RNA–Protein interactions for RNA: ENST00000493669.2

PHACTR4-204, Transcript of phosphatase and actin regulator 4, humanhuman

TSL 1 (best)

Gene PHACTR4, Length 3,078 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHACTR4-204ENST00000493669 LRRC4Q9HBW1 653 aa11.24□□□□□ -0.61
PHACTR4-204ENST00000493669 INTS9Q9NV88 658 aaKnown RBP11.24□□□□□ -0.61
PHACTR4-204ENST00000493669 DDX43Q9NXZ2 648 aaKnown RBP11.24□□□□□ -0.61
PHACTR4-204ENST00000493669 SLC24A2Q9UI40 661 aa11.24□□□□□ -0.61
PHACTR4-204ENST00000493669 CDH9Q9ULB4 789 aa11.24□□□□□ -0.61
PHACTR4-204ENST00000493669 STAP1Q9ULZ2 295 aa11.24□□□□□ -0.61
PHACTR4-204ENST00000493669 AP4E1Q9UPM8 1137 aa11.24□□□□□ -0.61
PHACTR4-204ENST00000493669 TMEM88BA6NKF7 163 aa11.23□□□□□ -0.61
PHACTR4-204ENST00000493669 CHADO15335 359 aa11.23□□□□□ -0.61
PHACTR4-204ENST00000493669 ZNF189O75820 626 aaPredicted RBP11.23□□□□□ -0.61
PHACTR4-204ENST00000493669 NOS2P35228 1153 aa11.23□□□□□ -0.61
PHACTR4-204ENST00000493669 SEC24CP53992 1094 aa11.23□□□□□ -0.61
PHACTR4-204ENST00000493669 ADCY1Q08828 1119 aa11.23□□□□□ -0.61
PHACTR4-204ENST00000493669 PDIA2Q13087 525 aaKnown RBP11.23□□□□□ -0.61
PHACTR4-204ENST00000493669 DSC3Q14574 896 aa11.23□□□□□ -0.61
PHACTR4-204ENST00000493669 KCNA10Q16322 511 aa11.23□□□□□ -0.61
PHACTR4-204ENST00000493669 CYP4F22Q6NT55 531 aa11.23□□□□□ -0.61
PHACTR4-204ENST00000493669 AGMOQ6ZNB7 445 aa11.23□□□□□ -0.61
PHACTR4-204ENST00000493669 PAQR9Q6ZVX9 377 aa11.23□□□□□ -0.61
PHACTR4-204ENST00000493669 BNIPLQ7Z465 357 aa11.23□□□□□ -0.61
PHACTR4-204ENST00000493669 TADA2BQ86TJ2 420 aa11.23□□□□□ -0.61
PHACTR4-204ENST00000493669 ZBED8Q8IZ13 594 aa11.23□□□□□ -0.61
PHACTR4-204ENST00000493669 PDIK1LQ8N165 341 aa11.23□□□□□ -0.61
PHACTR4-204ENST00000493669 NT5C3BQ969T7 300 aa11.23□□□□□ -0.61
PHACTR4-204ENST00000493669 PGBD4Q96DM1 585 aa11.23□□□□□ -0.61
PHACTR4-204ENST00000493669 CHMP6Q96FZ7 201 aa11.23□□□□□ -0.61
PHACTR4-204ENST00000493669 SYT15Q9BQS2 421 aa11.23□□□□□ -0.61
PHACTR4-204ENST00000493669 ZMYND8Q9ULU4 1186 aaPredicted RBP11.23□□□□□ -0.61
PHACTR4-204ENST00000493669 EXOC1LA0A1B0GW35 172 aa11.23□□□□□ -0.61
PHACTR4-204ENST00000493669 CYP2F1P24903 491 aa11.23□□□□□ -0.61
PHACTR4-204ENST00000493669 PCSK1P29120 753 aa11.23□□□□□ -0.61
PHACTR4-204ENST00000493669 THPOP40225 353 aa11.23□□□□□ -0.61
PHACTR4-204ENST00000493669 AIF1P55008 147 aa11.23□□□□□ -0.61
PHACTR4-204ENST00000493669 YWHAZP63104 245 aaKnown RBP11.23□□□□□ -0.61
PHACTR4-204ENST00000493669 RNASELQ05823 741 aaKnown RBP11.23□□□□□ -0.61
PHACTR4-204ENST00000493669 ADIGQ0VDE8 80 aa11.23□□□□□ -0.61
PHACTR4-204ENST00000493669 NPNTQ6UXI9 565 aa11.23□□□□□ -0.61
PHACTR4-204ENST00000493669 DSTYKQ6XUX3 929 aa11.23□□□□□ -0.61
PHACTR4-204ENST00000493669 CLEC20AQ6ZU45 233 aa11.23□□□□□ -0.61
PHACTR4-204ENST00000493669 BZW1Q7L1Q6 419 aaKnown RBP11.23□□□□□ -0.61
PHACTR4-204ENST00000493669 SIX6OS1Q8N1H7 587 aa11.23□□□□□ -0.61
PHACTR4-204ENST00000493669 SLC2A13Q96QE2 648 aa11.23□□□□□ -0.61
PHACTR4-204ENST00000493669 USP29Q9HBJ7 922 aa11.23□□□□□ -0.61
PHACTR4-204ENST00000493669 GPATCH2LQ9NWQ4 482 aa11.23□□□□□ -0.61
PHACTR4-204ENST00000493669 SENP1Q9P0U3 644 aa11.23□□□□□ -0.61
PHACTR4-204ENST00000493669 A0A0U1RQF3 1178 aa11.22□□□□□ -0.61
PHACTR4-204ENST00000493669 MAGEA6P43360 314 aa11.22□□□□□ -0.61
PHACTR4-204ENST00000493669 NOGQ13253 232 aa11.22□□□□□ -0.61
PHACTR4-204ENST00000493669 CA9Q16790 459 aa11.22□□□□□ -0.61
PHACTR4-204ENST00000493669 MDH1BQ5I0G3 518 aa11.22□□□□□ -0.61
PHACTR4-204ENST00000493669 C1orf228Q6PIY5 440 aa11.22□□□□□ -0.61
PHACTR4-204ENST00000493669 MDM1Q8TC05 714 aa11.22□□□□□ -0.61
PHACTR4-204ENST00000493669 UROC1Q96N76 676 aa11.22□□□□□ -0.61
PHACTR4-204ENST00000493669 ZIC5Q96T25 663 aa11.22□□□□□ -0.61
PHACTR4-204ENST00000493669 MED10Q9BTT4 135 aa11.22□□□□□ -0.61
PHACTR4-204ENST00000493669 AGO3Q9H9G7 860 aaKnown RBP11.22□□□□□ -0.61
PHACTR4-204ENST00000493669 XPO7Q9UIA9 1087 aaKnown RBP11.22□□□□□ -0.61
PHACTR4-204ENST00000493669 PADI3Q9ULW8 664 aa11.22□□□□□ -0.61
PHACTR4-204ENST00000493669 NAALADL1Q9UQQ1 740 aa11.22□□□□□ -0.61
PHACTR4-204ENST00000493669 ARHGEF37A1IGU5 675 aa11.22□□□□□ -0.61
PHACTR4-204ENST00000493669 MEIS3P2A8K0S8 358 aa11.22□□□□□ -0.61
PHACTR4-204ENST00000493669 ZBED1O96006 694 aa11.22□□□□□ -0.61
PHACTR4-204ENST00000493669 PRKAR2AP13861 404 aaKnown RBP11.22□□□□□ -0.61
PHACTR4-204ENST00000493669 ATP2A2P16615 1042 aaKnown RBP11.22□□□□□ -0.61
PHACTR4-204ENST00000493669 CLCNKBP51801 687 aa11.22□□□□□ -0.61
PHACTR4-204ENST00000493669 GRIK3Q13003 919 aa11.22□□□□□ -0.61
PHACTR4-204ENST00000493669 KCNJ11Q14654 390 aa11.22□□□□□ -0.61
PHACTR4-204ENST00000493669 UPP1Q16831 310 aa11.22□□□□□ -0.61
PHACTR4-204ENST00000493669 ANKRD22Q5VYY1 191 aa11.22□□□□□ -0.61
PHACTR4-204ENST00000493669 FAM35AQ86V20 835 aa11.22□□□□□ -0.61
PHACTR4-204ENST00000493669 ZC3H18Q86VM9 953 aaKnown RBP11.22□□□□□ -0.61
PHACTR4-204ENST00000493669 DEFB106AQ8N104 65 aa11.22□□□□□ -0.61
PHACTR4-204ENST00000493669 PYROXD1Q8WU10 500 aa11.22□□□□□ -0.61
PHACTR4-204ENST00000493669 SLC9A7Q96T83 725 aa11.22□□□□□ -0.61
PHACTR4-204ENST00000493669 NPY6RQ99463 290 aa11.22□□□□□ -0.61
PHACTR4-204ENST00000493669 DHX35Q9H5Z1 703 aaKnown RBP11.22□□□□□ -0.61
PHACTR4-204ENST00000493669 VPS37BQ9H9H4 285 aa11.22□□□□□ -0.61
PHACTR4-204ENST00000493669 CRTAC1Q9NQ79 661 aa11.22□□□□□ -0.61
PHACTR4-204ENST00000493669 CNGB3Q9NQW8 809 aa11.22□□□□□ -0.61
PHACTR4-204ENST00000493669 MTMR10Q9NXD2 777 aa11.22□□□□□ -0.61
PHACTR4-204ENST00000493669 RRN3Q9NYV6 651 aa11.22□□□□□ -0.61
PHACTR4-204ENST00000493669 DSEQ9UL01 958 aa11.22□□□□□ -0.61
PHACTR4-204ENST00000493669 FZD10Q9ULW2 581 aa11.22□□□□□ -0.61
PHACTR4-204ENST00000493669 RRP15Q9Y3B9 282 aaKnown RBP11.22□□□□□ -0.61
PHACTR4-204ENST00000493669 SF3B1O75533 1304 aaKnown RBP eCLIP11.22□□□□□ -0.615e-6■■■■■ 74.7
PHACTR4-204ENST00000493669 HACD1B0YJ81 288 aa11.22□□□□□ -0.61
PHACTR4-204ENST00000493669 C9IYK1 514 aa11.22□□□□□ -0.61
PHACTR4-204ENST00000493669 INPPL1O15357 1258 aa11.22□□□□□ -0.61
PHACTR4-204ENST00000493669 ATP2C2O75185 946 aa11.22□□□□□ -0.61
PHACTR4-204ENST00000493669 SPAG6O75602 509 aa11.22□□□□□ -0.61
PHACTR4-204ENST00000493669 CYP11A1P05108 521 aa11.22□□□□□ -0.61
PHACTR4-204ENST00000493669 ODC1P11926 461 aa11.22□□□□□ -0.61
PHACTR4-204ENST00000493669 TFE3P19532 575 aaPredicted RBP11.22□□□□□ -0.61
PHACTR4-204ENST00000493669 ARL4AP40617 200 aa11.22□□□□□ -0.61
PHACTR4-204ENST00000493669 SULT1E1P49888 294 aa11.22□□□□□ -0.61
PHACTR4-204ENST00000493669 SCNN1GP51170 649 aa11.22□□□□□ -0.61
PHACTR4-204ENST00000493669 BASP1P80723 227 aaKnown RBP11.22□□□□□ -0.61
PHACTR4-204ENST00000493669 KLHL38Q2WGJ6 581 aa11.22□□□□□ -0.61
PHACTR4-204ENST00000493669 PPP6R3Q5H9R7 873 aaPredicted RBP11.22□□□□□ -0.61
PHACTR4-204ENST00000493669 EFHC2Q5JST6 749 aa11.22□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 32.5 ms