RNA–Protein interactions for RNA: ENST00000492851.1

COL6A1-205, Transcript of collagen type VI alpha 1 chain, humanhuman

TSL 3

Gene COL6A1, Length 435 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL6A1-205ENST00000492851 HOXC13P31276 330 aa13.13□□□□□ -0.31
COL6A1-205ENST00000492851 TIE1P35590 1138 aa13.13□□□□□ -0.31
COL6A1-205ENST00000492851 KIR2DL1P43626 348 aaPredicted RBP13.13□□□□□ -0.31
COL6A1-205ENST00000492851 MXI1P50539 228 aa13.13□□□□□ -0.31
COL6A1-205ENST00000492851 KIF11P52732 1056 aa13.13□□□□□ -0.31
COL6A1-205ENST00000492851 YWHAEP62258 255 aaKnown RBP13.13□□□□□ -0.31
COL6A1-205ENST00000492851 COG7P83436 770 aa13.13□□□□□ -0.31
COL6A1-205ENST00000492851 FKBP3Q00688 224 aaKnown RBP13.13□□□□□ -0.31
COL6A1-205ENST00000492851 CREB5Q02930 508 aa13.13□□□□□ -0.31
COL6A1-205ENST00000492851 ORC1Q13415 861 aa13.13□□□□□ -0.31
COL6A1-205ENST00000492851 PPM1JQ5JR12 505 aa13.13□□□□□ -0.31
COL6A1-205ENST00000492851 ZNF658Q5TYW1 1059 aaPredicted RBP13.13□□□□□ -0.31
COL6A1-205ENST00000492851 CCDC186Q7Z3E2 898 aa13.13□□□□□ -0.31
COL6A1-205ENST00000492851 BBS7Q8IWZ6 715 aa13.13□□□□□ -0.31
COL6A1-205ENST00000492851 ETFBKMTQ8IXQ9 262 aa13.13□□□□□ -0.31
COL6A1-205ENST00000492851 CCDC33Q8N5R6 958 aa13.13□□□□□ -0.31
COL6A1-205ENST00000492851 ALLCQ8N6M5 410 aa13.13□□□□□ -0.31
COL6A1-205ENST00000492851 TXNDC5Q8NBS9 432 aaKnown RBP13.13□□□□□ -0.31
COL6A1-205ENST00000492851 ELMO3Q96BJ8 720 aa13.13□□□□□ -0.31
COL6A1-205ENST00000492851 TMEM176AQ96HP8 235 aa13.13□□□□□ -0.31
COL6A1-205ENST00000492851 KLF16Q9BXK1 252 aaPredicted RBP13.13□□□□□ -0.31
COL6A1-205ENST00000492851 MMRN2Q9H8L6 949 aa13.13□□□□□ -0.31
COL6A1-205ENST00000492851 APOBEC3GQ9HC16 384 aaKnown RBP13.13□□□□□ -0.31
COL6A1-205ENST00000492851 POLR3BQ9NW08 1133 aaPredicted RBP13.13□□□□□ -0.31
COL6A1-205ENST00000492851 HMGXB4Q9UGU5 601 aa13.13□□□□□ -0.31
COL6A1-205ENST00000492851 GREB1Q4ZG55 1949 aa13.13□□□□□ -0.31
COL6A1-205ENST00000492851 PTPRDP23468 1912 aa13.12□□□□□ -0.31
COL6A1-205ENST00000492851 HHLA1C9JL84 531 aa13.12□□□□□ -0.31
COL6A1-205ENST00000492851 KHNYNO15037 678 aaKnown RBP13.12□□□□□ -0.31
COL6A1-205ENST00000492851 SLC16A3O15427 465 aaKnown RBP13.12□□□□□ -0.31
COL6A1-205ENST00000492851 MAP3K13O43283 966 aa13.12□□□□□ -0.31
COL6A1-205ENST00000492851 GDF9O60383 454 aa13.12□□□□□ -0.31
COL6A1-205ENST00000492851 TULP3O75386 442 aa13.12□□□□□ -0.31
COL6A1-205ENST00000492851 KLF8O95600 359 aaPredicted RBP13.12□□□□□ -0.31
COL6A1-205ENST00000492851 ADRB1P08588 477 aa13.12□□□□□ -0.31
COL6A1-205ENST00000492851 CHKAP35790 457 aa13.12□□□□□ -0.31
COL6A1-205ENST00000492851 PPP1R2P41236 205 aa13.12□□□□□ -0.31
COL6A1-205ENST00000492851 LRRC63Q05C16 580 aa13.12□□□□□ -0.31
COL6A1-205ENST00000492851 STIM1Q13586 685 aa13.12□□□□□ -0.31
COL6A1-205ENST00000492851 SF3A2Q15428 464 aaKnown RBP13.12□□□□□ -0.31
COL6A1-205ENST00000492851 STPG1Q5TH74 334 aa13.12□□□□□ -0.31
COL6A1-205ENST00000492851 PMS2CLQ68D20 193 aa13.12□□□□□ -0.31
COL6A1-205ENST00000492851 LPCAT2Q7L5N7 544 aa13.12□□□□□ -0.31
COL6A1-205ENST00000492851 TMEM25Q86YD3 366 aa13.12□□□□□ -0.31
COL6A1-205ENST00000492851 ZNF513Q8N8E2 541 aaPredicted RBP13.12□□□□□ -0.31
COL6A1-205ENST00000492851 NAT16Q8N8M0 369 aa13.12□□□□□ -0.31
COL6A1-205ENST00000492851 TERB1Q8NA31 727 aa13.12□□□□□ -0.31
COL6A1-205ENST00000492851 MDGA1Q8NFP4 955 aa13.12□□□□□ -0.31
COL6A1-205ENST00000492851 OLIG1Q8TAK6 271 aa13.12□□□□□ -0.31
COL6A1-205ENST00000492851 TIGD1Q96MW7 591 aa13.12□□□□□ -0.31
COL6A1-205ENST00000492851 TWNKQ96RR1 684 aa13.12□□□□□ -0.31
COL6A1-205ENST00000492851 DCLK3Q9C098 648 aa13.12□□□□□ -0.31
COL6A1-205ENST00000492851 GOLPH3LQ9H4A5 285 aa13.12□□□□□ -0.31
COL6A1-205ENST00000492851 CISHQ9NSE2 258 aa13.12□□□□□ -0.31
COL6A1-205ENST00000492851 MTPAPQ9NVV4 582 aaKnown RBP eCLIP13.12□□□□□ -0.31
COL6A1-205ENST00000492851 MARK1Q9P0L2 795 aa13.12□□□□□ -0.31
COL6A1-205ENST00000492851 BCCIPQ9P287 314 aaKnown RBP eCLIP13.12□□□□□ -0.31
COL6A1-205ENST00000492851 NAGPAQ9UK23 515 aa13.12□□□□□ -0.31
COL6A1-205ENST00000492851 KIAA1257Q9ULG3 409 aa13.12□□□□□ -0.31
COL6A1-205ENST00000492851 USP3Q9Y6I4 520 aa13.12□□□□□ -0.31
COL6A1-205ENST00000492851 ANAPC1Q9H1A4 1944 aa13.11□□□□□ -0.31
COL6A1-205ENST00000492851 SGK1O00141 431 aa13.11□□□□□ -0.31
COL6A1-205ENST00000492851 SCAMP3O14828 347 aaKnown RBP13.11□□□□□ -0.31
COL6A1-205ENST00000492851 DCLK1O15075 740 aa13.11□□□□□ -0.31
COL6A1-205ENST00000492851 TBX18O95935 607 aa13.11□□□□□ -0.31
COL6A1-205ENST00000492851 IRF1P10914 325 aa13.11□□□□□ -0.31
COL6A1-205ENST00000492851 NTSR1P30989 418 aa13.11□□□□□ -0.31
COL6A1-205ENST00000492851 KDSRQ06136 332 aa13.11□□□□□ -0.31
COL6A1-205ENST00000492851 C10orf120Q5SQS8 335 aa13.11□□□□□ -0.31
COL6A1-205ENST00000492851 C10orf76Q5T2E6 689 aa13.11□□□□□ -0.31
COL6A1-205ENST00000492851 PPP1R26Q5T8A7 1209 aaPredicted RBP13.11□□□□□ -0.31
COL6A1-205ENST00000492851 RNF43Q68DV7 783 aa13.11□□□□□ -0.31
COL6A1-205ENST00000492851 ARHGAP17Q68EM7 881 aa13.11□□□□□ -0.31
COL6A1-205ENST00000492851 GRAMD4Q6IC98 578 aa13.11□□□□□ -0.31
COL6A1-205ENST00000492851 TMEM92Q6UXU6 159 aa13.11□□□□□ -0.31
COL6A1-205ENST00000492851 C12orf40Q86WS4 652 aa13.11□□□□□ -0.31
COL6A1-205ENST00000492851 TTC30AQ86WT1 665 aa13.11□□□□□ -0.31
COL6A1-205ENST00000492851 ELOA2Q8IYF1 753 aaPredicted RBP13.11□□□□□ -0.31
COL6A1-205ENST00000492851 FMR1NBQ8N0W7 255 aaPredicted RBP13.11□□□□□ -0.31
COL6A1-205ENST00000492851 PGBD3Q8N328 593 aa13.11□□□□□ -0.31
COL6A1-205ENST00000492851 PHTF2Q8N3S3 785 aa13.11□□□□□ -0.31
COL6A1-205ENST00000492851 ANKRD52Q8NB46 1076 aa13.11□□□□□ -0.31
COL6A1-205ENST00000492851 BBS2Q9BXC9 721 aa13.11□□□□□ -0.31
COL6A1-205ENST00000492851 TPSD1Q9BZJ3 242 aa13.11□□□□□ -0.31
COL6A1-205ENST00000492851 METTL14Q9HCE5 456 aaKnown RBP13.11□□□□□ -0.31
COL6A1-205ENST00000492851 DNAJC17Q9NVM6 304 aaKnown RBP13.11□□□□□ -0.31
COL6A1-205ENST00000492851 A0A1W2PQH9 124 aa13.1□□□□□ -0.31
COL6A1-205ENST00000492851 NEDD8-MDP1E9PL57 170 aa13.1□□□□□ -0.31
COL6A1-205ENST00000492851 TM4SF5O14894 197 aa13.1□□□□□ -0.31
COL6A1-205ENST00000492851 NPC1O15118 1278 aa13.1□□□□□ -0.31
COL6A1-205ENST00000492851 CYP26A1O43174 497 aa13.1□□□□□ -0.31
COL6A1-205ENST00000492851 CACNG3O60359 315 aa13.1□□□□□ -0.31
COL6A1-205ENST00000492851 GREM1O60565 184 aa13.1□□□□□ -0.31
COL6A1-205ENST00000492851 TYRP14679 529 aa13.1□□□□□ -0.31
COL6A1-205ENST00000492851 P2RY2P41231 377 aa13.1□□□□□ -0.31
COL6A1-205ENST00000492851 PRCPP42785 496 aa13.1□□□□□ -0.31
COL6A1-205ENST00000492851 ZNF132P52740 706 aa13.1□□□□□ -0.31
COL6A1-205ENST00000492851 CETN1Q12798 172 aa13.1□□□□□ -0.31
COL6A1-205ENST00000492851 PNOCQ13519 176 aa13.1□□□□□ -0.31
COL6A1-205ENST00000492851 CCDC6Q16204 474 aa13.1□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 28.5 ms