RNA–Protein interactions for RNA: ENST00000492556.5

CHKB-CPT1B-203, Transcript of CHKB-CPT1B readthrough (NMD candidate), humanhuman

TSL 2

Gene CHKB-CPT1B, Length 4,906 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHKB-CPT1B-203ENST00000492556 SIX2Q9NPC8 291 aa21.76■■□□□ 1.07
CHKB-CPT1B-203ENST00000492556 SNHG28P0DPA3 235 aa21.76■■□□□ 1.07
CHKB-CPT1B-203ENST00000492556 TFE3P19532 575 aaPredicted RBP21.76■■□□□ 1.07
CHKB-CPT1B-203ENST00000492556 CHN2P52757 468 aa21.76■■□□□ 1.07
CHKB-CPT1B-203ENST00000492556 Q3C1V9 767 aa21.76■■□□□ 1.07
CHKB-CPT1B-203ENST00000492556 CCDC153Q494R4 210 aa21.76■■□□□ 1.07
CHKB-CPT1B-203ENST00000492556 DHDDSQ86SQ9 333 aa21.76■■□□□ 1.07
CHKB-CPT1B-203ENST00000492556 MAB21L3Q8N8X9 362 aa21.76■■□□□ 1.07
CHKB-CPT1B-203ENST00000492556 ZNF555Q8NEP9 628 aa21.76■■□□□ 1.07
CHKB-CPT1B-203ENST00000492556 OR6Y1Q8NGX8 325 aa21.76■■□□□ 1.07
CHKB-CPT1B-203ENST00000492556 R3HDM2Q9Y2K5 976 aaKnown RBP21.76■■□□□ 1.07
CHKB-CPT1B-203ENST00000492556 LBRQ14739 615 aaKnown RBP21.76■■□□□ 1.07
CHKB-CPT1B-203ENST00000492556 PHF13Q86YI8 300 aaPredicted RBP21.76■■□□□ 1.07
CHKB-CPT1B-203ENST00000492556 CLEC4FQ8N1N0 589 aa21.76■■□□□ 1.07
CHKB-CPT1B-203ENST00000492556 USP33Q8TEY7 942 aa21.76■■□□□ 1.07
CHKB-CPT1B-203ENST00000492556 PXMP2Q9NR77 195 aa21.76■■□□□ 1.07
CHKB-CPT1B-203ENST00000492556 CAMSAP3Q9P1Y5 1249 aaPredicted RBP21.76■■□□□ 1.07
CHKB-CPT1B-203ENST00000492556 FOXO6A8MYZ6 492 aa21.76■■□□□ 1.07
CHKB-CPT1B-203ENST00000492556 MAN1A2O60476 641 aa21.76■■□□□ 1.07
CHKB-CPT1B-203ENST00000492556 RAP1GAPP47736 663 aa21.76■■□□□ 1.07
CHKB-CPT1B-203ENST00000492556 DCAF6Q58WW2 860 aa21.76■■□□□ 1.07
CHKB-CPT1B-203ENST00000492556 C12orf56Q8IXR9 622 aa21.76■■□□□ 1.07
CHKB-CPT1B-203ENST00000492556 PIWIL2Q8TC59 973 aaKnown RBP21.76■■□□□ 1.07
CHKB-CPT1B-203ENST00000492556 GCNAQ96QF7 691 aa21.76■■□□□ 1.07
CHKB-CPT1B-203ENST00000492556 DENND2DQ9H6A0 471 aaPredicted RBP21.76■■□□□ 1.07
CHKB-CPT1B-203ENST00000492556 H0YGN5 161 aa21.75■■□□□ 1.07
CHKB-CPT1B-203ENST00000492556 GAS2O43903 313 aaKnown RBP21.75■■□□□ 1.07
CHKB-CPT1B-203ENST00000492556 CDR2LQ86X02 465 aaPredicted RBP21.75■■□□□ 1.07
CHKB-CPT1B-203ENST00000492556 SHISA4Q96DD7 197 aa21.75■■□□□ 1.07
CHKB-CPT1B-203ENST00000492556 KREMEN1Q96MU8 473 aa21.75■■□□□ 1.07
CHKB-CPT1B-203ENST00000492556 SMARCAD1Q9H4L7 1026 aa21.75■■□□□ 1.07
CHKB-CPT1B-203ENST00000492556 NFS1Q9Y697 457 aa21.75■■□□□ 1.07
CHKB-CPT1B-203ENST00000492556 PPIDQ08752 370 aaKnown RBP21.75■■□□□ 1.07
CHKB-CPT1B-203ENST00000492556 AASDHQ4L235 1098 aaPredicted RBP21.75■■□□□ 1.07
CHKB-CPT1B-203ENST00000492556 LPCAT2Q7L5N7 544 aa21.75■■□□□ 1.07
CHKB-CPT1B-203ENST00000492556 CCDC33Q8N5R6 958 aa21.75■■□□□ 1.07
CHKB-CPT1B-203ENST00000492556 SGF29Q96ES7 293 aa21.75■■□□□ 1.07
CHKB-CPT1B-203ENST00000492556 TMEM176AQ96HP8 235 aa21.75■■□□□ 1.07
CHKB-CPT1B-203ENST00000492556 DDX50Q9BQ39 737 aaKnown RBP21.75■■□□□ 1.07
CHKB-CPT1B-203ENST00000492556 BEGAINQ9BUH8 593 aa21.75■■□□□ 1.07
CHKB-CPT1B-203ENST00000492556 DCXO43602 365 aa21.75■■□□□ 1.07
CHKB-CPT1B-203ENST00000492556 SLC25A3Q00325 362 aa21.75■■□□□ 1.07
CHKB-CPT1B-203ENST00000492556 PGM5Q15124 567 aa21.75■■□□□ 1.07
CHKB-CPT1B-203ENST00000492556 SLC1A5Q15758 541 aa21.75■■□□□ 1.07
CHKB-CPT1B-203ENST00000492556 APOBEC3HQ6NTF7 200 aaKnown RBP21.75■■□□□ 1.07
CHKB-CPT1B-203ENST00000492556 B3GNT6Q6ZMB0 384 aa21.75■■□□□ 1.07
CHKB-CPT1B-203ENST00000492556 KDELC2Q7Z4H8 507 aa21.75■■□□□ 1.07
CHKB-CPT1B-203ENST00000492556 ASAP3Q8TDY4 903 aa21.75■■□□□ 1.07
CHKB-CPT1B-203ENST00000492556 EBF2Q9HAK2 575 aa21.75■■□□□ 1.07
CHKB-CPT1B-203ENST00000492556 IL1RL2Q9HB29 575 aa21.75■■□□□ 1.07
CHKB-CPT1B-203ENST00000492556 FASTKD2Q9NYY8 710 aaKnown RBP eCLIP21.75■■□□□ 1.07
CHKB-CPT1B-203ENST00000492556 CHADO15335 359 aa21.75■■□□□ 1.07
CHKB-CPT1B-203ENST00000492556 MIPP30301 263 aa21.75■■□□□ 1.07
CHKB-CPT1B-203ENST00000492556 PSMD7P51665 324 aa21.75■■□□□ 1.07
CHKB-CPT1B-203ENST00000492556 MPZL3Q6UWV2 235 aa21.75■■□□□ 1.07
CHKB-CPT1B-203ENST00000492556 RFWD2Q8NHY2 731 aa21.75■■□□□ 1.07
CHKB-CPT1B-203ENST00000492556 USP13Q92995 863 aaPredicted RBP21.75■■□□□ 1.07
CHKB-CPT1B-203ENST00000492556 PHACTR1Q9C0D0 580 aa21.75■■□□□ 1.07
CHKB-CPT1B-203ENST00000492556 hCG_1818297A0A087WSY0 165 aa21.74■■□□□ 1.07
CHKB-CPT1B-203ENST00000492556 SMIM31A0A1B0GVY4 71 aa21.74■■□□□ 1.07
CHKB-CPT1B-203ENST00000492556 PSMA4P25789 261 aaKnown RBP21.74■■□□□ 1.07
CHKB-CPT1B-203ENST00000492556 NUP107P57740 925 aa21.74■■□□□ 1.07
CHKB-CPT1B-203ENST00000492556 ACAP1Q15027 740 aa21.74■■□□□ 1.07
CHKB-CPT1B-203ENST00000492556 ULK2Q8IYT8 1036 aa21.74■■□□□ 1.07
CHKB-CPT1B-203ENST00000492556 APPL2Q8NEU8 664 aa21.74■■□□□ 1.07
CHKB-CPT1B-203ENST00000492556 GORASP1Q9BQQ3 440 aa21.74■■□□□ 1.07
CHKB-CPT1B-203ENST00000492556 ZNF229Q9UJW7 825 aa21.74■■□□□ 1.07
CHKB-CPT1B-203ENST00000492556 RUVBL2Q9Y230 463 aaKnown RBP21.74■■□□□ 1.07
CHKB-CPT1B-203ENST00000492556 CREB1P16220 341 aa21.74■■□□□ 1.07
CHKB-CPT1B-203ENST00000492556 INPP1P49441 399 aa21.74■■□□□ 1.07
CHKB-CPT1B-203ENST00000492556 VPS72Q15906 364 aa21.74■■□□□ 1.07
CHKB-CPT1B-203ENST00000492556 ZSWIM2Q8NEG5 633 aa21.74■■□□□ 1.07
CHKB-CPT1B-203ENST00000492556 WNK4Q96J92 1243 aa21.74■■□□□ 1.07
CHKB-CPT1B-203ENST00000492556 BCL9LQ86UU0 1499 aa21.74■■□□□ 1.07
CHKB-CPT1B-203ENST00000492556 NOMO3P69849 1222 aa21.74■■□□□ 1.07
CHKB-CPT1B-203ENST00000492556 ZNF280CQ8ND82 737 aa21.74■■□□□ 1.07
CHKB-CPT1B-203ENST00000492556 CALML6Q8TD86 181 aa21.74■■□□□ 1.07
CHKB-CPT1B-203ENST00000492556 BTBD7Q9P203 1132 aa21.74■■□□□ 1.07
CHKB-CPT1B-203ENST00000492556 KIF1AQ12756 1690 aa21.74■■□□□ 1.07
CHKB-CPT1B-203ENST00000492556 GP5P40197 560 aa21.74■■□□□ 1.07
CHKB-CPT1B-203ENST00000492556 FAM83EQ2M2I3 478 aa21.74■■□□□ 1.07
CHKB-CPT1B-203ENST00000492556 CWF19L1Q69YN2 538 aaKnown RBP21.74■■□□□ 1.07
CHKB-CPT1B-203ENST00000492556 ZBTB49Q6ZSB9 765 aa21.74■■□□□ 1.07
CHKB-CPT1B-203ENST00000492556 SPOCK2Q92563 424 aa21.74■■□□□ 1.07
CHKB-CPT1B-203ENST00000492556 FAM193BQ96PV7 902 aaPredicted RBP21.74■■□□□ 1.07
CHKB-CPT1B-203ENST00000492556 TBCBQ99426 244 aa21.74■■□□□ 1.07
CHKB-CPT1B-203ENST00000492556 TMEM79Q9BSE2 394 aa21.74■■□□□ 1.07
CHKB-CPT1B-203ENST00000492556 SLC17A7Q9P2U7 560 aa21.74■■□□□ 1.07
CHKB-CPT1B-203ENST00000492556 A0A0B4J269 797 aa21.73■■□□□ 1.07
CHKB-CPT1B-203ENST00000492556 CYP2F1P24903 491 aa21.73■■□□□ 1.07
CHKB-CPT1B-203ENST00000492556 CYP1B1Q16678 543 aa21.73■■□□□ 1.07
CHKB-CPT1B-203ENST00000492556 AAGABQ6PD74 315 aa21.73■■□□□ 1.07
CHKB-CPT1B-203ENST00000492556 AP4E1Q9UPM8 1137 aa21.73■■□□□ 1.07
CHKB-CPT1B-203ENST00000492556 TPST1O60507 370 aa21.73■■□□□ 1.07
CHKB-CPT1B-203ENST00000492556 NCKAP1LP55160 1127 aa21.73■■□□□ 1.07
CHKB-CPT1B-203ENST00000492556 LINC00523Q86TU6 105 aa21.73■■□□□ 1.07
CHKB-CPT1B-203ENST00000492556 SERBP1Q8NC51 408 aaKnown RBP eCLIP21.73■■□□□ 1.07
CHKB-CPT1B-203ENST00000492556 TMEM161BQ8NDZ6 487 aa21.73■■□□□ 1.07
CHKB-CPT1B-203ENST00000492556 IDI2Q9BXS1 227 aa21.73■■□□□ 1.07
CHKB-CPT1B-203ENST00000492556 CYP3A43Q9HB55 503 aa21.73■■□□□ 1.07
Retrieved 100 of 20,778 RNA–protein pairs in 26.1 ms