RNA–Protein interactions for RNA: ENST00000493601.5

PTPRU-208, Transcript of protein tyrosine phosphatase, receptor type U, humanhuman

TSL 5

Gene PTPRU, Length 695 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRU-208ENST00000493601 CYLDQ9NQC7 956 aa17.55■□□□□ 0.4
PTPRU-208ENST00000493601 UTP3Q9NQZ2 479 aaKnown RBP eCLIP17.55■□□□□ 0.4
PTPRU-208ENST00000493601 BCCIPQ9P287 314 aaKnown RBP eCLIP17.55■□□□□ 0.4
PTPRU-208ENST00000493601 MAPK8IP1Q9UQF2 711 aa17.55■□□□□ 0.4
PTPRU-208ENST00000493601 TPRP12270 2363 aaKnown RBP17.55■□□□□ 0.4
PTPRU-208ENST00000493601 CNOT1A5YKK6 2376 aaKnown RBP17.54■□□□□ 0.4
PTPRU-208ENST00000493601 A0A1W2PQ27 194 aa17.54■□□□□ 0.4
PTPRU-208ENST00000493601 A0A1W2PQ64 194 aa17.54■□□□□ 0.4
PTPRU-208ENST00000493601 A0A1W2PQD8 194 aa17.54■□□□□ 0.4
PTPRU-208ENST00000493601 TBC1D3BA6NDS4 549 aa17.54■□□□□ 0.4
PTPRU-208ENST00000493601 TM4SF5O14894 197 aa17.54■□□□□ 0.4
PTPRU-208ENST00000493601 CYP26A1O43174 497 aa17.54■□□□□ 0.4
PTPRU-208ENST00000493601 TULP3O75386 442 aa17.54■□□□□ 0.4
PTPRU-208ENST00000493601 BCKDHBP21953 392 aa17.54■□□□□ 0.4
PTPRU-208ENST00000493601 ATP5C1P36542 298 aaKnown RBP17.54■□□□□ 0.4
PTPRU-208ENST00000493601 KRBA2Q6ZNG9 492 aa17.54■□□□□ 0.4
PTPRU-208ENST00000493601 HTR3DQ70Z44 454 aa17.54■□□□□ 0.4
PTPRU-208ENST00000493601 GPRIN1Q7Z2K8 1008 aa17.54■□□□□ 0.4
PTPRU-208ENST00000493601 NAT16Q8N8M0 369 aa17.54■□□□□ 0.4
PTPRU-208ENST00000493601 TERB1Q8NA31 727 aa17.54■□□□□ 0.4
PTPRU-208ENST00000493601 TAS1R2Q8TE23 839 aa17.54■□□□□ 0.4
PTPRU-208ENST00000493601 JAKMIP2Q96AA8 810 aa17.54■□□□□ 0.4
PTPRU-208ENST00000493601 CYFIP2Q96F07 1278 aa17.54■□□□□ 0.4
PTPRU-208ENST00000493601 CCDC34Q96HJ3 373 aa17.54■□□□□ 0.4
PTPRU-208ENST00000493601 CHAMP1Q96JM3 812 aa17.54■□□□□ 0.4
PTPRU-208ENST00000493601 TWNKQ96RR1 684 aa17.54■□□□□ 0.4
PTPRU-208ENST00000493601 APOBEC3GQ9HC16 384 aaKnown RBP17.54■□□□□ 0.4
PTPRU-208ENST00000493601 LSM7Q9UK45 103 aaKnown RBP17.54■□□□□ 0.4
PTPRU-208ENST00000493601 CIZ1Q9ULV3 898 aaPredicted RBP17.54■□□□□ 0.4
PTPRU-208ENST00000493601 ZDHHC9Q9Y397 364 aa17.54■□□□□ 0.4
PTPRU-208ENST00000493601 ABCA7Q8IZY2 2146 aa17.54■□□□□ 0.4
PTPRU-208ENST00000493601 TNRC6BQ9UPQ9 1833 aaKnown RBP17.54■□□□□ 0.4
PTPRU-208ENST00000493601 TCRBV21S2A2A0A5A6 115 aa17.53■□□□□ 0.4
PTPRU-208ENST00000493601 HHLA1C9JL84 531 aa17.53■□□□□ 0.4
PTPRU-208ENST00000493601 ADAM23O75077 832 aa17.53■□□□□ 0.4
PTPRU-208ENST00000493601 CILPO75339 1184 aa17.53■□□□□ 0.4
PTPRU-208ENST00000493601 HNRNPLP14866 589 aaKnown RBP eCLIP17.53■□□□□ 0.4
PTPRU-208ENST00000493601 CD58P19256 250 aa17.53■□□□□ 0.4
PTPRU-208ENST00000493601 ACO1P21399 889 aaKnown RBP17.53■□□□□ 0.4
PTPRU-208ENST00000493601 GTF2H1P32780 548 aa17.53■□□□□ 0.4
PTPRU-208ENST00000493601 PGFP49763 221 aa17.53■□□□□ 0.4
PTPRU-208ENST00000493601 PPP3CAQ08209 521 aa17.53■□□□□ 0.4
PTPRU-208ENST00000493601 ADAM9Q13443 819 aa17.53■□□□□ 0.4
PTPRU-208ENST00000493601 BYSLQ13895 437 aaKnown RBP17.53■□□□□ 0.4
PTPRU-208ENST00000493601 C10orf76Q5T2E6 689 aa17.53■□□□□ 0.4
PTPRU-208ENST00000493601 EMC10Q5UCC4 262 aa17.53■□□□□ 0.4
PTPRU-208ENST00000493601 KLHDC10Q6PID8 442 aa17.53■□□□□ 0.4
PTPRU-208ENST00000493601 TADA2BQ86TJ2 420 aa17.53■□□□□ 0.4
PTPRU-208ENST00000493601 TMEM25Q86YD3 366 aa17.53■□□□□ 0.4
PTPRU-208ENST00000493601 ZNF513Q8N8E2 541 aaPredicted RBP17.53■□□□□ 0.4
PTPRU-208ENST00000493601 HMGB4Q8WW32 186 aa17.53■□□□□ 0.4
PTPRU-208ENST00000493601 LSM14BQ9BX40 385 aaKnown RBP17.53■□□□□ 0.4
PTPRU-208ENST00000493601 KLF16Q9BXK1 252 aaPredicted RBP17.53■□□□□ 0.4
PTPRU-208ENST00000493601 MMRN2Q9H8L6 949 aa17.53■□□□□ 0.4
PTPRU-208ENST00000493601 TMEM8AQ9HCN3 771 aa17.53■□□□□ 0.4
PTPRU-208ENST00000493601 CHD8Q9HCK8 2581 aa17.53■□□□□ 0.4
PTPRU-208ENST00000493601 LNP1A1A4G5 178 aa17.52■□□□□ 0.4
PTPRU-208ENST00000493601 NEDD8-MDP1E9PL57 170 aa17.52■□□□□ 0.4
PTPRU-208ENST00000493601 KHNYNO15037 678 aaKnown RBP17.52■□□□□ 0.4
PTPRU-208ENST00000493601 CACNG3O60359 315 aa17.52■□□□□ 0.4
PTPRU-208ENST00000493601 TBX18O95935 607 aa17.52■□□□□ 0.4
PTPRU-208ENST00000493601 P2RY2P41231 377 aa17.52■□□□□ 0.4
PTPRU-208ENST00000493601 DHPSP49366 369 aaPredicted RBP17.52■□□□□ 0.4
PTPRU-208ENST00000493601 EDRF1Q3B7T1 1238 aa17.52■□□□□ 0.4
PTPRU-208ENST00000493601 ZCWPW2Q504Y3 356 aa17.52■□□□□ 0.4
PTPRU-208ENST00000493601 KRT39Q6A163 491 aa17.52■□□□□ 0.4
PTPRU-208ENST00000493601 GRAMD4Q6IC98 578 aa17.52■□□□□ 0.4
PTPRU-208ENST00000493601 LPCAT2Q7L5N7 544 aa17.52■□□□□ 0.4
PTPRU-208ENST00000493601 TTC39CQ8N584 583 aa17.52■□□□□ 0.4
PTPRU-208ENST00000493601 WBP2Q969T9 261 aa17.52■□□□□ 0.4
PTPRU-208ENST00000493601 XPO6Q96QU8 1125 aaKnown RBP17.52■□□□□ 0.4
PTPRU-208ENST00000493601 BBS2Q9BXC9 721 aa17.52■□□□□ 0.4
PTPRU-208ENST00000493601 GOLPH3LQ9H4A5 285 aa17.52■□□□□ 0.4
PTPRU-208ENST00000493601 ZDHHC4Q9NPG8 344 aa17.52■□□□□ 0.4
PTPRU-208ENST00000493601 DNAJC17Q9NVM6 304 aaKnown RBP17.52■□□□□ 0.4
PTPRU-208ENST00000493601 OSER1Q9NX31 292 aa17.52■□□□□ 0.4
PTPRU-208ENST00000493601 WDR35Q9P2L0 1181 aa17.52■□□□□ 0.4
PTPRU-208ENST00000493601 DNMT3LQ9UJW3 386 aa17.52■□□□□ 0.4
PTPRU-208ENST00000493601 KMT2BQ9UMN6 2715 aaPredicted RBP17.52■□□□□ 0.39
PTPRU-208ENST00000493601 MYO18AQ92614 2054 aaKnown RBP17.51■□□□□ 0.39
PTPRU-208ENST00000493601 A0A1W2PQH9 124 aa17.51■□□□□ 0.39
PTPRU-208ENST00000493601 MAP3K13O43283 966 aa17.51■□□□□ 0.39
PTPRU-208ENST00000493601 STX10O60499 249 aa17.51■□□□□ 0.39
PTPRU-208ENST00000493601 GREM1O60565 184 aa17.51■□□□□ 0.39
PTPRU-208ENST00000493601 PSEN1P49768 467 aa17.51■□□□□ 0.39
PTPRU-208ENST00000493601 C10orf120Q5SQS8 335 aa17.51■□□□□ 0.39
PTPRU-208ENST00000493601 CCDC186Q7Z3E2 898 aa17.51■□□□□ 0.39
PTPRU-208ENST00000493601 PGBD3Q8N328 593 aa17.51■□□□□ 0.39
PTPRU-208ENST00000493601 FAXDC2Q96IV6 333 aa17.51■□□□□ 0.39
PTPRU-208ENST00000493601 CDK5RAP1Q96SZ6 601 aaKnown RBP17.51■□□□□ 0.39
PTPRU-208ENST00000493601 MTPAPQ9NVV4 582 aaKnown RBP eCLIP17.51■□□□□ 0.39
PTPRU-208ENST00000493601 MARK1Q9P0L2 795 aa17.51■□□□□ 0.39
PTPRU-208ENST00000493601 NAGPAQ9UK23 515 aa17.51■□□□□ 0.39
PTPRU-208ENST00000493601 ZNF202O95125 648 aa17.5■□□□□ 0.39
PTPRU-208ENST00000493601 EPB41P11171 864 aaKnown RBP17.5■□□□□ 0.39
PTPRU-208ENST00000493601 RARGP13631 454 aa17.5■□□□□ 0.39
PTPRU-208ENST00000493601 TYRP14679 529 aa17.5■□□□□ 0.39
PTPRU-208ENST00000493601 DPP6P42658 865 aa17.5■□□□□ 0.39
PTPRU-208ENST00000493601 MXI1P50539 228 aa17.5■□□□□ 0.39
PTPRU-208ENST00000493601 KIF11P52732 1056 aa17.5■□□□□ 0.39
Retrieved 100 of 20,778 RNA–protein pairs in 38.4 ms