RNA–Protein interactions for RNA: ENST00000494815.1

TSPAN4-212, Transcript of tetraspanin 4, humanhuman

TSL 2

Gene TSPAN4, Length 2,187 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSPAN4-212ENST00000494815 KCTD6Q8NC69 237 aa19.32■□□□□ 0.68
TSPAN4-212ENST00000494815 URGCPQ8TCY9 931 aa19.32■□□□□ 0.68
TSPAN4-212ENST00000494815 FAM172AQ8WUF8 416 aa19.32■□□□□ 0.68
TSPAN4-212ENST00000494815 TEKT4Q8WW24 435 aa19.32■□□□□ 0.68
TSPAN4-212ENST00000494815 RSPH1Q8WYR4 309 aa19.32■□□□□ 0.68
TSPAN4-212ENST00000494815 CHMP6Q96FZ7 201 aa19.32■□□□□ 0.68
TSPAN4-212ENST00000494815 XPO6Q96QU8 1125 aaKnown RBP19.32■□□□□ 0.68
TSPAN4-212ENST00000494815 PEBP4Q96S96 227 aa19.32■□□□□ 0.68
TSPAN4-212ENST00000494815 ACBD6Q9BR61 282 aa19.32■□□□□ 0.68
TSPAN4-212ENST00000494815 KRT82Q9NSB4 513 aa19.32■□□□□ 0.68
TSPAN4-212ENST00000494815 KANSL3Q9P2N6 904 aa19.32■□□□□ 0.68
TSPAN4-212ENST00000494815 OGDHLQ9ULD0 1010 aa19.32■□□□□ 0.68
TSPAN4-212ENST00000494815 LIASO43766 372 aa19.32■□□□□ 0.68
TSPAN4-212ENST00000494815 PLTPP55058 493 aa19.32■□□□□ 0.68
TSPAN4-212ENST00000494815 CDO1Q16878 200 aa19.32■□□□□ 0.68
TSPAN4-212ENST00000494815 NOMO2Q5JPE7 1267 aa19.32■□□□□ 0.68
TSPAN4-212ENST00000494815 CLLU1OSQ5K130 101 aa19.32■□□□□ 0.68
TSPAN4-212ENST00000494815 ZDHHC24Q6UX98 284 aa19.32■□□□□ 0.68
TSPAN4-212ENST00000494815 BBS12Q6ZW61 710 aa19.32■□□□□ 0.68
TSPAN4-212ENST00000494815 FAM35AQ86V20 835 aa19.32■□□□□ 0.68
TSPAN4-212ENST00000494815 CLEC4CQ8WTT0 213 aa19.32■□□□□ 0.68
TSPAN4-212ENST00000494815 PCED1BQ96HM7 432 aa19.32■□□□□ 0.68
TSPAN4-212ENST00000494815 SUSD3Q96L08 255 aa19.32■□□□□ 0.68
TSPAN4-212ENST00000494815 DEFB118Q96PH6 123 aa19.32■□□□□ 0.68
TSPAN4-212ENST00000494815 C11orf84Q9BUA3 381 aaPredicted RBP19.32■□□□□ 0.68
TSPAN4-212ENST00000494815 LRRC4CQ9HCJ2 640 aa19.32■□□□□ 0.68
TSPAN4-212ENST00000494815 NGRNQ9NPE2 291 aaKnown RBP19.32■□□□□ 0.68
TSPAN4-212ENST00000494815 MYBPHLA2RUH7 354 aa19.31■□□□□ 0.68
TSPAN4-212ENST00000494815 ENDOD1O94919 500 aa19.31■□□□□ 0.68
TSPAN4-212ENST00000494815 ATP11AP98196 1134 aa19.31■□□□□ 0.68
TSPAN4-212ENST00000494815 DSC1Q08554 894 aa19.31■□□□□ 0.68
TSPAN4-212ENST00000494815 ADIGQ0VDE8 80 aa19.31■□□□□ 0.68
TSPAN4-212ENST00000494815 KCTD19Q17RG1 926 aaPredicted RBP19.31■□□□□ 0.68
TSPAN4-212ENST00000494815 TTC13Q8NBP0 860 aa19.31■□□□□ 0.68
TSPAN4-212ENST00000494815 CENPIQ92674 756 aaPredicted RBP19.31■□□□□ 0.68
TSPAN4-212ENST00000494815 ELAC1Q9H777 363 aaKnown RBP19.31■□□□□ 0.68
TSPAN4-212ENST00000494815 LRRC4Q9HBW1 653 aa19.31■□□□□ 0.68
TSPAN4-212ENST00000494815 TMEM161AQ9NX61 479 aa19.31■□□□□ 0.68
TSPAN4-212ENST00000494815 WHRNQ9P202 907 aa19.31■□□□□ 0.68
TSPAN4-212ENST00000494815 TPX2Q9ULW0 747 aaKnown RBP19.31■□□□□ 0.68
TSPAN4-212ENST00000494815 ATP8A1Q9Y2Q0 1164 aa19.31■□□□□ 0.68
TSPAN4-212ENST00000494815 TYMPP19971 482 aa19.3■□□□□ 0.68
TSPAN4-212ENST00000494815 BRCC3P46736 316 aa19.3■□□□□ 0.68
TSPAN4-212ENST00000494815 CALCOCO2Q13137 446 aa19.3■□□□□ 0.68
TSPAN4-212ENST00000494815 PAN2Q504Q3 1202 aaKnown RBP19.3■□□□□ 0.68
TSPAN4-212ENST00000494815 PLEKHG4Q58EX7 1191 aa19.3■□□□□ 0.68
TSPAN4-212ENST00000494815 FBXO25Q8TCJ0 367 aa19.3■□□□□ 0.68
TSPAN4-212ENST00000494815 HSPH1Q92598 858 aa19.3■□□□□ 0.68
TSPAN4-212ENST00000494815 NKD2Q969F2 451 aaPredicted RBP19.3■□□□□ 0.68
TSPAN4-212ENST00000494815 RTP3Q9BQQ7 232 aa19.3■□□□□ 0.68
TSPAN4-212ENST00000494815 DDX23Q9BUQ8 820 aaKnown RBP19.3■□□□□ 0.68
TSPAN4-212ENST00000494815 MTRF1LQ9UGC7 380 aaKnown RBP19.3■□□□□ 0.68
TSPAN4-212ENST00000494815 ASIC3Q9UHC3 531 aa19.3■□□□□ 0.68
TSPAN4-212ENST00000494815 DRG1Q9Y295 367 aaKnown RBP19.3■□□□□ 0.68
TSPAN4-212ENST00000494815 NEU2Q9Y3R4 380 aa19.3■□□□□ 0.68
TSPAN4-212ENST00000494815 I3L4J1 428 aa19.3■□□□□ 0.68
TSPAN4-212ENST00000494815 NBNO60934 754 aa19.3■□□□□ 0.68
TSPAN4-212ENST00000494815 BEST1O76090 585 aa19.3■□□□□ 0.68
TSPAN4-212ENST00000494815 NUDT17P0C025 328 aa19.3■□□□□ 0.68
TSPAN4-212ENST00000494815 ADCY1Q08828 1119 aa19.3■□□□□ 0.68
TSPAN4-212ENST00000494815 PDK2Q15119 407 aa19.3■□□□□ 0.68
TSPAN4-212ENST00000494815 ZNF365Q70YC5 407 aa19.3■□□□□ 0.68
TSPAN4-212ENST00000494815 VSIG1Q86XK7 387 aa19.3■□□□□ 0.68
TSPAN4-212ENST00000494815 MAP7D3Q8IWC1 876 aa19.3■□□□□ 0.68
TSPAN4-212ENST00000494815 CCDC89Q8N998 374 aa19.3■□□□□ 0.68
TSPAN4-212ENST00000494815 ART4Q93070 314 aa19.3■□□□□ 0.68
TSPAN4-212ENST00000494815 SMARCD1Q96GM5 515 aa19.3■□□□□ 0.68
TSPAN4-212ENST00000494815 STAU2Q9NUL3 570 aaKnown RBP eCLIP19.3■□□□□ 0.68
TSPAN4-212ENST00000494815 TSC2P49815 1807 aa19.29■□□□□ 0.68
TSPAN4-212ENST00000494815 TMEM189-UBE2V1I3L0A0 370 aa19.29■□□□□ 0.68
TSPAN4-212ENST00000494815 MDM4O15151 490 aa19.29■□□□□ 0.68
TSPAN4-212ENST00000494815 AP1G2O75843 785 aa19.29■□□□□ 0.68
TSPAN4-212ENST00000494815 FBXO21O94952 628 aa19.29■□□□□ 0.68
TSPAN4-212ENST00000494815 ITIH2P19823 946 aa19.29■□□□□ 0.68
TSPAN4-212ENST00000494815 ELF1P32519 619 aa19.29■□□□□ 0.68
TSPAN4-212ENST00000494815 ARSEP51690 589 aa19.29■□□□□ 0.68
TSPAN4-212ENST00000494815 HDAC4P56524 1084 aa19.29■□□□□ 0.68
TSPAN4-212ENST00000494815 MAP3K7CLP57077 242 aa19.29■□□□□ 0.68
TSPAN4-212ENST00000494815 MRPS5P82675 430 aaKnown RBP19.29■□□□□ 0.68
TSPAN4-212ENST00000494815 INTS6LQ5JSJ4 861 aaKnown RBP19.29■□□□□ 0.68
TSPAN4-212ENST00000494815 FAM171BQ6P995 826 aa19.29■□□□□ 0.68
TSPAN4-212ENST00000494815 SIX6OS1Q8N1H7 587 aa19.29■□□□□ 0.68
TSPAN4-212ENST00000494815 CCDC197Q8NCU1 140 aa19.29■□□□□ 0.68
TSPAN4-212ENST00000494815 MDM1Q8TC05 714 aa19.29■□□□□ 0.68
TSPAN4-212ENST00000494815 CCHCR1Q8TD31 782 aa19.29■□□□□ 0.68
TSPAN4-212ENST00000494815 SNF8Q96H20 258 aa19.29■□□□□ 0.68
TSPAN4-212ENST00000494815 FASTKD2Q9NYY8 710 aaKnown RBP eCLIP19.29■□□□□ 0.68
TSPAN4-212ENST00000494815 DNPEPQ9ULA0 475 aa19.29■□□□□ 0.68
TSPAN4-212ENST00000494815 MGRN1O60291 552 aa19.29■□□□□ 0.68
TSPAN4-212ENST00000494815 CST8O60676 142 aa19.29■□□□□ 0.68
TSPAN4-212ENST00000494815 CD48P09326 243 aa19.29■□□□□ 0.68
TSPAN4-212ENST00000494815 MATKP42679 507 aa19.29■□□□□ 0.68
TSPAN4-212ENST00000494815 VCPP55072 806 aaKnown RBP19.29■□□□□ 0.68
TSPAN4-212ENST00000494815 MTFR1Q15390 333 aa19.29■□□□□ 0.68
TSPAN4-212ENST00000494815 STRADAQ7RTN6 431 aa19.29■□□□□ 0.68
TSPAN4-212ENST00000494815 SLC35B2Q8TB61 432 aa19.29■□□□□ 0.68
TSPAN4-212ENST00000494815 HASPINQ8TF76 798 aa19.29■□□□□ 0.68
TSPAN4-212ENST00000494815 APBB2Q92870 758 aa19.29■□□□□ 0.68
TSPAN4-212ENST00000494815 FAM118BQ9BPY3 351 aa19.29■□□□□ 0.68
TSPAN4-212ENST00000494815 CALN1Q9BXU9 219 aa19.29■□□□□ 0.68
Retrieved 100 of 20,778 RNA–protein pairs in 48 ms