RNA–Protein interactions for RNA: ENST00000493348.1

TM4SF1-204, Transcript of transmembrane 4 L six family member 1, humanhuman

TSL 2

Gene TM4SF1, Length 976 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TM4SF1-204ENST00000493348 SH3RF2Q8TEC5 729 aa8.53□□□□□ -1.04
TM4SF1-204ENST00000493348 SLC35F5Q8WV83 523 aa8.53□□□□□ -1.04
TM4SF1-204ENST00000493348 EDAQ92838 391 aa8.53□□□□□ -1.04
TM4SF1-204ENST00000493348 CYP2S1Q96SQ9 504 aa8.53□□□□□ -1.04
TM4SF1-204ENST00000493348 SMG9Q9H0W8 520 aaKnown RBP8.53□□□□□ -1.04
TM4SF1-204ENST00000493348 CCSER2Q9H7U1 834 aa8.53□□□□□ -1.04
TM4SF1-204ENST00000493348 ACP6Q9NPH0 428 aa8.53□□□□□ -1.04
TM4SF1-204ENST00000493348 SMPD4Q9NXE4 827 aa8.53□□□□□ -1.04
TM4SF1-204ENST00000493348 IL37Q9NZH6 218 aa8.53□□□□□ -1.04
TM4SF1-204ENST00000493348 ARHGAP26Q9UNA1 814 aa8.53□□□□□ -1.04
TM4SF1-204ENST00000493348 ZNF510Q9Y2H8 683 aa8.53□□□□□ -1.04
TM4SF1-204ENST00000493348 BZW2Q9Y6E2 419 aaKnown RBP8.53□□□□□ -1.04
TM4SF1-204ENST00000493348 USP3Q9Y6I4 520 aa8.53□□□□□ -1.04
TM4SF1-204ENST00000493348 ITIH6Q6UXX5 1313 aa8.53□□□□□ -1.04
TM4SF1-204ENST00000493348 TICRRQ7Z2Z1 1910 aa8.52□□□□□ -1.04
TM4SF1-204ENST00000493348 A0A1W2PQJ5 194 aa8.52□□□□□ -1.05
TM4SF1-204ENST00000493348 FAM92AA1XBS5 289 aa8.52□□□□□ -1.05
TM4SF1-204ENST00000493348 E5RJQ4 531 aa8.52□□□□□ -1.05
TM4SF1-204ENST00000493348 LEFTY2O00292 366 aa8.52□□□□□ -1.05
TM4SF1-204ENST00000493348 TULP2O00295 520 aa8.52□□□□□ -1.05
TM4SF1-204ENST00000493348 EPHB6O15197 1021 aa8.52□□□□□ -1.05
TM4SF1-204ENST00000493348 COCHO43405 550 aa8.52□□□□□ -1.05
TM4SF1-204ENST00000493348 TADA3O75528 432 aa8.52□□□□□ -1.05
TM4SF1-204ENST00000493348 NFATC1O95644 943 aa8.52□□□□□ -1.05
TM4SF1-204ENST00000493348 OAS1P00973 400 aaKnown RBP8.52□□□□□ -1.05
TM4SF1-204ENST00000493348 CALB1P05937 261 aa8.52□□□□□ -1.05
TM4SF1-204ENST00000493348 MMEP08473 750 aa8.52□□□□□ -1.05
TM4SF1-204ENST00000493348 ZDHHC11BP0C7U3 371 aa8.52□□□□□ -1.05
TM4SF1-204ENST00000493348 NCAM1P13591 858 aa8.52□□□□□ -1.05
TM4SF1-204ENST00000493348 GBP1P32455 592 aa8.52□□□□□ -1.05
TM4SF1-204ENST00000493348 HARS2P49590 506 aaKnown RBP8.52□□□□□ -1.05
TM4SF1-204ENST00000493348 DAOAP59103 153 aa8.52□□□□□ -1.05
TM4SF1-204ENST00000493348 SLC7A9P82251 487 aa8.52□□□□□ -1.05
TM4SF1-204ENST00000493348 ZBED6P86452 979 aa8.52□□□□□ -1.05
TM4SF1-204ENST00000493348 MTF1Q14872 753 aa8.52□□□□□ -1.05
TM4SF1-204ENST00000493348 PDGFRLQ15198 375 aa8.52□□□□□ -1.05
TM4SF1-204ENST00000493348 PKDCCQ504Y2 493 aa8.52□□□□□ -1.05
TM4SF1-204ENST00000493348 PM20D1Q6GTS8 502 aa8.52□□□□□ -1.05
TM4SF1-204ENST00000493348 VITQ6UXI7 678 aa8.52□□□□□ -1.05
TM4SF1-204ENST00000493348 SND1Q7KZF4 910 aaKnown RBP eCLIP8.52□□□□□ -1.057e-19■■■□□ 18.1
TM4SF1-204ENST00000493348 TMEM150AQ86TG1 271 aa8.52□□□□□ -1.05
TM4SF1-204ENST00000493348 NOP9Q86U38 636 aaKnown RBP8.52□□□□□ -1.05
TM4SF1-204ENST00000493348 MIB1Q86YT6 1006 aa8.52□□□□□ -1.05
TM4SF1-204ENST00000493348 SUGP1Q8IWZ8 645 aaKnown RBP8.52□□□□□ -1.05
TM4SF1-204ENST00000493348 SCML4Q8N228 414 aa8.52□□□□□ -1.05
TM4SF1-204ENST00000493348 CPA6Q8N4T0 437 aa8.52□□□□□ -1.05
TM4SF1-204ENST00000493348 EPS8L1Q8TE68 723 aa8.52□□□□□ -1.05
TM4SF1-204ENST00000493348 DNASE1L2Q92874 299 aa8.52□□□□□ -1.05
TM4SF1-204ENST00000493348 USP13Q92995 863 aaPredicted RBP8.52□□□□□ -1.05
TM4SF1-204ENST00000493348 ATP2A3Q93084 1043 aa8.52□□□□□ -1.05
TM4SF1-204ENST00000493348 RNF34Q969K3 372 aa8.52□□□□□ -1.05
TM4SF1-204ENST00000493348 C18orf8Q96DM3 657 aa8.52□□□□□ -1.05
TM4SF1-204ENST00000493348 AGPAT1Q99943 283 aa8.52□□□□□ -1.05
TM4SF1-204ENST00000493348 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP8.52□□□□□ -1.05
TM4SF1-204ENST00000493348 C1QTNF1Q9BXJ1 281 aa8.52□□□□□ -1.05
TM4SF1-204ENST00000493348 DCLK3Q9C098 648 aa8.52□□□□□ -1.05
TM4SF1-204ENST00000493348 DEF6Q9H4E7 631 aa8.52□□□□□ -1.05
TM4SF1-204ENST00000493348 CD320Q9NPF0 282 aa8.52□□□□□ -1.05
TM4SF1-204ENST00000493348 MTPAPQ9NVV4 582 aaKnown RBP eCLIP8.52□□□□□ -1.05
TM4SF1-204ENST00000493348 DUS2Q9NX74 493 aaKnown RBP8.52□□□□□ -1.05
TM4SF1-204ENST00000493348 MARCH2Q9P0N8 246 aa8.52□□□□□ -1.05
TM4SF1-204ENST00000493348 CFAP97Q9P2B7 532 aa8.52□□□□□ -1.05
TM4SF1-204ENST00000493348 TBC1D14Q9P2M4 693 aa8.52□□□□□ -1.05
TM4SF1-204ENST00000493348 SLC12A6Q9UHW9 1150 aa8.52□□□□□ -1.05
TM4SF1-204ENST00000493348 CA14Q9ULX7 337 aa8.52□□□□□ -1.05
TM4SF1-204ENST00000493348 MRPS17Q9Y2R5 130 aaKnown RBP8.52□□□□□ -1.05
TM4SF1-204ENST00000493348 CUL9Q8IWT3 2517 aa8.52□□□□□ -1.05
TM4SF1-204ENST00000493348 KIF26AQ9ULI4 1882 aaPredicted RBP8.51□□□□□ -1.05
TM4SF1-204ENST00000493348 SLC12A8A0AV02 714 aa8.51□□□□□ -1.05
TM4SF1-204ENST00000493348 PI4K2BG5E9Z4 385 aa8.51□□□□□ -1.05
TM4SF1-204ENST00000493348 MAN2B1O00754 1011 aa8.51□□□□□ -1.05
TM4SF1-204ENST00000493348 NCAM2O15394 837 aa8.51□□□□□ -1.05
TM4SF1-204ENST00000493348 HSF2BPO75031 334 aa8.51□□□□□ -1.05
TM4SF1-204ENST00000493348 PRAMEF12O95522 483 aa8.51□□□□□ -1.05
TM4SF1-204ENST00000493348 HMBSP08397 361 aa8.51□□□□□ -1.05
TM4SF1-204ENST00000493348 FCARP24071 287 aa8.51□□□□□ -1.05
TM4SF1-204ENST00000493348 YWHAZP63104 245 aaKnown RBP8.51□□□□□ -1.05
TM4SF1-204ENST00000493348 GPC5P78333 572 aa8.51□□□□□ -1.05
TM4SF1-204ENST00000493348 CDK17Q00537 523 aa8.51□□□□□ -1.05
TM4SF1-204ENST00000493348 PREPLQ4J6C6 727 aaPredicted RBP8.51□□□□□ -1.05
TM4SF1-204ENST00000493348 FAM102AQ5T9C2 384 aaPredicted RBP8.51□□□□□ -1.05
TM4SF1-204ENST00000493348 NAA35Q5VZE5 725 aa8.51□□□□□ -1.05
TM4SF1-204ENST00000493348 BSPRYQ5W0U4 402 aa8.51□□□□□ -1.05
TM4SF1-204ENST00000493348 DPY19L2P1Q6NXN4 242 aa8.51□□□□□ -1.05
TM4SF1-204ENST00000493348 KLHDC10Q6PID8 442 aa8.51□□□□□ -1.05
TM4SF1-204ENST00000493348 C1orf228Q6PIY5 440 aa8.51□□□□□ -1.05
TM4SF1-204ENST00000493348 SARM1Q6SZW1 724 aa8.51□□□□□ -1.05
TM4SF1-204ENST00000493348 TRIM67Q6ZTA4 783 aa8.51□□□□□ -1.05
TM4SF1-204ENST00000493348 TMC6Q7Z403 805 aa8.51□□□□□ -1.05
TM4SF1-204ENST00000493348 TMEM110Q86TL2 294 aa8.51□□□□□ -1.05
TM4SF1-204ENST00000493348 CNGA4Q8IV77 575 aa8.51□□□□□ -1.05
TM4SF1-204ENST00000493348 SCUBE3Q8IX30 993 aa8.51□□□□□ -1.05
TM4SF1-204ENST00000493348 SIX5Q8N196 739 aa8.51□□□□□ -1.05
TM4SF1-204ENST00000493348 SLC20A1Q8WUM9 679 aa8.51□□□□□ -1.05
TM4SF1-204ENST00000493348 OSCP1Q8WVF1 389 aa8.51□□□□□ -1.05
TM4SF1-204ENST00000493348 CPA5Q8WXQ8 436 aa8.51□□□□□ -1.05
TM4SF1-204ENST00000493348 EDEM1Q92611 657 aa8.51□□□□□ -1.05
TM4SF1-204ENST00000493348 OTUB2Q96DC9 234 aa8.51□□□□□ -1.05
TM4SF1-204ENST00000493348 MSANTD3Q96H12 275 aa8.51□□□□□ -1.05
TM4SF1-204ENST00000493348 SERPINB11Q96P15 392 aa8.51□□□□□ -1.05
Retrieved 100 of 20,778 RNA–protein pairs in 18 ms