RNA–Protein interactions for RNA: ENST00000493886.5

VCP-207, Transcript of valosin containing protein, humanhuman

TSL 2

Gene VCP, Length 2,942 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VCP-207ENST00000493886 ATP6V1G2O95670 118 aa14.35□□□□□ -0.11
VCP-207ENST00000493886 GHRP10912 638 aa14.35□□□□□ -0.11
VCP-207ENST00000493886 CCDC130P13994 396 aa14.35□□□□□ -0.11
VCP-207ENST00000493886 LMO2P25791 158 aa14.35□□□□□ -0.11
VCP-207ENST00000493886 ADORA2BP29275 332 aa14.35□□□□□ -0.11
VCP-207ENST00000493886 SDC4P31431 198 aa14.35□□□□□ -0.11
VCP-207ENST00000493886 STX2P32856 288 aa14.35□□□□□ -0.11
VCP-207ENST00000493886 EIF3EP60228 445 aaKnown RBP14.35□□□□□ -0.11
VCP-207ENST00000493886 ZNF618Q5T7W0 954 aa14.35□□□□□ -0.11
VCP-207ENST00000493886 TGS1Q96RS0 853 aaKnown RBP14.35□□□□□ -0.11
VCP-207ENST00000493886 SNX25Q9H3E2 840 aa14.35□□□□□ -0.11
VCP-207ENST00000493886 NGRNQ9NPE2 291 aaKnown RBP14.35□□□□□ -0.11
VCP-207ENST00000493886 CHCHD3Q9NX63 227 aaKnown RBP14.35□□□□□ -0.11
VCP-207ENST00000493886 USP15Q9Y4E8 981 aaPredicted RBP14.35□□□□□ -0.11
VCP-207ENST00000493886 MYADML2A6NDP7 307 aa14.35□□□□□ -0.11
VCP-207ENST00000493886 MCF2LO15068 1137 aa14.35□□□□□ -0.11
VCP-207ENST00000493886 ABHD2P08910 425 aa14.35□□□□□ -0.11
VCP-207ENST00000493886 C6orf222P0C671 652 aaPredicted RBP14.35□□□□□ -0.11
VCP-207ENST00000493886 ATP5DP30049 168 aa14.35□□□□□ -0.11
VCP-207ENST00000493886 BST2Q10589 180 aaKnown RBP14.35□□□□□ -0.11
VCP-207ENST00000493886 DPYSL3Q14195 570 aa14.35□□□□□ -0.11
VCP-207ENST00000493886 STAT4Q14765 748 aa14.35□□□□□ -0.11
VCP-207ENST00000493886 ACCSLQ4AC99 568 aa14.35□□□□□ -0.11
VCP-207ENST00000493886 HHATQ5VTY9 493 aa14.35□□□□□ -0.11
VCP-207ENST00000493886 TWF2Q6IBS0 349 aaKnown RBP14.35□□□□□ -0.11
VCP-207ENST00000493886 SCYL2Q6P3W7 929 aa14.35□□□□□ -0.11
VCP-207ENST00000493886 SAPCD2Q86UD0 394 aa14.35□□□□□ -0.11
VCP-207ENST00000493886 ZDHHC17Q8IUH5 632 aa14.35□□□□□ -0.11
VCP-207ENST00000493886 ANKRD52Q8NB46 1076 aa14.35□□□□□ -0.11
VCP-207ENST00000493886 APPL2Q8NEU8 664 aa14.35□□□□□ -0.11
VCP-207ENST00000493886 MICAL1Q8TDZ2 1067 aa14.35□□□□□ -0.11
VCP-207ENST00000493886 FAM172AQ8WUF8 416 aa14.35□□□□□ -0.11
VCP-207ENST00000493886 RMDN2Q96LZ7 410 aa14.35□□□□□ -0.11
VCP-207ENST00000493886 CCDC77Q9BR77 488 aa14.35□□□□□ -0.11
VCP-207ENST00000493886 ECT2Q9H8V3 914 aa14.35□□□□□ -0.11
VCP-207ENST00000493886 KIF9Q9HAQ2 790 aa14.35□□□□□ -0.11
VCP-207ENST00000493886 LMCD1Q9NZU5 365 aa14.35□□□□□ -0.11
VCP-207ENST00000493886 CD151P48509 253 aa14.34□□□□□ -0.11
VCP-207ENST00000493886 BCAT1P54687 386 aa14.34□□□□□ -0.11
VCP-207ENST00000493886 SV2CQ496J9 727 aa14.34□□□□□ -0.11
VCP-207ENST00000493886 BOLA3Q53S33 107 aa14.34□□□□□ -0.11
VCP-207ENST00000493886 FAM182AQ5T1J6 154 aa14.34□□□□□ -0.11
VCP-207ENST00000493886 TAF2Q6P1X5 1199 aa14.34□□□□□ -0.11
VCP-207ENST00000493886 PCGF5Q86SE9 256 aa14.34□□□□□ -0.11
VCP-207ENST00000493886 UNC45BQ8IWX7 931 aa14.34□□□□□ -0.11
VCP-207ENST00000493886 SPATA18Q8TC71 538 aa14.34□□□□□ -0.11
VCP-207ENST00000493886 SPOCK2Q92563 424 aa14.34□□□□□ -0.11
VCP-207ENST00000493886 P3H4Q92791 437 aa14.34□□□□□ -0.11
VCP-207ENST00000493886 BLOC1S6Q9UL45 172 aa14.34□□□□□ -0.11
VCP-207ENST00000493886 FARP1Q9Y4F1 1045 aaPredicted RBP14.34□□□□□ -0.11
VCP-207ENST00000493886 DUSP11O75319 330 aaKnown RBP14.34□□□□□ -0.11
VCP-207ENST00000493886 RBP3P10745 1247 aa14.34□□□□□ -0.11
VCP-207ENST00000493886 RPL22P35268 128 aaKnown RBP14.34□□□□□ -0.11
VCP-207ENST00000493886 PEX19P40855 299 aa14.34□□□□□ -0.11
VCP-207ENST00000493886 CTCFP49711 727 aaPredicted RBP14.34□□□□□ -0.11
VCP-207ENST00000493886 TFDP2Q14188 446 aa14.34□□□□□ -0.11
VCP-207ENST00000493886 KRT81Q14533 505 aa14.34□□□□□ -0.11
VCP-207ENST00000493886 PREPLQ4J6C6 727 aaPredicted RBP14.34□□□□□ -0.11
VCP-207ENST00000493886 TRPV1Q8NER1 839 aa14.34□□□□□ -0.11
VCP-207ENST00000493886 TTC25Q96NG3 672 aa14.34□□□□□ -0.11
VCP-207ENST00000493886 NAALADL1Q9UQQ1 740 aa14.34□□□□□ -0.11
VCP-207ENST00000493886 DCAF8L1A6NGE4 600 aa14.33□□□□□ -0.12
VCP-207ENST00000493886 POC1B-GALNT4F8VUJ3 575 aa14.33□□□□□ -0.12
VCP-207ENST00000493886 MGRN1O60291 552 aa14.33□□□□□ -0.12
VCP-207ENST00000493886 CTGFP29279 349 aa14.33□□□□□ -0.12
VCP-207ENST00000493886 NCALDP61601 193 aa14.33□□□□□ -0.12
VCP-207ENST00000493886 CRHR2Q13324 411 aa14.33□□□□□ -0.12
VCP-207ENST00000493886 FASTKD3Q14CZ7 662 aaKnown RBP14.33□□□□□ -0.12
VCP-207ENST00000493886 RBBP5Q15291 538 aaKnown RBP14.33□□□□□ -0.12
VCP-207ENST00000493886 CCDC142Q17RM4 750 aa14.33□□□□□ -0.12
VCP-207ENST00000493886 NPNTQ6UXI9 565 aa14.33□□□□□ -0.12
VCP-207ENST00000493886 LIMS2Q7Z4I7 341 aa14.33□□□□□ -0.12
VCP-207ENST00000493886 MAP7D3Q8IWC1 876 aa14.33□□□□□ -0.12
VCP-207ENST00000493886 PHC3Q8NDX5 983 aa14.33□□□□□ -0.12
VCP-207ENST00000493886 RNF157Q96PX1 679 aa14.33□□□□□ -0.12
VCP-207ENST00000493886 CCDC134Q9H6E4 229 aa14.33□□□□□ -0.12
VCP-207ENST00000493886 GPATCH2LQ9NWQ4 482 aa14.33□□□□□ -0.12
VCP-207ENST00000493886 HUS1O60921 280 aa14.33□□□□□ -0.12
VCP-207ENST00000493886 CDH16O75309 829 aa14.33□□□□□ -0.12
VCP-207ENST00000493886 SLC10A3P09131 477 aa14.33□□□□□ -0.12
VCP-207ENST00000493886 DESP17661 470 aa14.33□□□□□ -0.12
VCP-207ENST00000493886 GCKP35557 465 aa14.33□□□□□ -0.12
VCP-207ENST00000493886 LILRA4P59901 499 aa14.33□□□□□ -0.12
VCP-207ENST00000493886 CCDC15Q0P6D6 951 aa14.33□□□□□ -0.12
VCP-207ENST00000493886 GRIK3Q13003 919 aa14.33□□□□□ -0.12
VCP-207ENST00000493886 PDK2Q15119 407 aa14.33□□□□□ -0.12
VCP-207ENST00000493886 NOMO1Q15155 1222 aa14.33□□□□□ -0.12
VCP-207ENST00000493886 FAM47CQ5HY64 1035 aa14.33□□□□□ -0.12
VCP-207ENST00000493886 CENPUQ71F23 418 aa14.33□□□□□ -0.12
VCP-207ENST00000493886 PPIL6Q8IXY8 311 aa14.33□□□□□ -0.12
VCP-207ENST00000493886 ADGRF2Q8IZF7 708 aa14.33□□□□□ -0.12
VCP-207ENST00000493886 FAM71DQ8N9W8 422 aa14.33□□□□□ -0.12
VCP-207ENST00000493886 TRAF3IP1Q8TDR0 691 aaPredicted RBP14.33□□□□□ -0.12
VCP-207ENST00000493886 CLEC4CQ8WTT0 213 aa14.33□□□□□ -0.12
VCP-207ENST00000493886 TEKT4Q8WW24 435 aa14.33□□□□□ -0.12
VCP-207ENST00000493886 CPT1BQ92523 772 aa14.33□□□□□ -0.12
VCP-207ENST00000493886 STAMBPL1Q96FJ0 436 aa14.33□□□□□ -0.12
VCP-207ENST00000493886 ARPC5LQ9BPX5 153 aa14.33□□□□□ -0.12
VCP-207ENST00000493886 LGALS13Q9UHV8 139 aa14.33□□□□□ -0.12
VCP-207ENST00000493886 RASA4BC9J798 803 aa14.32□□□□□ -0.12
Retrieved 100 of 20,778 RNA–protein pairs in 24.2 ms