RNA–Protein interactions for RNA: ENST00000493957.5

UBA3-211, Transcript of ubiquitin like modifier activating enzyme 3, humanhuman

TSL 3

Gene UBA3, Length 581 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBA3-211ENST00000493957 ARHGAP26Q9UNA1 814 aa12.26□□□□□ -0.45
UBA3-211ENST00000493957 WNT6Q9Y6F9 365 aa12.26□□□□□ -0.45
UBA3-211ENST00000493957 OTOL1A6NHN0 477 aaPredicted RBP12.25□□□□□ -0.45
UBA3-211ENST00000493957 SOBPA7XYQ1 873 aa12.25□□□□□ -0.45
UBA3-211ENST00000493957 PRR33A8MZF0 331 aa12.25□□□□□ -0.45
UBA3-211ENST00000493957 CHADO15335 359 aa12.25□□□□□ -0.45
UBA3-211ENST00000493957 TLR5O60602 858 aa12.25□□□□□ -0.45
UBA3-211ENST00000493957 RARGP13631 454 aa12.25□□□□□ -0.45
UBA3-211ENST00000493957 JAM2P57087 298 aa12.25□□□□□ -0.45
UBA3-211ENST00000493957 SLC7A9P82251 487 aa12.25□□□□□ -0.45
UBA3-211ENST00000493957 MLF2Q15773 248 aaPredicted RBP12.25□□□□□ -0.45
UBA3-211ENST00000493957 SLC44A4Q53GD3 710 aa12.25□□□□□ -0.45
UBA3-211ENST00000493957 TPRG1Q6ZUI0 275 aa12.25□□□□□ -0.45
UBA3-211ENST00000493957 WDTC1Q8N5D0 677 aa12.25□□□□□ -0.45
UBA3-211ENST00000493957 FLCNQ8NFG4 579 aa12.25□□□□□ -0.45
UBA3-211ENST00000493957 PTCD2Q8WV60 388 aaKnown RBP12.25□□□□□ -0.45
UBA3-211ENST00000493957 KCTD13Q8WZ19 329 aa12.25□□□□□ -0.45
UBA3-211ENST00000493957 E2F7Q96AV8 911 aa12.25□□□□□ -0.45
UBA3-211ENST00000493957 PCMTD1Q96MG8 357 aaPredicted RBP12.25□□□□□ -0.45
UBA3-211ENST00000493957 FAM83CQ9BQN1 747 aa12.25□□□□□ -0.45
UBA3-211ENST00000493957 FOXQ1Q9C009 403 aa12.25□□□□□ -0.45
UBA3-211ENST00000493957 EBF3Q9H4W6 596 aa12.25□□□□□ -0.45
UBA3-211ENST00000493957 TBC1D17Q9HA65 648 aa12.25□□□□□ -0.45
UBA3-211ENST00000493957 KIF9Q9HAQ2 790 aa12.25□□□□□ -0.45
UBA3-211ENST00000493957 LRRC4Q9HBW1 653 aa12.25□□□□□ -0.45
UBA3-211ENST00000493957 CYLDQ9NQC7 956 aa12.25□□□□□ -0.45
UBA3-211ENST00000493957 MTPAPQ9NVV4 582 aaKnown RBP eCLIP12.25□□□□□ -0.45
UBA3-211ENST00000493957 CFAP97Q9P2B7 532 aa12.25□□□□□ -0.45
UBA3-211ENST00000493957 ZMYM5Q9UJ78 669 aa12.25□□□□□ -0.45
UBA3-211ENST00000493957 MTF2Q9Y483 593 aaPredicted RBP12.25□□□□□ -0.45
UBA3-211ENST00000493957 YJEFN3A6XGL0 299 aa12.24□□□□□ -0.45
UBA3-211ENST00000493957 E7ENQ6 273 aa12.24□□□□□ -0.45
UBA3-211ENST00000493957 PI15O43692 258 aa12.24□□□□□ -0.45
UBA3-211ENST00000493957 GFPT2O94808 682 aa12.24□□□□□ -0.45
UBA3-211ENST00000493957 ZBED1O96006 694 aa12.24□□□□□ -0.45
UBA3-211ENST00000493957 IRF1P10914 325 aa12.24□□□□□ -0.45
UBA3-211ENST00000493957 TUBP50607 506 aa12.24□□□□□ -0.45
UBA3-211ENST00000493957 SLC8A3P57103 927 aa12.24□□□□□ -0.45
UBA3-211ENST00000493957 DAOAP59103 153 aa12.24□□□□□ -0.45
UBA3-211ENST00000493957 YWHAGP61981 247 aaKnown RBP eCLIP12.24□□□□□ -0.45
UBA3-211ENST00000493957 STILQ15468 1287 aa12.24□□□□□ -0.45
UBA3-211ENST00000493957 ARHGAP29Q52LW3 1261 aa12.24□□□□□ -0.45
UBA3-211ENST00000493957 TAF3Q5VWG9 929 aa12.24□□□□□ -0.45
UBA3-211ENST00000493957 NAIF1Q69YI7 327 aaPredicted RBP12.24□□□□□ -0.45
UBA3-211ENST00000493957 PM20D1Q6GTS8 502 aa12.24□□□□□ -0.45
UBA3-211ENST00000493957 MUC6Q6W4X9 2439 aa12.24□□□□□ -0.45
UBA3-211ENST00000493957 BMP8AQ7Z5Y6 402 aa12.24□□□□□ -0.45
UBA3-211ENST00000493957 NOP9Q86U38 636 aaKnown RBP12.24□□□□□ -0.45
UBA3-211ENST00000493957 FBXL6Q8N531 539 aa12.24□□□□□ -0.45
UBA3-211ENST00000493957 TMEM105Q8N8V8 129 aa12.24□□□□□ -0.45
UBA3-211ENST00000493957 C1orf131Q8NDD1 294 aaKnown RBP12.24□□□□□ -0.45
UBA3-211ENST00000493957 NEK11Q8NG66 645 aa12.24□□□□□ -0.45
UBA3-211ENST00000493957 SLC20A1Q8WUM9 679 aa12.24□□□□□ -0.45
UBA3-211ENST00000493957 DNASE1L2Q92874 299 aa12.24□□□□□ -0.45
UBA3-211ENST00000493957 IRF7Q92985 503 aa12.24□□□□□ -0.45
UBA3-211ENST00000493957 CHFRQ96EP1 664 aa12.24□□□□□ -0.45
UBA3-211ENST00000493957 KLF16Q9BXK1 252 aaPredicted RBP12.24□□□□□ -0.45
UBA3-211ENST00000493957 STK33Q9BYT3 514 aa12.24□□□□□ -0.45
UBA3-211ENST00000493957 MIS12Q9H081 205 aa12.24□□□□□ -0.45
UBA3-211ENST00000493957 LINC00597Q9H2U6 94 aa12.24□□□□□ -0.45
UBA3-211ENST00000493957 A0A1B0GTH6 734 aa12.23□□□□□ -0.45
UBA3-211ENST00000493957 MED7O43513 233 aa12.23□□□□□ -0.45
UBA3-211ENST00000493957 CYP11B1P15538 503 aa12.23□□□□□ -0.45
UBA3-211ENST00000493957 TCF3P15923 654 aa12.23□□□□□ -0.45
UBA3-211ENST00000493957 PFKLP17858 780 aa12.23□□□□□ -0.45
UBA3-211ENST00000493957 RFX1P22670 979 aa12.23□□□□□ -0.45
UBA3-211ENST00000493957 FANCCQ00597 558 aa12.23□□□□□ -0.45
UBA3-211ENST00000493957 PFKPQ01813 784 aa12.23□□□□□ -0.45
UBA3-211ENST00000493957 PTK2Q05397 1052 aa12.23□□□□□ -0.45
UBA3-211ENST00000493957 C10orf120Q5SQS8 335 aa12.23□□□□□ -0.45
UBA3-211ENST00000493957 TXNDC11Q6PKC3 985 aa12.23□□□□□ -0.45
UBA3-211ENST00000493957 LRSAM1Q6UWE0 723 aa12.23□□□□□ -0.45
UBA3-211ENST00000493957 SIX6OS1Q8N1H7 587 aa12.23□□□□□ -0.45
UBA3-211ENST00000493957 RNF214Q8ND24 703 aa12.23□□□□□ -0.45
UBA3-211ENST00000493957 EPS8L1Q8TE68 723 aa12.23□□□□□ -0.45
UBA3-211ENST00000493957 DDX1Q92499 740 aaKnown RBP12.23□□□□□ -0.45
UBA3-211ENST00000493957 EDEM1Q92611 657 aa12.23□□□□□ -0.45
UBA3-211ENST00000493957 PIWIL1Q96J94 861 aaKnown RBP12.23□□□□□ -0.45
UBA3-211ENST00000493957 CPXM1Q96SM3 734 aa12.23□□□□□ -0.45
UBA3-211ENST00000493957 SLC4A5Q9BY07 1137 aa12.23□□□□□ -0.45
UBA3-211ENST00000493957 MFSD1Q9H3U5 465 aa12.23□□□□□ -0.45
UBA3-211ENST00000493957 TSPY26PQ9H489 355 aa12.23□□□□□ -0.45
UBA3-211ENST00000493957 ST7Q9NRC1 585 aa12.23□□□□□ -0.45
UBA3-211ENST00000493957 PCDHGC3Q9UN70 934 aa12.23□□□□□ -0.45
UBA3-211ENST00000493957 PIAS3Q9Y6X2 628 aa12.23□□□□□ -0.45
UBA3-211ENST00000493957 WDFY4Q6ZS81 3184 aa12.22□□□□□ -0.45
UBA3-211ENST00000493957 E5RJQ4 531 aa12.22□□□□□ -0.45
UBA3-211ENST00000493957 PAPSS1O43252 624 aaPredicted RBP12.22□□□□□ -0.45
UBA3-211ENST00000493957 GREM1O60565 184 aa12.22□□□□□ -0.45
UBA3-211ENST00000493957 MMEP08473 750 aa12.22□□□□□ -0.45
UBA3-211ENST00000493957 CHRNB2P17787 502 aa12.22□□□□□ -0.45
UBA3-211ENST00000493957 TARSP26639 723 aaKnown RBP12.22□□□□□ -0.45
UBA3-211ENST00000493957 SOX5P35711 763 aa12.22□□□□□ -0.45
UBA3-211ENST00000493957 ATP5C1P36542 298 aaKnown RBP12.22□□□□□ -0.45
UBA3-211ENST00000493957 RPL34P49207 117 aaKnown RBP12.22□□□□□ -0.45
UBA3-211ENST00000493957 PDE6CP51160 858 aa12.22□□□□□ -0.45
UBA3-211ENST00000493957 STARD6P59095 220 aa12.22□□□□□ -0.45
UBA3-211ENST00000493957 EFEMP1Q12805 493 aa12.22□□□□□ -0.45
UBA3-211ENST00000493957 PDCLQ13371 301 aa12.22□□□□□ -0.45
UBA3-211ENST00000493957 NR1I3Q14994 352 aa12.22□□□□□ -0.45
Retrieved 100 of 20,778 RNA–protein pairs in 46.7 ms