RNA–Protein interactions for RNA: ENST00000494646.1

MSH5-218, Transcript of mutS homolog 5, humanhuman

TSL 4

Gene MSH5, Length 528 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSH5-218ENST00000494646 KDSRQ06136 332 aa10.12□□□□□ -0.79
MSH5-218ENST00000494646 KLHL10Q6JEL2 608 aa10.12□□□□□ -0.79
MSH5-218ENST00000494646 CACNA2D4Q7Z3S7 1137 aa10.12□□□□□ -0.79
MSH5-218ENST00000494646 SLC4A11Q8NBS3 891 aa10.12□□□□□ -0.79
MSH5-218ENST00000494646 SPATA20Q8TB22 786 aa10.12□□□□□ -0.79
MSH5-218ENST00000494646 USP33Q8TEY7 942 aa10.12□□□□□ -0.79
MSH5-218ENST00000494646 TIGD1Q96MW7 591 aa10.12□□□□□ -0.79
MSH5-218ENST00000494646 KLF16Q9BXK1 252 aaPredicted RBP10.12□□□□□ -0.79
MSH5-218ENST00000494646 TPSD1Q9BZJ3 242 aa10.12□□□□□ -0.79
MSH5-218ENST00000494646 ARHGEF4Q9NR80 690 aa10.12□□□□□ -0.79
MSH5-218ENST00000494646 DLL3Q9NYJ7 618 aa10.12□□□□□ -0.79
MSH5-218ENST00000494646 HOOK1Q9UJC3 728 aaKnown RBP10.12□□□□□ -0.79
MSH5-218ENST00000494646 MAN1B1Q9UKM7 699 aa10.12□□□□□ -0.79
MSH5-218ENST00000494646 SCML2Q9UQR0 700 aa10.12□□□□□ -0.79
MSH5-218ENST00000494646 GON4LQ3T8J9 2241 aa10.12□□□□□ -0.79
MSH5-218ENST00000494646 CCDC163A0A0D9SF12 145 aa10.11□□□□□ -0.79
MSH5-218ENST00000494646 LOC105378220A0A1B0GUY1 285 aaPredicted RBP10.11□□□□□ -0.79
MSH5-218ENST00000494646 DCDC2BA2VCK2 349 aa10.11□□□□□ -0.79
MSH5-218ENST00000494646 TBC1D3BA6NDS4 549 aa10.11□□□□□ -0.79
MSH5-218ENST00000494646 PRR5-ARHGAP8B1AHC4 643 aa10.11□□□□□ -0.79
MSH5-218ENST00000494646 BIN1O00499 593 aa10.11□□□□□ -0.79
MSH5-218ENST00000494646 APBB3O95704 486 aa10.11□□□□□ -0.79
MSH5-218ENST00000494646 ADH1CP00326 375 aa10.11□□□□□ -0.79
MSH5-218ENST00000494646 HNRNPLP14866 589 aaKnown RBP eCLIP10.11□□□□□ -0.79
MSH5-218ENST00000494646 ARHGAP8P85298 464 aa10.11□□□□□ -0.79
MSH5-218ENST00000494646 COBLL1Q53SF7 1204 aa10.11□□□□□ -0.79
MSH5-218ENST00000494646 C10orf120Q5SQS8 335 aa10.11□□□□□ -0.79
MSH5-218ENST00000494646 BTBD8Q5XKL5 378 aa10.11□□□□□ -0.79
MSH5-218ENST00000494646 ANO7Q6IWH7 933 aa10.11□□□□□ -0.79
MSH5-218ENST00000494646 TMEM92Q6UXU6 159 aa10.11□□□□□ -0.79
MSH5-218ENST00000494646 TPGS1Q6ZTW0 290 aa10.11□□□□□ -0.79
MSH5-218ENST00000494646 HTR3DQ70Z44 454 aa10.11□□□□□ -0.79
MSH5-218ENST00000494646 ERMP1Q7Z2K6 904 aa10.11□□□□□ -0.79
MSH5-218ENST00000494646 SCD5Q86SK9 330 aa10.11□□□□□ -0.79
MSH5-218ENST00000494646 ALLCQ8N6M5 410 aa10.11□□□□□ -0.79
MSH5-218ENST00000494646 TXNDC5Q8NBS9 432 aaKnown RBP10.11□□□□□ -0.79
MSH5-218ENST00000494646 TSTD1Q8NFU3 115 aa10.11□□□□□ -0.79
MSH5-218ENST00000494646 NDRG1Q92597 394 aaKnown RBP10.11□□□□□ -0.79
MSH5-218ENST00000494646 ACDQ96AP0 544 aa10.11□□□□□ -0.79
MSH5-218ENST00000494646 ERLEC1Q96DZ1 483 aa10.11□□□□□ -0.79
MSH5-218ENST00000494646 DNAI2Q9GZS0 605 aa10.11□□□□□ -0.79
MSH5-218ENST00000494646 SMOC1Q9H4F8 434 aa10.11□□□□□ -0.79
MSH5-218ENST00000494646 SPHK2Q9NRA0 654 aa10.11□□□□□ -0.79
MSH5-218ENST00000494646 MTPAPQ9NVV4 582 aaKnown RBP eCLIP10.11□□□□□ -0.793e-9■■□□□ 13
MSH5-218ENST00000494646 ARMCX3Q9UH62 379 aaPredicted RBP10.11□□□□□ -0.79
MSH5-218ENST00000494646 NAGPAQ9UK23 515 aa10.11□□□□□ -0.79
MSH5-218ENST00000494646 SPTBN2O15020 2390 aa10.1□□□□□ -0.79
MSH5-218ENST00000494646 A0A0A0MRY4 1105 aa10.1□□□□□ -0.79
MSH5-218ENST00000494646 MED19A0JLT2 244 aaPredicted RBP10.1□□□□□ -0.79
MSH5-218ENST00000494646 PPP1R3GB7ZBB8 358 aa10.1□□□□□ -0.79
MSH5-218ENST00000494646 SGK1O00141 431 aa10.1□□□□□ -0.79
MSH5-218ENST00000494646 TULP2O00295 520 aa10.1□□□□□ -0.79
MSH5-218ENST00000494646 SLC16A3O15427 465 aaKnown RBP10.1□□□□□ -0.79
MSH5-218ENST00000494646 GREM1O60565 184 aa10.1□□□□□ -0.79
MSH5-218ENST00000494646 TULP3O75386 442 aa10.1□□□□□ -0.79
MSH5-218ENST00000494646 KLF8O95600 359 aaPredicted RBP10.1□□□□□ -0.79
MSH5-218ENST00000494646 HMBSP08397 361 aa10.1□□□□□ -0.79
MSH5-218ENST00000494646 GBP1P32455 592 aa10.1□□□□□ -0.79
MSH5-218ENST00000494646 GRIA2P42262 883 aa10.1□□□□□ -0.79
MSH5-218ENST00000494646 WASP42768 502 aa10.1□□□□□ -0.79
MSH5-218ENST00000494646 TNFRSF4P43489 277 aa10.1□□□□□ -0.79
MSH5-218ENST00000494646 PLA2G4AP47712 749 aa10.1□□□□□ -0.79
MSH5-218ENST00000494646 TUBP50607 506 aa10.1□□□□□ -0.79
MSH5-218ENST00000494646 STX17P56962 302 aa10.1□□□□□ -0.79
MSH5-218ENST00000494646 MRPS21P82921 87 aaKnown RBP10.1□□□□□ -0.79
MSH5-218ENST00000494646 FOXK2Q01167 660 aa10.1□□□□□ -0.79
MSH5-218ENST00000494646 LMNB2Q03252 620 aa10.1□□□□□ -0.79
MSH5-218ENST00000494646 EFEMP1Q12805 493 aa10.1□□□□□ -0.79
MSH5-218ENST00000494646 STIM1Q13586 685 aa10.1□□□□□ -0.79
MSH5-218ENST00000494646 CUL2Q13617 745 aa10.1□□□□□ -0.79
MSH5-218ENST00000494646 SF3A2Q15428 464 aaKnown RBP10.1□□□□□ -0.79
MSH5-218ENST00000494646 CRY1Q16526 586 aa10.1□□□□□ -0.79
MSH5-218ENST00000494646 CSRP2Q16527 193 aa10.1□□□□□ -0.79
MSH5-218ENST00000494646 PLK5Q496M5 336 aa10.1□□□□□ -0.79
MSH5-218ENST00000494646 CCDC40Q4G0X9 1142 aa10.1□□□□□ -0.79
MSH5-218ENST00000494646 PRR23CQ6ZRP0 262 aa10.1□□□□□ -0.79
MSH5-218ENST00000494646 PIGZQ86VD9 579 aa10.1□□□□□ -0.79
MSH5-218ENST00000494646 MIB1Q86YT6 1006 aa10.1□□□□□ -0.79
MSH5-218ENST00000494646 ZC3H3Q8IXZ2 948 aaKnown RBP10.1□□□□□ -0.79
MSH5-218ENST00000494646 KIAA1958Q8N8K9 716 aa10.1□□□□□ -0.79
MSH5-218ENST00000494646 CCDC26Q8TAB7 109 aa10.1□□□□□ -0.79
MSH5-218ENST00000494646 UBA3Q8TBC4 463 aa10.1□□□□□ -0.79
MSH5-218ENST00000494646 BHMTQ93088 406 aa10.1□□□□□ -0.79
MSH5-218ENST00000494646 OTUB2Q96DC9 234 aa10.1□□□□□ -0.79
MSH5-218ENST00000494646 DHTKD1Q96HY7 919 aaPredicted RBP10.1□□□□□ -0.79
MSH5-218ENST00000494646 DUSP9Q99956 384 aaKnown RBP10.1□□□□□ -0.79
MSH5-218ENST00000494646 DUSP15Q9H1R2 295 aaPredicted RBP10.1□□□□□ -0.79
MSH5-218ENST00000494646 PLK2Q9NYY3 685 aa10.1□□□□□ -0.79
MSH5-218ENST00000494646 DEC1Q9P2X7 70 aa10.1□□□□□ -0.79
MSH5-218ENST00000494646 RASAL2Q9UJF2 1139 aa10.1□□□□□ -0.79
MSH5-218ENST00000494646 CDV3Q9UKY7 258 aaKnown RBP10.1□□□□□ -0.79
MSH5-218ENST00000494646 MMP17Q9ULZ9 603 aa10.1□□□□□ -0.79
MSH5-218ENST00000494646 COQ4Q9Y3A0 265 aa10.1□□□□□ -0.79
MSH5-218ENST00000494646 USP3Q9Y6I4 520 aa10.1□□□□□ -0.79
MSH5-218ENST00000494646 PALM2-AKAP2B1ALY0 433 aaPredicted RBP10.09□□□□□ -0.79
MSH5-218ENST00000494646 NEDD8-MDP1E9PL57 170 aa10.09□□□□□ -0.79
MSH5-218ENST00000494646 PSMA7O14818 248 aa10.09□□□□□ -0.79
MSH5-218ENST00000494646 CALCAP01258 141 aa10.09□□□□□ -0.79
MSH5-218ENST00000494646 RALAP11233 206 aa10.09□□□□□ -0.79
MSH5-218ENST00000494646 CD19P15391 556 aa10.09□□□□□ -0.79
Retrieved 100 of 20,778 RNA–protein pairs in 44.1 ms