RNA–Protein interactions for RNA: ENST00000492280.5

HMGN1-220, Transcript of high mobility group nucleosome binding domain 1, humanhuman

TSL 5

Gene HMGN1, Length 2,707 nt, Biotype retained intron, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGN1-220ENST00000492280 KCNJ11Q14654 390 aa12.96□□□□□ -0.34
HMGN1-220ENST00000492280 BSPRYQ5W0U4 402 aa12.96□□□□□ -0.34
HMGN1-220ENST00000492280 LRRC8CQ8TDW0 803 aa12.96□□□□□ -0.34
HMGN1-220ENST00000492280 ZFP42Q96MM3 310 aa12.96□□□□□ -0.34
HMGN1-220ENST00000492280 LBHD1Q9BQE6 289 aaPredicted RBP12.96□□□□□ -0.34
HMGN1-220ENST00000492280 TINF2Q9BSI4 451 aa12.96□□□□□ -0.34
HMGN1-220ENST00000492280 ADAMTS10Q9H324 1103 aa12.96□□□□□ -0.34
HMGN1-220ENST00000492280 VRTNQ9H8Y1 702 aa12.96□□□□□ -0.34
HMGN1-220ENST00000492280 FLRT1Q9NZU1 646 aa12.96□□□□□ -0.34
HMGN1-220ENST00000492280 HESX1Q9UBX0 185 aa12.96□□□□□ -0.34
HMGN1-220ENST00000492280 PRKAG3Q9UGI9 489 aa12.96□□□□□ -0.34
HMGN1-220ENST00000492280 EPB41L3Q9Y2J2 1087 aaPredicted RBP12.96□□□□□ -0.34
HMGN1-220ENST00000492280 APOL1O14791 398 aa12.95□□□□□ -0.34
HMGN1-220ENST00000492280 CBX6O95503 412 aa12.95□□□□□ -0.34
HMGN1-220ENST00000492280 METTL18O95568 372 aa12.95□□□□□ -0.34
HMGN1-220ENST00000492280 CYP2F1P24903 491 aa12.95□□□□□ -0.34
HMGN1-220ENST00000492280 YY1P25490 414 aa12.95□□□□□ -0.34
HMGN1-220ENST00000492280 PCK1P35558 622 aa12.95□□□□□ -0.34
HMGN1-220ENST00000492280 GTF2A1P52655 376 aaPredicted RBP12.95□□□□□ -0.34
HMGN1-220ENST00000492280 YWHAZP63104 245 aaKnown RBP12.95□□□□□ -0.34
HMGN1-220ENST00000492280 SNCBQ16143 134 aa12.95□□□□□ -0.34
HMGN1-220ENST00000492280 DUSP28Q4G0W2 176 aa12.95□□□□□ -0.34
HMGN1-220ENST00000492280 OTOAQ7RTW8 1153 aa12.95□□□□□ -0.34
HMGN1-220ENST00000492280 IFNLR1Q8IU57 520 aaPredicted RBP12.95□□□□□ -0.34
HMGN1-220ENST00000492280 ARRDC4Q8NCT1 418 aa12.95□□□□□ -0.34
HMGN1-220ENST00000492280 ADAM32Q8TC27 787 aa12.95□□□□□ -0.34
HMGN1-220ENST00000492280 MZB1Q8WU39 189 aa12.95□□□□□ -0.34
HMGN1-220ENST00000492280 ZC3H15Q8WU90 426 aaKnown RBP12.95□□□□□ -0.34
HMGN1-220ENST00000492280 KBTBD7Q8WVZ9 684 aa12.95□□□□□ -0.34
HMGN1-220ENST00000492280 TTC17Q96AE7 1141 aa12.95□□□□□ -0.34
HMGN1-220ENST00000492280 KLHL29Q96CT2 875 aa12.95□□□□□ -0.34
HMGN1-220ENST00000492280 FAM111AQ96PZ2 611 aa12.95□□□□□ -0.34
HMGN1-220ENST00000492280 MECRQ9BV79 373 aa12.95□□□□□ -0.34
HMGN1-220ENST00000492280 CHKBQ9Y259 395 aa12.95□□□□□ -0.34
HMGN1-220ENST00000492280 CCDC195A0A1B0GUA6 201 aa12.95□□□□□ -0.34
HMGN1-220ENST00000492280 GPR32O75388 356 aa12.95□□□□□ -0.34
HMGN1-220ENST00000492280 BEST1O76090 585 aa12.95□□□□□ -0.34
HMGN1-220ENST00000492280 AMPD1P23109 780 aa12.95□□□□□ -0.34
HMGN1-220ENST00000492280 GMPRP36959 345 aa12.95□□□□□ -0.34
HMGN1-220ENST00000492280 SLC6A3Q01959 620 aa12.95□□□□□ -0.34
HMGN1-220ENST00000492280 DGKDQ16760 1214 aa12.95□□□□□ -0.34
HMGN1-220ENST00000492280 PKDCCQ504Y2 493 aa12.95□□□□□ -0.34
HMGN1-220ENST00000492280 PLEKHG4Q58EX7 1191 aa12.95□□□□□ -0.34
HMGN1-220ENST00000492280 SLC27A1Q6PCB7 646 aa12.95□□□□□ -0.34
HMGN1-220ENST00000492280 TRMT10BQ6PF06 316 aaKnown RBP12.95□□□□□ -0.34
HMGN1-220ENST00000492280 CDHR3Q6ZTQ4 885 aa12.95□□□□□ -0.34
HMGN1-220ENST00000492280 SHCBP1Q8NEM2 672 aa12.95□□□□□ -0.34
HMGN1-220ENST00000492280 SLC35F5Q8WV83 523 aa12.95□□□□□ -0.34
HMGN1-220ENST00000492280 PRR11Q96HE9 360 aaPredicted RBP12.95□□□□□ -0.34
HMGN1-220ENST00000492280 FOXP3Q9BZS1 431 aa12.95□□□□□ -0.34
HMGN1-220ENST00000492280 PLAC1Q9HBJ0 212 aa12.95□□□□□ -0.34
HMGN1-220ENST00000492280 ETNK1Q9HBU6 452 aa12.95□□□□□ -0.34
HMGN1-220ENST00000492280 SMYD2Q9NRG4 433 aa12.95□□□□□ -0.34
HMGN1-220ENST00000492280 TIMM13Q9Y5L4 95 aaPredicted RBP12.95□□□□□ -0.34
HMGN1-220ENST00000492280 MAD1L1Q9Y6D9 718 aa12.95□□□□□ -0.34
HMGN1-220ENST00000492280 PYGBP11216 843 aa12.94□□□□□ -0.34
HMGN1-220ENST00000492280 GOT1P17174 413 aa12.94□□□□□ -0.34
HMGN1-220ENST00000492280 NDUFV1P49821 464 aa12.94□□□□□ -0.34
HMGN1-220ENST00000492280 GSCP56915 257 aaPredicted RBP12.94□□□□□ -0.34
HMGN1-220ENST00000492280 GPR162Q16538 588 aa12.94□□□□□ -0.34
HMGN1-220ENST00000492280 C9orf57Q5W0N0 161 aa12.94□□□□□ -0.34
HMGN1-220ENST00000492280 OLFML2BQ68BL8 750 aa12.94□□□□□ -0.34
HMGN1-220ENST00000492280 LRRC6Q86X45 466 aa12.94□□□□□ -0.34
HMGN1-220ENST00000492280 RIBC1Q8N443 379 aaPredicted RBP12.94□□□□□ -0.34
HMGN1-220ENST00000492280 TBCBQ99426 244 aa12.94□□□□□ -0.34
HMGN1-220ENST00000492280 ZMYND8Q9ULU4 1186 aaPredicted RBP12.94□□□□□ -0.34
HMGN1-220ENST00000492280 MAGED2Q9UNF1 606 aaPredicted RBP12.94□□□□□ -0.34
HMGN1-220ENST00000492280 ACTL7BQ9Y614 415 aa12.94□□□□□ -0.34
HMGN1-220ENST00000492280 E2F8A0AVK6 867 aa12.94□□□□□ -0.34
HMGN1-220ENST00000492280 E7ESA3 106 aa12.94□□□□□ -0.34
HMGN1-220ENST00000492280 PRPF4O43172 522 aaKnown RBP eCLIP12.94□□□□□ -0.34
HMGN1-220ENST00000492280 ENDOD1O94919 500 aa12.94□□□□□ -0.34
HMGN1-220ENST00000492280 PHBP35232 272 aa12.94□□□□□ -0.34
HMGN1-220ENST00000492280 IRX4P78413 519 aa12.94□□□□□ -0.34
HMGN1-220ENST00000492280 SEPT7Q16181 437 aaKnown RBP12.94□□□□□ -0.34
HMGN1-220ENST00000492280 TDRPQ86YL5 185 aa12.94□□□□□ -0.34
HMGN1-220ENST00000492280 SUGP1Q8IWZ8 645 aaKnown RBP12.94□□□□□ -0.34
HMGN1-220ENST00000492280 ZC3H8Q8N5P1 291 aaKnown RBP eCLIP12.94□□□□□ -0.34
HMGN1-220ENST00000492280 RFWD2Q8NHY2 731 aa12.94□□□□□ -0.34
HMGN1-220ENST00000492280 ZNF75CPQ92670 426 aaPredicted RBP12.94□□□□□ -0.34
HMGN1-220ENST00000492280 KCTD15Q96SI1 283 aaPredicted RBP12.94□□□□□ -0.34
HMGN1-220ENST00000492280 LGMNQ99538 433 aa12.94□□□□□ -0.34
HMGN1-220ENST00000492280 HAO1Q9UJM8 370 aa12.94□□□□□ -0.34
HMGN1-220ENST00000492280 ATP6V1G2O95670 118 aa12.93□□□□□ -0.34
HMGN1-220ENST00000492280 ADIGQ0VDE8 80 aa12.93□□□□□ -0.34
HMGN1-220ENST00000492280 BNIP1Q12981 228 aa12.93□□□□□ -0.34
HMGN1-220ENST00000492280 PDK4Q16654 411 aa12.93□□□□□ -0.34
HMGN1-220ENST00000492280 GALNTL6Q49A17 601 aa12.93□□□□□ -0.34
HMGN1-220ENST00000492280 ADGRD1Q6QNK2 874 aa12.93□□□□□ -0.34
HMGN1-220ENST00000492280 DENND5BQ6ZUT9 1274 aa12.93□□□□□ -0.34
HMGN1-220ENST00000492280 PCGF5Q86SE9 256 aa12.93□□□□□ -0.34
HMGN1-220ENST00000492280 CAND1Q86VP6 1230 aaKnown RBP12.93□□□□□ -0.34
HMGN1-220ENST00000492280 ZNF395Q9H8N7 513 aaPredicted RBP12.93□□□□□ -0.34
HMGN1-220ENST00000492280 NOD2Q9HC29 1040 aa12.93□□□□□ -0.34
HMGN1-220ENST00000492280 AP4E1Q9UPM8 1137 aa12.93□□□□□ -0.34
HMGN1-220ENST00000492280 EFR3BQ9Y2G0 817 aa12.93□□□□□ -0.34
HMGN1-220ENST00000492280 TEX264Q9Y6I9 313 aa12.93□□□□□ -0.34
HMGN1-220ENST00000492280 TTC3P53804 2025 aa12.93□□□□□ -0.34
HMGN1-220ENST00000492280 A0A0G2JND7 137 aa12.93□□□□□ -0.34
HMGN1-220ENST00000492280 SMIM28A0A1B0GU29 152 aa12.93□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 26.9 ms