RNA–Protein interactions for RNA: ENST00000491802.1

CPNE9-204, Transcript of copine family member 9, humanhuman

TSL 4

Gene CPNE9, Length 584 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE9-204ENST00000491802 GABBR2O75899 941 aa24.41■■□□□ 1.5
CPNE9-204ENST00000491802 TBX18O95935 607 aa24.41■■□□□ 1.5
CPNE9-204ENST00000491802 RALAP11233 206 aa24.41■■□□□ 1.5
CPNE9-204ENST00000491802 ARSAP15289 507 aa24.41■■□□□ 1.5
CPNE9-204ENST00000491802 IFNAR2P48551 515 aa24.41■■□□□ 1.5
CPNE9-204ENST00000491802 KPNA1P52294 538 aaPredicted RBP24.41■■□□□ 1.5
CPNE9-204ENST00000491802 BPIFB4P59827 614 aa24.41■■□□□ 1.5
CPNE9-204ENST00000491802 PDGFRLQ15198 375 aa24.41■■□□□ 1.5
CPNE9-204ENST00000491802 FILIP1LQ4L180 1135 aa24.41■■□□□ 1.5
CPNE9-204ENST00000491802 C10orf120Q5SQS8 335 aa24.41■■□□□ 1.5
CPNE9-204ENST00000491802 TADA2BQ86TJ2 420 aa24.41■■□□□ 1.5
CPNE9-204ENST00000491802 PASD1Q8IV76 773 aa24.41■■□□□ 1.5
CPNE9-204ENST00000491802 OSCP1Q8WVF1 389 aa24.41■■□□□ 1.5
CPNE9-204ENST00000491802 FOXQ1Q9C009 403 aa24.41■■□□□ 1.5
CPNE9-204ENST00000491802 EBF3Q9H4W6 596 aa24.41■■□□□ 1.5
CPNE9-204ENST00000491802 LTB4R2Q9NPC1 389 aa24.41■■□□□ 1.5
CPNE9-204ENST00000491802 NLRC4Q9NPP4 1024 aa24.41■■□□□ 1.5
CPNE9-204ENST00000491802 HPS4Q9NQG7 708 aa24.41■■□□□ 1.5
CPNE9-204ENST00000491802 ST7Q9NRC1 585 aa24.41■■□□□ 1.5
CPNE9-204ENST00000491802 DUS2Q9NX74 493 aaKnown RBP24.41■■□□□ 1.5
CPNE9-204ENST00000491802 WDFY4Q6ZS81 3184 aa24.41■■□□□ 1.5
CPNE9-204ENST00000491802 GOLGA6L19H0YKK7 550 aa24.4■■□□□ 1.5
CPNE9-204ENST00000491802 SCAMP3O14828 347 aaKnown RBP24.4■■□□□ 1.5
CPNE9-204ENST00000491802 MDM4O15151 490 aa24.4■■□□□ 1.5
CPNE9-204ENST00000491802 TEX33O43247 280 aa24.4■■□□□ 1.5
CPNE9-204ENST00000491802 GALR2O43603 387 aaPredicted RBP24.4■■□□□ 1.5
CPNE9-204ENST00000491802 CD72P21854 359 aa24.4■■□□□ 1.5
CPNE9-204ENST00000491802 ATP5C1P36542 298 aaKnown RBP24.4■■□□□ 1.5
CPNE9-204ENST00000491802 MAGEA9P43362 315 aa24.4■■□□□ 1.5
CPNE9-204ENST00000491802 SOX9P48436 509 aa24.4■■□□□ 1.5
CPNE9-204ENST00000491802 DAOAP59103 153 aa24.4■■□□□ 1.5
CPNE9-204ENST00000491802 CCDC105Q8IYK2 499 aa24.4■■□□□ 1.5
CPNE9-204ENST00000491802 ZNF687Q8N1G0 1237 aa24.4■■□□□ 1.5
CPNE9-204ENST00000491802 ZNF276Q8N554 614 aa24.4■■□□□ 1.5
CPNE9-204ENST00000491802 RTN4Q9NQC3 1192 aaKnown RBP24.4■■□□□ 1.5
CPNE9-204ENST00000491802 RAPGEFL1Q9UHV5 662 aa24.4■■□□□ 1.5
CPNE9-204ENST00000491802 PCDHGC3Q9UN70 934 aa24.4■■□□□ 1.5
CPNE9-204ENST00000491802 SERPINC1P01008 464 aa24.39■■□□□ 1.49
CPNE9-204ENST00000491802 IRF1P10914 325 aa24.39■■□□□ 1.49
CPNE9-204ENST00000491802 CYP11B1P15538 503 aa24.39■■□□□ 1.49
CPNE9-204ENST00000491802 RUNX3Q13761 415 aa24.39■■□□□ 1.49
CPNE9-204ENST00000491802 ITPRIPL2Q3MIP1 535 aa24.39■■□□□ 1.49
CPNE9-204ENST00000491802 KLHDC10Q6PID8 442 aa24.39■■□□□ 1.49
CPNE9-204ENST00000491802 RALGPS2Q86X27 583 aaPredicted RBP24.39■■□□□ 1.49
CPNE9-204ENST00000491802 SCML4Q8N228 414 aa24.39■■□□□ 1.49
CPNE9-204ENST00000491802 CLDN23Q96B33 292 aa24.39■■□□□ 1.49
CPNE9-204ENST00000491802 SPAG5Q96R06 1193 aa24.39■■□□□ 1.49
CPNE9-204ENST00000491802 CDK5RAP1Q96SZ6 601 aaKnown RBP24.39■■□□□ 1.49
CPNE9-204ENST00000491802 CYTH4Q9UIA0 394 aa24.39■■□□□ 1.49
CPNE9-204ENST00000491802 DNMT3LQ9UJW3 386 aa24.39■■□□□ 1.49
CPNE9-204ENST00000491802 YJEFN3A6XGL0 299 aa24.38■■□□□ 1.49
CPNE9-204ENST00000491802 E7ENQ6 273 aa24.38■■□□□ 1.49
CPNE9-204ENST00000491802 KRT9P35527 623 aa24.38■■□□□ 1.49
CPNE9-204ENST00000491802 JAM2P57087 298 aa24.38■■□□□ 1.49
CPNE9-204ENST00000491802 PDCLQ13371 301 aa24.38■■□□□ 1.49
CPNE9-204ENST00000491802 UBXN2BQ14CS0 331 aa24.38■■□□□ 1.49
CPNE9-204ENST00000491802 EML3Q32P44 896 aa24.38■■□□□ 1.49
CPNE9-204ENST00000491802 RSRC2Q7L4I2 434 aaKnown RBP24.38■■□□□ 1.49
CPNE9-204ENST00000491802 PRSS33Q8NF86 280 aa24.38■■□□□ 1.49
CPNE9-204ENST00000491802 CLEC4CQ8WTT0 213 aa24.38■■□□□ 1.49
CPNE9-204ENST00000491802 STK32AQ8WU08 396 aa24.38■■□□□ 1.49
CPNE9-204ENST00000491802 ATP2A3Q93084 1043 aa24.38■■□□□ 1.49
CPNE9-204ENST00000491802 MIS12Q9H081 205 aa24.38■■□□□ 1.49
CPNE9-204ENST00000491802 RASAL2Q9UJF2 1139 aa24.38■■□□□ 1.49
CPNE9-204ENST00000491802 SH3BP1Q9Y3L3 701 aa24.38■■□□□ 1.49
CPNE9-204ENST00000491802 A0A1B0GTH6 734 aa24.37■■□□□ 1.49
CPNE9-204ENST00000491802 SPECC1L-ADORA2AF8WAN1 911 aa24.37■■□□□ 1.49
CPNE9-204ENST00000491802 NCAM2O15394 837 aa24.37■■□□□ 1.49
CPNE9-204ENST00000491802 GFPT2O94808 682 aa24.37■■□□□ 1.49
CPNE9-204ENST00000491802 FBXO21O94952 628 aa24.37■■□□□ 1.49
CPNE9-204ENST00000491802 CTHP32929 405 aa24.37■■□□□ 1.49
CPNE9-204ENST00000491802 SOX5P35711 763 aa24.37■■□□□ 1.49
CPNE9-204ENST00000491802 ACADSBP45954 432 aa24.37■■□□□ 1.49
CPNE9-204ENST00000491802 RPS9P46781 194 aaKnown RBP24.37■■□□□ 1.49
CPNE9-204ENST00000491802 RPL34P49207 117 aaKnown RBP24.37■■□□□ 1.49
CPNE9-204ENST00000491802 GOLGA8FQ08AF8 430 aa24.37■■□□□ 1.49
CPNE9-204ENST00000491802 GOLGA8DPQ0D2H9 430 aa24.37■■□□□ 1.49
CPNE9-204ENST00000491802 TAF3Q5VWG9 929 aa24.37■■□□□ 1.49
CPNE9-204ENST00000491802 BTBD8Q5XKL5 378 aa24.37■■□□□ 1.49
CPNE9-204ENST00000491802 MIB1Q86YT6 1006 aa24.37■■□□□ 1.49
CPNE9-204ENST00000491802 CPA6Q8N4T0 437 aa24.37■■□□□ 1.49
CPNE9-204ENST00000491802 C1orf131Q8NDD1 294 aaKnown RBP24.37■■□□□ 1.49
CPNE9-204ENST00000491802 IRGQQ8WZA9 623 aa24.37■■□□□ 1.49
CPNE9-204ENST00000491802 KLF16Q9BXK1 252 aaPredicted RBP24.37■■□□□ 1.49
CPNE9-204ENST00000491802 SLC4A5Q9BY07 1137 aa24.37■■□□□ 1.49
CPNE9-204ENST00000491802 IRF2BPLQ9H1B7 796 aa24.37■■□□□ 1.49
CPNE9-204ENST00000491802 TSPY26PQ9H489 355 aa24.37■■□□□ 1.49
CPNE9-204ENST00000491802 CEP83Q9Y592 693 aa24.37■■□□□ 1.49
CPNE9-204ENST00000491802 E2F8A0AVK6 867 aa24.36■■□□□ 1.49
CPNE9-204ENST00000491802 OTOL1A6NHN0 477 aaPredicted RBP24.36■■□□□ 1.49
CPNE9-204ENST00000491802 FAM170BA6NMN3 283 aa24.36■■□□□ 1.49
CPNE9-204ENST00000491802 E5RJQ4 531 aa24.36■■□□□ 1.49
CPNE9-204ENST00000491802 TARSP26639 723 aaKnown RBP24.36■■□□□ 1.49
CPNE9-204ENST00000491802 PTPN5P54829 565 aa24.36■■□□□ 1.49
CPNE9-204ENST00000491802 EFEMP1Q12805 493 aa24.36■■□□□ 1.49
CPNE9-204ENST00000491802 TCF15Q12870 199 aa24.36■■□□□ 1.49
CPNE9-204ENST00000491802 FZD5Q13467 585 aa24.36■■□□□ 1.49
CPNE9-204ENST00000491802 BSPRYQ5W0U4 402 aa24.36■■□□□ 1.49
CPNE9-204ENST00000491802 LRSAM1Q6UWE0 723 aa24.36■■□□□ 1.49
CPNE9-204ENST00000491802 NOP9Q86U38 636 aaKnown RBP24.36■■□□□ 1.49
Retrieved 100 of 20,778 RNA–protein pairs in 50.5 ms