		6.53	□□□□□ -1.36
FGD4-208	ENST00000494977	SLC26A6	Q9BXS9	759 aa		6.53	□□□□□ -1.36
FGD4-208	ENST00000494977	EMILIN2	Q9BXX0	1053 aa		6.53	□□□□□ -1.36
FGD4-208	ENST00000494977	SLC2A11	Q9BYW1	496 aa		6.53	□□□□□ -1.36
FGD4-208	ENST00000494977	FOXP3	Q9BZS1	431 aa		6.53	□□□□□ -1.36
FGD4-208	ENST00000494977	DCLK3	Q9C098	648 aa		6.53	□□□□□ -1.36
FGD4-208	ENST00000494977	TRABD	Q9H4I3	376 aa		6.53	□□□□□ -1.36
FGD4-208	ENST00000494977	ATP13A3	Q9H7F0	1226 aa		6.53	□□□□□ -1.36
FGD4-208	ENST00000494977	CXorf21	Q9HAI6	301 aa		6.53	□□□□□ -1.36
FGD4-208	ENST00000494977	CABP5	Q9NP86	173 aa		6.53	□□□□□ -1.36
FGD4-208	ENST00000494977	ARHGEF4	Q9NR80	690 aa		6.53	□□□□□ -1.36
FGD4-208	ENST00000494977	FBXO6	Q9NRD1	293 aa	Predicted RBP	6.53	□□□□□ -1.36
FGD4-208	ENST00000494977	IGSF5	Q9NSI5	407 aa		6.53	□□□□□ -1.36
FGD4-208	ENST00000494977	KANSL3	Q9P2N6	904 aa		6.53	□□□□□ -1.36
FGD4-208	ENST00000494977	ADAMTS1	Q9UHI8	967 aa		6.53	□□□□□ -1.36
FGD4-208	ENST00000494977	PTBP2	Q9UKA9	531 aa	Known RBP	6.53	□□□□□ -1.36
FGD4-208	ENST00000494977	EIF3L	Q9Y262	564 aa	Known RBP	6.53	□□□□□ -1.36
FGD4-208	ENST00000494977	RTCB	Q9Y3I0	505 aa	Known RBP	6.53	□□□□□ -1.36
FGD4-208	ENST00000494977	TESMIN	Q9Y4I5	508 aa		6.53	□□□□□ -1.36
FGD4-208	ENST00000494977	PALLD	Q8WX93	1383 aa		6.52	□□□□□ -1.37
FGD4-208	ENST00000494977	DDX60	Q8IY21	1712 aa	Known RBP	6.52	□□□□□ -1.37
FGD4-208	ENST00000494977	ADAMTS13	Q76LX8	1427 aa		6.52	□□□□□ -1.37
FGD4-208	ENST00000494977	MYOCOS	A0A1B0GUC4	107 aa		6.52	□□□□□ -1.37
FGD4-208	ENST00000494977	CCDC194	A0A1B0GVG4	234 aa		6.52	□□□□□ -1.37
FGD4-208	ENST00000494977		A0A1W2PPW3	197 aa		6.52	□□□□□ -1.37
FGD4-208	ENST00000494977	TRPC5OS	A6NMA1	111 aa		6.52	□□□□□ -1.37
FGD4-208	ENST00000494977	CAPN14	A8MX76	684 aa		6.52	□□□□□ -1.37
FGD4-208	ENST00000494977		H0YJX3	145 aa		6.52	□□□□□ -1.37
FGD4-208	ENST00000494977	CYP26A1	O43174	497 aa		6.52	□□□□□ -1.37
FGD4-208	ENST00000494977	DYNC1LI2	O43237	492 aa	Predicted RBP	6.52	□□□□□ -1.37
FGD4-208	ENST00000494977	RNGTT	O60942	597 aa	Known RBP	6.52	□□□□□ -1.37
FGD4-208	ENST00000494977	SPAG6	O75602	509 aa		6.52	□□□□□ -1.37
FGD4-208	ENST00000494977	SERPINI2	O75830	405 aa		6.52	□□□□□ -1.37
FGD4-208	ENST00000494977	GGPS1	O95749	300 aa		6.52	□□□□□ -1.37
FGD4-208	ENST00000494977	HMGN1	P05114	100 aa		6.52	□□□□□ -1.37
FGD4-208	ENST00000494977	MAP4	P27816	1152 aa	Known RBP	6.52	□□□□□ -1.37
FGD4-208	ENST00000494977	PRKAR1B	P31321	381 aa		6.52	□□□□□ -1.37
FGD4-208	ENST00000494977	RPL9	P32969	192 aa	Known RBP	6.52	□□□□□ -1.37
FGD4-208	ENST00000494977	HSD17B2	P37059	387 aa		6.52	□□□□□ -1.37

Retrieved 100 of 20,778 RNA–protein pairs in 22.7 ms