RNA–Protein interactions for RNA: ENST00000493265.2

LIME1-208, Transcript of Lck interacting transmembrane adaptor 1, humanhuman

APPRIS ALT2 TSL 2

Gene LIME1, Length 661 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIME1-208ENST00000493265 TLR8Q9NR97 1041 aaKnown RBP18.03■□□□□ 0.48
LIME1-208ENST00000493265 METTL5Q9NRN9 209 aaKnown RBP18.03■□□□□ 0.48
LIME1-208ENST00000493265 TFR2Q9UP52 801 aa18.03■□□□□ 0.48
LIME1-208ENST00000493265 PCDHA13Q9Y5I0 950 aa18.03■□□□□ 0.48
LIME1-208ENST00000493265 GREB1Q4ZG55 1949 aa18.03■□□□□ 0.48
LIME1-208ENST00000493265 NRG2O14511 850 aaPredicted RBP18.02■□□□□ 0.48
LIME1-208ENST00000493265 F11P03951 625 aa18.02■□□□□ 0.48
LIME1-208ENST00000493265 CCR2P41597 374 aa18.02■□□□□ 0.48
LIME1-208ENST00000493265 ITIH3Q06033 890 aa18.02■□□□□ 0.48
LIME1-208ENST00000493265 ZNF268Q14587 947 aaPredicted RBP18.02■□□□□ 0.48
LIME1-208ENST00000493265 SLC5A9Q2M3M2 681 aa18.02■□□□□ 0.48
LIME1-208ENST00000493265 ATAT1Q5SQI0 421 aa18.02■□□□□ 0.48
LIME1-208ENST00000493265 BTBD8Q5XKL5 378 aa18.02■□□□□ 0.48
LIME1-208ENST00000493265 PM20D1Q6GTS8 502 aa18.02■□□□□ 0.48
LIME1-208ENST00000493265 OLFML1Q6UWY5 402 aa18.02■□□□□ 0.48
LIME1-208ENST00000493265 GAREM2Q75VX8 874 aa18.02■□□□□ 0.48
LIME1-208ENST00000493265 SCD5Q86SK9 330 aa18.02■□□□□ 0.48
LIME1-208ENST00000493265 TRIM11Q96F44 468 aa18.02■□□□□ 0.48
LIME1-208ENST00000493265 SELENOOQ9BVL4 669 aa18.02■□□□□ 0.48
LIME1-208ENST00000493265 S1PR5Q9H228 398 aa18.02■□□□□ 0.48
LIME1-208ENST00000493265 NMUR1Q9HB89 426 aa18.02■□□□□ 0.48
LIME1-208ENST00000493265 NUDT5Q9UKK9 219 aa18.02■□□□□ 0.48
LIME1-208ENST00000493265 MRPS23Q9Y3D9 190 aaKnown RBP18.02■□□□□ 0.48
LIME1-208ENST00000493265 USP15Q9Y4E8 981 aaPredicted RBP18.02■□□□□ 0.48
LIME1-208ENST00000493265 ANKRD62A6NC57 917 aa18.01■□□□□ 0.47
LIME1-208ENST00000493265 SART1O43290 800 aaKnown RBP18.01■□□□□ 0.47
LIME1-208ENST00000493265 TADA3O75528 432 aa18.01■□□□□ 0.47
LIME1-208ENST00000493265 LCA5LO95447 670 aa18.01■□□□□ 0.47
LIME1-208ENST00000493265 LTFP02788 710 aa18.01■□□□□ 0.47
LIME1-208ENST00000493265 POU2F2P09086 479 aa18.01■□□□□ 0.47
LIME1-208ENST00000493265 CDC25CP30307 473 aa18.01■□□□□ 0.47
LIME1-208ENST00000493265 GPC5P78333 572 aa18.01■□□□□ 0.47
LIME1-208ENST00000493265 TEAD2Q15562 447 aa18.01■□□□□ 0.47
LIME1-208ENST00000493265 EFHC1Q5JVL4 640 aa18.01■□□□□ 0.47
LIME1-208ENST00000493265 BSPRYQ5W0U4 402 aa18.01■□□□□ 0.47
LIME1-208ENST00000493265 BHLHA9Q7RTU4 235 aa18.01■□□□□ 0.47
LIME1-208ENST00000493265 KIAA1328Q86T90 577 aa18.01■□□□□ 0.47
LIME1-208ENST00000493265 TMEM150AQ86TG1 271 aa18.01■□□□□ 0.47
LIME1-208ENST00000493265 MON1AQ86VX9 555 aa18.01■□□□□ 0.47
LIME1-208ENST00000493265 ZDHHC17Q8IUH5 632 aa18.01■□□□□ 0.47
LIME1-208ENST00000493265 PDZD8Q8NEN9 1154 aa18.01■□□□□ 0.47
LIME1-208ENST00000493265 ITFG1Q8TB96 612 aa18.01■□□□□ 0.47
LIME1-208ENST00000493265 SHKBP1Q8TBC3 707 aa18.01■□□□□ 0.47
LIME1-208ENST00000493265 CTNNBL1Q8WYA6 563 aaPredicted RBP18.01■□□□□ 0.47
LIME1-208ENST00000493265 IRGQQ8WZA9 623 aa18.01■□□□□ 0.47
LIME1-208ENST00000493265 MRPS31Q92665 395 aaKnown RBP18.01■□□□□ 0.47
LIME1-208ENST00000493265 ARHGEF26Q96DR7 871 aa18.01■□□□□ 0.47
LIME1-208ENST00000493265 MCRS1Q96EZ8 462 aa18.01■□□□□ 0.47
LIME1-208ENST00000493265 VCPIP1Q96JH7 1222 aa18.01■□□□□ 0.47
LIME1-208ENST00000493265 RIPOR3Q96MK2 946 aa18.01■□□□□ 0.47
LIME1-208ENST00000493265 LUC7LQ9NQ29 371 aaKnown RBP18.01■□□□□ 0.47
LIME1-208ENST00000493265 OSER1Q9NX31 292 aa18.01■□□□□ 0.47
LIME1-208ENST00000493265 WDR35Q9P2L0 1181 aa18.01■□□□□ 0.47
LIME1-208ENST00000493265 REXO2Q9Y3B8 237 aaKnown RBP18.01■□□□□ 0.47
LIME1-208ENST00000493265 ZNF638Q14966 1978 aaKnown RBP18■□□□□ 0.47
LIME1-208ENST00000493265 C2orf16Q68DN1 1984 aa18■□□□□ 0.47
LIME1-208ENST00000493265 FAM92AA1XBS5 289 aa18■□□□□ 0.47
LIME1-208ENST00000493265 ZNF840PA6NDX5 716 aa18■□□□□ 0.47
LIME1-208ENST00000493265 TMEM221A6NGB7 291 aa18■□□□□ 0.47
LIME1-208ENST00000493265 M0R296 226 aa18■□□□□ 0.47
LIME1-208ENST00000493265 CAPN9O14815 690 aa18■□□□□ 0.47
LIME1-208ENST00000493265 FGF19O95750 216 aa18■□□□□ 0.47
LIME1-208ENST00000493265 MYBL1P10243 752 aa18■□□□□ 0.47
LIME1-208ENST00000493265 CEBPBP17676 345 aa18■□□□□ 0.47
LIME1-208ENST00000493265 FSHRP23945 695 aa18■□□□□ 0.47
LIME1-208ENST00000493265 EPHA5P54756 1037 aa18■□□□□ 0.47
LIME1-208ENST00000493265 YWHAZP63104 245 aaKnown RBP18■□□□□ 0.47
LIME1-208ENST00000493265 KRT83P78385 493 aa18■□□□□ 0.47
LIME1-208ENST00000493265 C10orf76Q5T2E6 689 aa18■□□□□ 0.47
LIME1-208ENST00000493265 STXBP5Q5T5C0 1151 aa18■□□□□ 0.47
LIME1-208ENST00000493265 TXNDC8Q6A555 127 aa18■□□□□ 0.47
LIME1-208ENST00000493265 RSRC2Q7L4I2 434 aaKnown RBP18■□□□□ 0.47
LIME1-208ENST00000493265 GET4Q7L5D6 327 aaPredicted RBP18■□□□□ 0.47
LIME1-208ENST00000493265 ARHGAP18Q8N392 663 aa18■□□□□ 0.47
LIME1-208ENST00000493265 EMC1Q8N766 993 aa18■□□□□ 0.47
LIME1-208ENST00000493265 LEMD2Q8NC56 503 aa18■□□□□ 0.47
LIME1-208ENST00000493265 OVCA2Q8WZ82 227 aa18■□□□□ 0.47
LIME1-208ENST00000493265 SLITRK6Q9H5Y7 841 aa18■□□□□ 0.47
LIME1-208ENST00000493265 CCSER2Q9H7U1 834 aa18■□□□□ 0.47
LIME1-208ENST00000493265 PARVAQ9NVD7 372 aa18■□□□□ 0.47
LIME1-208ENST00000493265 KMT2EQ8IZD2 1858 aa18■□□□□ 0.47
LIME1-208ENST00000493265 CLUHO75153 1309 aa17.99■□□□□ 0.47
LIME1-208ENST00000493265 C2orf78A6NCI8 922 aa17.99■□□□□ 0.47
LIME1-208ENST00000493265 LOC730098B7Z3J9 87 aa17.99■□□□□ 0.47
LIME1-208ENST00000493265 ZNF197O14709 1029 aa17.99■□□□□ 0.47
LIME1-208ENST00000493265 TMEM253P0C7T8 217 aa17.99■□□□□ 0.47
LIME1-208ENST00000493265 RALAP11233 206 aa17.99■□□□□ 0.47
LIME1-208ENST00000493265 KRT3P12035 628 aa17.99■□□□□ 0.47
LIME1-208ENST00000493265 NCAM1P13591 858 aa17.99■□□□□ 0.47
LIME1-208ENST00000493265 RARGP13631 454 aa17.99■□□□□ 0.47
LIME1-208ENST00000493265 MTHFRP42898 656 aa17.99■□□□□ 0.47
LIME1-208ENST00000493265 ARHGAP15Q53QZ3 475 aa17.99■□□□□ 0.47
LIME1-208ENST00000493265 PRSS36Q5K4E3 855 aa17.99■□□□□ 0.47
LIME1-208ENST00000493265 GPR158Q5T848 1215 aa17.99■□□□□ 0.47
LIME1-208ENST00000493265 DCUN1D2Q6PH85 259 aa17.99■□□□□ 0.47
LIME1-208ENST00000493265 TRIM67Q6ZTA4 783 aa17.99■□□□□ 0.47
LIME1-208ENST00000493265 SLC26A9Q7LBE3 791 aa17.99■□□□□ 0.47
LIME1-208ENST00000493265 DEFB106AQ8N104 65 aa17.99■□□□□ 0.47
LIME1-208ENST00000493265 SCML4Q8N228 414 aa17.99■□□□□ 0.47
LIME1-208ENST00000493265 MAB21L3Q8N8X9 362 aa17.99■□□□□ 0.47
Retrieved 100 of 20,778 RNA–protein pairs in 23.3 ms