RNA–Protein interactions for RNA: ENST00000492185.5

NELFE-211, Transcript of negative elongation factor complex member E, humanhuman

TSL 2

Gene NELFE, Length 1,786 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NELFE-211ENST00000492185 TRBV21OR9-2A0A075B6F4 123 aaPredicted RBP20.8■□□□□ 0.92
NELFE-211ENST00000492185 HHLA1C9JL84 531 aa20.8■□□□□ 0.92
NELFE-211ENST00000492185 ABHD2P08910 425 aa20.8■□□□□ 0.92
NELFE-211ENST00000492185 NOS2P35228 1153 aa20.8■□□□□ 0.92
NELFE-211ENST00000492185 RPL22P35268 128 aaKnown RBP20.8■□□□□ 0.92
NELFE-211ENST00000492185 YWHAZP63104 245 aaKnown RBP20.8■□□□□ 0.92
NELFE-211ENST00000492185 DNAJC21Q5F1R6 531 aaKnown RBP20.8■□□□□ 0.92
NELFE-211ENST00000492185 PCGF5Q86SE9 256 aa20.8■□□□□ 0.92
NELFE-211ENST00000492185 DEFB106AQ8N104 65 aa20.8■□□□□ 0.92
NELFE-211ENST00000492185 RNF169Q8NCN4 708 aa20.8■□□□□ 0.92
NELFE-211ENST00000492185 LINC01599Q8WXQ3 324 aa20.8■□□□□ 0.92
NELFE-211ENST00000492185 RTP4Q96DX8 246 aa20.8■□□□□ 0.92
NELFE-211ENST00000492185 ACBD6Q9BR61 282 aa20.8■□□□□ 0.92
NELFE-211ENST00000492185 CENPHQ9H3R5 247 aa20.8■□□□□ 0.92
NELFE-211ENST00000492185 LRRC4Q9HBW1 653 aa20.8■□□□□ 0.92
NELFE-211ENST00000492185 CSNK1G1Q9HCP0 422 aa20.8■□□□□ 0.92
NELFE-211ENST00000492185 TMEM30AQ9NV96 361 aa20.8■□□□□ 0.92
NELFE-211ENST00000492185 CALCOCO1Q9P1Z2 691 aa20.8■□□□□ 0.92
NELFE-211ENST00000492185 DSEQ9UL01 958 aa20.8■□□□□ 0.92
NELFE-211ENST00000492185 NOVA2Q9UNW9 492 aaKnown RBP20.8■□□□□ 0.92
NELFE-211ENST00000492185 PHF24Q9UPV7 400 aa20.8■□□□□ 0.92
NELFE-211ENST00000492185 AP1G2O75843 785 aa20.8■□□□□ 0.92
NELFE-211ENST00000492185 EOMESO95936 686 aa20.8■□□□□ 0.92
NELFE-211ENST00000492185 STIP1P31948 543 aaKnown RBP20.8■□□□□ 0.92
NELFE-211ENST00000492185 PRMT2P55345 433 aa20.8■□□□□ 0.92
NELFE-211ENST00000492185 NPNTQ6UXI9 565 aa20.8■□□□□ 0.92
NELFE-211ENST00000492185 RSAD2Q8WXG1 361 aa20.8■□□□□ 0.92
NELFE-211ENST00000492185 P3H4Q92791 437 aa20.8■□□□□ 0.92
NELFE-211ENST00000492185 SUSD3Q96L08 255 aa20.8■□□□□ 0.92
NELFE-211ENST00000492185 RBM15Q96T37 977 aaKnown RBP eCLIP20.8■□□□□ 0.92
NELFE-211ENST00000492185 HMX1Q9NP08 348 aaPredicted RBP20.8■□□□□ 0.92
NELFE-211ENST00000492185 CENPFP49454 3210 aa20.79■□□□□ 0.92
NELFE-211ENST00000492185 DCDC2CA8MYV0 355 aa20.79■□□□□ 0.92
NELFE-211ENST00000492185 SMAPO00193 183 aa20.79■□□□□ 0.92
NELFE-211ENST00000492185 APOL1O14791 398 aa20.79■□□□□ 0.92
NELFE-211ENST00000492185 B3GAT3O94766 335 aa20.79■□□□□ 0.92
NELFE-211ENST00000492185 IFNB1P01574 187 aa20.79■□□□□ 0.92
NELFE-211ENST00000492185 NDUFV1P49821 464 aa20.79■□□□□ 0.92
NELFE-211ENST00000492185 ATXN1P54253 815 aaKnown RBP20.79■□□□□ 0.92
NELFE-211ENST00000492185 MAP3K7CLP57077 242 aa20.79■□□□□ 0.92
NELFE-211ENST00000492185 DAOAP59103 153 aa20.79■□□□□ 0.92
NELFE-211ENST00000492185 MAGOHP61326 146 aaKnown RBP20.79■□□□□ 0.92
NELFE-211ENST00000492185 ROR1Q01973 937 aa20.79■□□□□ 0.92
NELFE-211ENST00000492185 CBLBQ13191 982 aa20.79■□□□□ 0.92
NELFE-211ENST00000492185 KYNUQ16719 465 aa20.79■□□□□ 0.92
NELFE-211ENST00000492185 DCLRE1AQ6PJP8 1040 aa20.79■□□□□ 0.92
NELFE-211ENST00000492185 LRRC31Q6UY01 552 aa20.79■□□□□ 0.92
NELFE-211ENST00000492185 RSPH1Q8WYR4 309 aa20.79■□□□□ 0.92
NELFE-211ENST00000492185 NDRG1Q92597 394 aaKnown RBP20.79■□□□□ 0.92
NELFE-211ENST00000492185 NRDE2Q9H7Z3 1164 aa20.79■□□□□ 0.92
NELFE-211ENST00000492185 C10orf88Q9H8K7 445 aa20.79■□□□□ 0.92
NELFE-211ENST00000492185 USP29Q9HBJ7 922 aa20.79■□□□□ 0.92
NELFE-211ENST00000492185 CNGB3Q9NQW8 809 aa20.79■□□□□ 0.92
NELFE-211ENST00000492185 RCOR3Q9P2K3 495 aaPredicted RBP20.79■□□□□ 0.92
NELFE-211ENST00000492185 AP4E1Q9UPM8 1137 aa20.79■□□□□ 0.92
NELFE-211ENST00000492185 USP3Q9Y6I4 520 aa20.79■□□□□ 0.92
NELFE-211ENST00000492185 SRRM3A6NNA2 597 aaPredicted RBP20.78■□□□□ 0.92
NELFE-211ENST00000492185 RASGRF2O14827 1237 aa20.78■□□□□ 0.92
NELFE-211ENST00000492185 EIF3HO15372 352 aaKnown RBP eCLIP20.78■□□□□ 0.92
NELFE-211ENST00000492185 ACSL3O95573 720 aa20.78■□□□□ 0.92
NELFE-211ENST00000492185 AGTP01019 485 aa20.78■□□□□ 0.92
NELFE-211ENST00000492185 TYMPP19971 482 aa20.78■□□□□ 0.92
NELFE-211ENST00000492185 MAGEA4P43358 317 aa20.78■□□□□ 0.92
NELFE-211ENST00000492185 ATP1A2P50993 1020 aa20.78■□□□□ 0.92
NELFE-211ENST00000492185 TKTL1P51854 596 aa20.78■□□□□ 0.92
NELFE-211ENST00000492185 CACNA2D1P54289 1103 aa20.78■□□□□ 0.92
NELFE-211ENST00000492185 PPP2R2AP63151 447 aa20.78■□□□□ 0.92
NELFE-211ENST00000492185 DSC1Q08554 894 aa20.78■□□□□ 0.92
NELFE-211ENST00000492185 AUHQ13825 339 aaKnown RBP20.78■□□□□ 0.92
NELFE-211ENST00000492185 INTS6LQ5JSJ4 861 aaKnown RBP20.78■□□□□ 0.92
NELFE-211ENST00000492185 SLC24A5Q71RS6 500 aa20.78■□□□□ 0.92
NELFE-211ENST00000492185 PPIL6Q8IXY8 311 aa20.78■□□□□ 0.92
NELFE-211ENST00000492185 SIX6OS1Q8N1H7 587 aa20.78■□□□□ 0.92
NELFE-211ENST00000492185 CCDC185Q8N715 623 aa20.78■□□□□ 0.92
NELFE-211ENST00000492185 NAT8LQ8N9F0 302 aa20.78■□□□□ 0.92
NELFE-211ENST00000492185 TRAF3IP1Q8TDR0 691 aaPredicted RBP20.78■□□□□ 0.92
NELFE-211ENST00000492185 CPT1BQ92523 772 aa20.78■□□□□ 0.92
NELFE-211ENST00000492185 SMARCD1Q96GM5 515 aa20.78■□□□□ 0.92
NELFE-211ENST00000492185 SERPINB12Q96P63 405 aa20.78■□□□□ 0.92
NELFE-211ENST00000492185 KCTD15Q96SI1 283 aaPredicted RBP20.78■□□□□ 0.92
NELFE-211ENST00000492185 PRDM16Q9HAZ2 1276 aa20.78■□□□□ 0.92
NELFE-211ENST00000492185 DNAJC17Q9NVM6 304 aaKnown RBP20.78■□□□□ 0.92
NELFE-211ENST00000492185 FZD10Q9ULW2 581 aa20.78■□□□□ 0.92
NELFE-211ENST00000492185 BCLAF3A2AJT9 711 aaKnown RBP20.77■□□□□ 0.92
NELFE-211ENST00000492185 CFAP69A5D8W1 941 aa20.77■□□□□ 0.92
NELFE-211ENST00000492185 ARVCFO00192 962 aa20.77■□□□□ 0.92
NELFE-211ENST00000492185 NRP1O14786 923 aa20.77■□□□□ 0.92
NELFE-211ENST00000492185 ALOX15BO15296 676 aa20.77■□□□□ 0.92
NELFE-211ENST00000492185 FYNP06241 537 aa20.77■□□□□ 0.92
NELFE-211ENST00000492185 CYP2F1P24903 491 aa20.77■□□□□ 0.92
NELFE-211ENST00000492185 MDH1P40925 334 aaKnown RBP20.77■□□□□ 0.92
NELFE-211ENST00000492185 BRCC3P46736 316 aa20.77■□□□□ 0.92
NELFE-211ENST00000492185 BCAR1P56945 870 aa20.77■□□□□ 0.92
NELFE-211ENST00000492185 GNGT1P63211 74 aa20.77■□□□□ 0.92
NELFE-211ENST00000492185 BHLHA9Q7RTU4 235 aa20.77■□□□□ 0.92
NELFE-211ENST00000492185 METTL23Q86XA0 190 aa20.77■□□□□ 0.92
NELFE-211ENST00000492185 SCML4Q8N228 414 aa20.77■□□□□ 0.92
NELFE-211ENST00000492185 FAM71DQ8N9W8 422 aa20.77■□□□□ 0.92
NELFE-211ENST00000492185 EPS8L3Q8TE67 593 aaKnown RBP20.77■□□□□ 0.92
NELFE-211ENST00000492185 ULBP1Q9BZM6 244 aa20.77■□□□□ 0.92
Retrieved 100 of 20,778 RNA–protein pairs in 33.3 ms