RNA–Protein interactions for RNA: ENST00000493522.6

CTSA-209, Transcript of cathepsin A, humanhuman

TSL 2

Gene CTSA, Length 901 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTSA-209ENST00000493522 EPS8L1Q8TE68 723 aa12.18□□□□□ -0.46
CTSA-209ENST00000493522 ASB16Q96NS5 453 aa12.18□□□□□ -0.46
CTSA-209ENST00000493522 ULBP1Q9BZM6 244 aa12.18□□□□□ -0.46
CTSA-209ENST00000493522 UBXN6Q9BZV1 441 aa12.18□□□□□ -0.46
CTSA-209ENST00000493522 SMG9Q9H0W8 520 aaKnown RBP12.18□□□□□ -0.46
CTSA-209ENST00000493522 TLR8Q9NR97 1041 aaKnown RBP12.18□□□□□ -0.46
CTSA-209ENST00000493522 ZSCAN32Q9NX65 697 aa12.18□□□□□ -0.46
CTSA-209ENST00000493522 IL37Q9NZH6 218 aa12.18□□□□□ -0.46
CTSA-209ENST00000493522 PCDHGC3Q9UN70 934 aa12.18□□□□□ -0.46
CTSA-209ENST00000493522 SCML2Q9UQR0 700 aa12.18□□□□□ -0.46
CTSA-209ENST00000493522 MRPS17Q9Y2R5 130 aaKnown RBP12.18□□□□□ -0.46
CTSA-209ENST00000493522 MTF2Q9Y483 593 aaPredicted RBP12.18□□□□□ -0.46
CTSA-209ENST00000493522 COL4A3Q01955 1670 aa12.18□□□□□ -0.46
CTSA-209ENST00000493522 A0A1W2PQH9 124 aa12.17□□□□□ -0.46
CTSA-209ENST00000493522 FAM92AA1XBS5 289 aa12.17□□□□□ -0.46
CTSA-209ENST00000493522 LRRC53A6NM62 1247 aa12.17□□□□□ -0.46
CTSA-209ENST00000493522 DPYSL4O14531 572 aa12.17□□□□□ -0.46
CTSA-209ENST00000493522 PRAMEF12O95522 483 aa12.17□□□□□ -0.46
CTSA-209ENST00000493522 FERP16591 822 aa12.17□□□□□ -0.46
CTSA-209ENST00000493522 FCARP24071 287 aa12.17□□□□□ -0.46
CTSA-209ENST00000493522 PBX1P40424 430 aa12.17□□□□□ -0.46
CTSA-209ENST00000493522 VIPR2P41587 438 aa12.17□□□□□ -0.46
CTSA-209ENST00000493522 RPS9P46781 194 aaKnown RBP12.17□□□□□ -0.46
CTSA-209ENST00000493522 PDCLQ13371 301 aa12.17□□□□□ -0.46
CTSA-209ENST00000493522 ASIC2Q16515 512 aa12.17□□□□□ -0.46
CTSA-209ENST00000493522 RSPO4Q2I0M5 234 aaPredicted RBP12.17□□□□□ -0.46
CTSA-209ENST00000493522 RAB41Q5JT25 222 aa12.17□□□□□ -0.46
CTSA-209ENST00000493522 PMF1Q6P1K2 205 aa12.17□□□□□ -0.46
CTSA-209ENST00000493522 CCDC186Q7Z3E2 898 aa12.17□□□□□ -0.46
CTSA-209ENST00000493522 GAS2L3Q86XJ1 694 aa12.17□□□□□ -0.46
CTSA-209ENST00000493522 ARID3BQ8IVW6 561 aaPredicted RBP12.17□□□□□ -0.46
CTSA-209ENST00000493522 CMTM8Q8IZV2 173 aa12.17□□□□□ -0.46
CTSA-209ENST00000493522 ARL14EPQ8N8R7 260 aaPredicted RBP12.17□□□□□ -0.46
CTSA-209ENST00000493522 ZBTB44Q8NCP5 570 aa12.17□□□□□ -0.46
CTSA-209ENST00000493522 TTC16Q8NEE8 873 aa12.17□□□□□ -0.46
CTSA-209ENST00000493522 SLC20A1Q8WUM9 679 aa12.17□□□□□ -0.46
CTSA-209ENST00000493522 SLC35F5Q8WV83 523 aa12.17□□□□□ -0.46
CTSA-209ENST00000493522 KCTD13Q8WZ19 329 aa12.17□□□□□ -0.46
CTSA-209ENST00000493522 CLDN23Q96B33 292 aa12.17□□□□□ -0.46
CTSA-209ENST00000493522 NOX5Q96PH1 765 aa12.17□□□□□ -0.46
CTSA-209ENST00000493522 NUP58Q9BVL2 599 aa12.17□□□□□ -0.46
CTSA-209ENST00000493522 SLC46A2Q9BY10 475 aa12.17□□□□□ -0.46
CTSA-209ENST00000493522 NACA2Q9H009 215 aa12.17□□□□□ -0.46
CTSA-209ENST00000493522 ZFP14Q9HCL3 533 aa12.17□□□□□ -0.46
CTSA-209ENST00000493522 CHORDC1Q9UHD1 332 aaPredicted RBP12.17□□□□□ -0.46
CTSA-209ENST00000493522 NAGPAQ9UK23 515 aa12.17□□□□□ -0.46
CTSA-209ENST00000493522 NOCTQ9UK39 431 aaKnown RBP12.17□□□□□ -0.46
CTSA-209ENST00000493522 MYOFQ9NZM1 2061 aa12.17□□□□□ -0.46
CTSA-209ENST00000493522 EPG5Q9HCE0 2579 aa12.17□□□□□ -0.46
CTSA-209ENST00000493522 ITIH6Q6UXX5 1313 aa12.16□□□□□ -0.46
CTSA-209ENST00000493522 FAM170AA1A519 330 aa12.16□□□□□ -0.46
CTSA-209ENST00000493522 SOBPA7XYQ1 873 aa12.16□□□□□ -0.46
CTSA-209ENST00000493522 ZBED1O96006 694 aa12.16□□□□□ -0.46
CTSA-209ENST00000493522 OAS1P00973 400 aaKnown RBP12.16□□□□□ -0.46
CTSA-209ENST00000493522 MMEP08473 750 aa12.16□□□□□ -0.46
CTSA-209ENST00000493522 CCDC172P0C7W6 258 aa12.16□□□□□ -0.46
CTSA-209ENST00000493522 MBL2P11226 248 aaPredicted RBP12.16□□□□□ -0.46
CTSA-209ENST00000493522 HDCP19113 662 aa12.16□□□□□ -0.46
CTSA-209ENST00000493522 TARSP26639 723 aaKnown RBP12.16□□□□□ -0.46
CTSA-209ENST00000493522 GPD2P43304 727 aa12.16□□□□□ -0.46
CTSA-209ENST00000493522 PSEN1P49768 467 aa12.16□□□□□ -0.46
CTSA-209ENST00000493522 GRM2Q14416 872 aa12.16□□□□□ -0.46
CTSA-209ENST00000493522 FIGNQ5HY92 759 aa12.16□□□□□ -0.46
CTSA-209ENST00000493522 HECTD3Q5T447 861 aa12.16□□□□□ -0.46
CTSA-209ENST00000493522 TANGO2Q6ICL3 276 aa12.16□□□□□ -0.46
CTSA-209ENST00000493522 ZNF677Q86XU0 584 aa12.16□□□□□ -0.46
CTSA-209ENST00000493522 FMNL3Q8IVF7 1028 aa12.16□□□□□ -0.46
CTSA-209ENST00000493522 ARHGAP18Q8N392 663 aa12.16□□□□□ -0.46
CTSA-209ENST00000493522 IPO4Q8TEX9 1081 aaKnown RBP12.16□□□□□ -0.46
CTSA-209ENST00000493522 BAP1Q92560 729 aa12.16□□□□□ -0.46
CTSA-209ENST00000493522 NDRG1Q92597 394 aaKnown RBP12.16□□□□□ -0.46
CTSA-209ENST00000493522 DNASE1L2Q92874 299 aa12.16□□□□□ -0.46
CTSA-209ENST00000493522 ELSPBP1Q96BH3 223 aa12.16□□□□□ -0.46
CTSA-209ENST00000493522 HSFY1Q96LI6 401 aa12.16□□□□□ -0.46
CTSA-209ENST00000493522 SLC22A12Q96S37 553 aa12.16□□□□□ -0.46
CTSA-209ENST00000493522 FAM126AQ9BYI3 521 aaPredicted RBP12.16□□□□□ -0.46
CTSA-209ENST00000493522 TRIM5Q9C035 493 aa12.16□□□□□ -0.46
CTSA-209ENST00000493522 TTYH3Q9C0H2 523 aa12.16□□□□□ -0.46
CTSA-209ENST00000493522 MIS12Q9H081 205 aa12.16□□□□□ -0.46
CTSA-209ENST00000493522 EPC1Q9H2F5 836 aa12.16□□□□□ -0.46
CTSA-209ENST00000493522 SYNCQ9H7C4 482 aa12.16□□□□□ -0.46
CTSA-209ENST00000493522 CCSER2Q9H7U1 834 aa12.16□□□□□ -0.46
CTSA-209ENST00000493522 KIF9Q9HAQ2 790 aa12.16□□□□□ -0.46
CTSA-209ENST00000493522 NMUR1Q9HB89 426 aa12.16□□□□□ -0.46
CTSA-209ENST00000493522 CNGB3Q9NQW8 809 aa12.16□□□□□ -0.46
CTSA-209ENST00000493522 HEBP1Q9NRV9 189 aa12.16□□□□□ -0.46
CTSA-209ENST00000493522 SEPT11Q9NVA2 429 aaKnown RBP12.16□□□□□ -0.46
CTSA-209ENST00000493522 CYTH4Q9UIA0 394 aa12.16□□□□□ -0.46
CTSA-209ENST00000493522 MYO6Q9UM54 1294 aa12.16□□□□□ -0.46
CTSA-209ENST00000493522 SMG5Q9UPR3 1016 aaKnown RBP12.16□□□□□ -0.46
CTSA-209ENST00000493522 USP3Q9Y6I4 520 aa12.16□□□□□ -0.46
CTSA-209ENST00000493522 KIAA1549LQ6ZVL6 1849 aa12.16□□□□□ -0.46
CTSA-209ENST00000493522 HEPACAM2A8MVW5 462 aa12.15□□□□□ -0.46
CTSA-209ENST00000493522 PRR5-ARHGAP8B1AHC4 643 aa12.15□□□□□ -0.46
CTSA-209ENST00000493522 E5RJQ4 531 aa12.15□□□□□ -0.46
CTSA-209ENST00000493522 TLR5O60602 858 aa12.15□□□□□ -0.46
CTSA-209ENST00000493522 LILRB5O75023 590 aa12.15□□□□□ -0.46
CTSA-209ENST00000493522 FBXO21O94952 628 aa12.15□□□□□ -0.46
CTSA-209ENST00000493522 ZDHHC11BP0C7U3 371 aa12.15□□□□□ -0.46
CTSA-209ENST00000493522 RALAP11233 206 aa12.15□□□□□ -0.46
Retrieved 100 of 20,778 RNA–protein pairs in 20.3 ms