RNA–Protein interactions for RNA: ENST00000493949.1

PDLIM1-205, Transcript of PDZ and LIM domain 1, humanhuman

TSL 3

Gene PDLIM1, Length 795 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM1-205ENST00000493949 LMAN1LQ9HAT1 526 aa11.16□□□□□ -0.62
PDLIM1-205ENST00000493949 HAUS2Q9NVX0 235 aa11.16□□□□□ -0.62
PDLIM1-205ENST00000493949 TPX2Q9ULW0 747 aaKnown RBP11.16□□□□□ -0.62
PDLIM1-205ENST00000493949 NDRG2Q9UN36 371 aaKnown RBP11.16□□□□□ -0.62
PDLIM1-205ENST00000493949 RPL26L1Q9UNX3 145 aaKnown RBP11.16□□□□□ -0.62
PDLIM1-205ENST00000493949 PIN4Q9Y237 131 aaKnown RBP11.16□□□□□ -0.62
PDLIM1-205ENST00000493949 VWA8A3KMH1 1905 aa11.15□□□□□ -0.62
PDLIM1-205ENST00000493949 ASCC3Q8N3C0 2202 aaKnown RBP11.15□□□□□ -0.62
PDLIM1-205ENST00000493949 TENM4Q6N022 2769 aa11.15□□□□□ -0.62
PDLIM1-205ENST00000493949 E7ENQ6 273 aa11.15□□□□□ -0.62
PDLIM1-205ENST00000493949 F8W810 466 aa11.15□□□□□ -0.62
PDLIM1-205ENST00000493949 ABLIM1O14639 778 aa11.15□□□□□ -0.62
PDLIM1-205ENST00000493949 NDC80O14777 642 aa11.15□□□□□ -0.62
PDLIM1-205ENST00000493949 PMM2O15305 246 aa11.15□□□□□ -0.62
PDLIM1-205ENST00000493949 RGS16O15492 202 aaPredicted RBP11.15□□□□□ -0.62
PDLIM1-205ENST00000493949 DAPK3O43293 454 aa11.15□□□□□ -0.62
PDLIM1-205ENST00000493949 ATP5HO75947 161 aa11.15□□□□□ -0.62
PDLIM1-205ENST00000493949 EPN2O95208 641 aa11.15□□□□□ -0.62
PDLIM1-205ENST00000493949 ATP6V1G2O95670 118 aa11.15□□□□□ -0.62
PDLIM1-205ENST00000493949 KRT18P05783 430 aaKnown RBP11.15□□□□□ -0.62
PDLIM1-205ENST00000493949 MMEP08473 750 aa11.15□□□□□ -0.62
PDLIM1-205ENST00000493949 CHRNB1P11230 501 aa11.15□□□□□ -0.62
PDLIM1-205ENST00000493949 RARGP13631 454 aa11.15□□□□□ -0.62
PDLIM1-205ENST00000493949 SREBF1P36956 1147 aa11.15□□□□□ -0.62
PDLIM1-205ENST00000493949 RAP1GAPP47736 663 aa11.15□□□□□ -0.62
PDLIM1-205ENST00000493949 ELF3P78545 371 aaPredicted RBP11.15□□□□□ -0.62
PDLIM1-205ENST00000493949 FOXC1Q12948 553 aa11.15□□□□□ -0.62
PDLIM1-205ENST00000493949 ALCAMQ13740 583 aa11.15□□□□□ -0.62
PDLIM1-205ENST00000493949 ZKSCAN8Q15776 578 aaPredicted RBP11.15□□□□□ -0.62
PDLIM1-205ENST00000493949 USP41Q3LFD5 358 aa11.15□□□□□ -0.62
PDLIM1-205ENST00000493949 Q4G0T1 1027 aa11.15□□□□□ -0.62
PDLIM1-205ENST00000493949 CMPK2Q5EBM0 449 aa11.15□□□□□ -0.62
PDLIM1-205ENST00000493949 SMYD5Q6GMV2 418 aa11.15□□□□□ -0.62
PDLIM1-205ENST00000493949 TLDC1Q6P9B6 456 aa11.15□□□□□ -0.62
PDLIM1-205ENST00000493949 CEP120Q8N960 986 aa11.15□□□□□ -0.62
PDLIM1-205ENST00000493949 N4BP2L2Q92802 583 aaPredicted RBP11.15□□□□□ -0.62
PDLIM1-205ENST00000493949 HAS1Q92839 578 aa11.15□□□□□ -0.62
PDLIM1-205ENST00000493949 HPS3Q969F9 1004 aa11.15□□□□□ -0.62
PDLIM1-205ENST00000493949 MIEF2Q96C03 454 aa11.15□□□□□ -0.62
PDLIM1-205ENST00000493949 SCLT1Q96NL6 688 aa11.15□□□□□ -0.62
PDLIM1-205ENST00000493949 SERPINB12Q96P63 405 aa11.15□□□□□ -0.62
PDLIM1-205ENST00000493949 POLR3CQ9BUI4 534 aaPredicted RBP11.15□□□□□ -0.62
PDLIM1-205ENST00000493949 PLA2G2FQ9BZM2 168 aa11.15□□□□□ -0.62
PDLIM1-205ENST00000493949 FOXP3Q9BZS1 431 aa11.15□□□□□ -0.62
PDLIM1-205ENST00000493949 DDX47Q9H0S4 455 aaKnown RBP11.15□□□□□ -0.62
PDLIM1-205ENST00000493949 ARRDC1-AS1Q9H2J1 176 aa11.15□□□□□ -0.62
PDLIM1-205ENST00000493949 CENPHQ9H3R5 247 aa11.15□□□□□ -0.62
PDLIM1-205ENST00000493949 TRPV5Q9NQA5 729 aa11.15□□□□□ -0.62
PDLIM1-205ENST00000493949 INTS9Q9NV88 658 aaKnown RBP11.15□□□□□ -0.62
PDLIM1-205ENST00000493949 GDE1Q9NZC3 331 aa11.15□□□□□ -0.62
PDLIM1-205ENST00000493949 CTNNAL1Q9UBT7 734 aa11.15□□□□□ -0.62
PDLIM1-205ENST00000493949 DNM3Q9UQ16 869 aa11.15□□□□□ -0.62
PDLIM1-205ENST00000493949 USP20Q9Y2K6 914 aa11.15□□□□□ -0.62
PDLIM1-205ENST00000493949 PRG3Q9Y2Y8 225 aaPredicted RBP11.15□□□□□ -0.62
PDLIM1-205ENST00000493949 PCDHB2Q9Y5E7 798 aa11.15□□□□□ -0.62
PDLIM1-205ENST00000493949 ACTL7BQ9Y614 415 aa11.15□□□□□ -0.62
PDLIM1-205ENST00000493949 A0A087WZ62 844 aa11.14□□□□□ -0.63
PDLIM1-205ENST00000493949 IPO5O00410 1097 aaKnown RBP11.14□□□□□ -0.63
PDLIM1-205ENST00000493949 DDX3YO15523 660 aaKnown RBP11.14□□□□□ -0.63
PDLIM1-205ENST00000493949 TTI1O43156 1089 aa11.14□□□□□ -0.63
PDLIM1-205ENST00000493949 TBCAO75347 108 aaKnown RBP11.14□□□□□ -0.63
PDLIM1-205ENST00000493949 TCEA3O75764 348 aa11.14□□□□□ -0.63
PDLIM1-205ENST00000493949 SUN1O94901 812 aa11.14□□□□□ -0.63
PDLIM1-205ENST00000493949 OAS1P00973 400 aaKnown RBP11.14□□□□□ -0.63
PDLIM1-205ENST00000493949 POMCP01189 267 aa11.14□□□□□ -0.63
PDLIM1-205ENST00000493949 NR3C1P04150 777 aa11.14□□□□□ -0.63
PDLIM1-205ENST00000493949 PSAPP07602 524 aa11.14□□□□□ -0.63
PDLIM1-205ENST00000493949 CCND1P24385 295 aa11.14□□□□□ -0.63
PDLIM1-205ENST00000493949 PSMC2P35998 433 aaKnown RBP11.14□□□□□ -0.63
PDLIM1-205ENST00000493949 NOVA1P51513 510 aaKnown RBP11.14□□□□□ -0.63
PDLIM1-205ENST00000493949 CCNG1P51959 295 aa11.14□□□□□ -0.63
PDLIM1-205ENST00000493949 MLLT6P55198 1093 aaPredicted RBP11.14□□□□□ -0.63
PDLIM1-205ENST00000493949 SNRPFP62306 86 aaKnown RBP11.14□□□□□ -0.63
PDLIM1-205ENST00000493949 IRX1P78414 480 aaPredicted RBP11.14□□□□□ -0.63
PDLIM1-205ENST00000493949 ZNF252P-AS1Q0IIN9 211 aa11.14□□□□□ -0.63
PDLIM1-205ENST00000493949 SKIDA1Q1XH10 827 aa11.14□□□□□ -0.63
PDLIM1-205ENST00000493949 CCDC38Q502W7 563 aa11.14□□□□□ -0.63
PDLIM1-205ENST00000493949 TRPM8Q7Z2W7 1104 aa11.14□□□□□ -0.63
PDLIM1-205ENST00000493949 KCNK18Q7Z418 384 aa11.14□□□□□ -0.63
PDLIM1-205ENST00000493949 ZNF410Q86VK4 478 aa11.14□□□□□ -0.63
PDLIM1-205ENST00000493949 WDR5BQ86VZ2 330 aa11.14□□□□□ -0.63
PDLIM1-205ENST00000493949 SLC9A9Q8IVB4 645 aa11.14□□□□□ -0.63
PDLIM1-205ENST00000493949 KSR1Q8IVT5 923 aa11.14□□□□□ -0.63
PDLIM1-205ENST00000493949 RIBC1Q8N443 379 aaPredicted RBP11.14□□□□□ -0.63
PDLIM1-205ENST00000493949 SLC35C1Q96A29 364 aa11.14□□□□□ -0.63
PDLIM1-205ENST00000493949 ELSPBP1Q96BH3 223 aa11.14□□□□□ -0.63
PDLIM1-205ENST00000493949 EEF2KMTQ96G04 330 aa11.14□□□□□ -0.63
PDLIM1-205ENST00000493949 FDXACB1Q9BRP7 624 aaPredicted RBP11.14□□□□□ -0.63
PDLIM1-205ENST00000493949 ZNF577Q9BSK1 485 aa11.14□□□□□ -0.63
PDLIM1-205ENST00000493949 SYT11Q9BT88 431 aa11.14□□□□□ -0.63
PDLIM1-205ENST00000493949 SCNM1Q9BWG6 230 aa11.14□□□□□ -0.63
PDLIM1-205ENST00000493949 PACSIN1Q9BY11 444 aa11.14□□□□□ -0.63
PDLIM1-205ENST00000493949 GPR62Q9BZJ7 368 aa11.14□□□□□ -0.63
PDLIM1-205ENST00000493949 PPCSQ9HAB8 311 aa11.14□□□□□ -0.63
PDLIM1-205ENST00000493949 SIX2Q9NPC8 291 aa11.14□□□□□ -0.63
PDLIM1-205ENST00000493949 UBN1Q9NPG3 1134 aa11.14□□□□□ -0.63
PDLIM1-205ENST00000493949 TBC1D22BQ9NU19 505 aa11.14□□□□□ -0.63
PDLIM1-205ENST00000493949 NOP53Q9NZM5 478 aaKnown RBP11.14□□□□□ -0.63
PDLIM1-205ENST00000493949 GCNT4Q9P109 453 aa11.14□□□□□ -0.63
PDLIM1-205ENST00000493949 AMACRQ9UHK6 382 aa11.14□□□□□ -0.63
Retrieved 100 of 20,778 RNA–protein pairs in 29.1 ms