RNA–Protein interactions for RNA: ENST00000491729.1

LSS-210, Transcript of lanosterol synthase, humanhuman

TSL 2

Gene LSS, Length 2,143 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSS-210ENST00000491729 UBQLN1Q9UMX0 589 aaKnown RBP13.73□□□□□ -0.21
LSS-210ENST00000491729 SMG5Q9UPR3 1016 aaKnown RBP13.73□□□□□ -0.21
LSS-210ENST00000491729 ARL2BPQ9Y2Y0 163 aa13.73□□□□□ -0.21
LSS-210ENST00000491729 FAM47DPA6NHR8 397 aa13.72□□□□□ -0.21
LSS-210ENST00000491729 RASA4BC9J798 803 aa13.72□□□□□ -0.21
LSS-210ENST00000491729 F8VP50 259 aa13.72□□□□□ -0.21
LSS-210ENST00000491729 RASA4O43374 803 aa13.72□□□□□ -0.21
LSS-210ENST00000491729 GJB6O95452 261 aa13.72□□□□□ -0.21
LSS-210ENST00000491729 THP07101 528 aa13.72□□□□□ -0.21
LSS-210ENST00000491729 KRT10P13645 584 aa13.72□□□□□ -0.21
LSS-210ENST00000491729 LILRA4P59901 499 aa13.72□□□□□ -0.21
LSS-210ENST00000491729 GPS1Q13098 491 aa13.72□□□□□ -0.21
LSS-210ENST00000491729 ACAP1Q15027 740 aa13.72□□□□□ -0.21
LSS-210ENST00000491729 LRRC14Q15048 493 aa13.72□□□□□ -0.21
LSS-210ENST00000491729 SPRED3Q2MJR0 410 aa13.72□□□□□ -0.21
LSS-210ENST00000491729 COL13A1Q5TAT6 717 aaPredicted RBP13.72□□□□□ -0.21
LSS-210ENST00000491729 SPATA21Q7Z572 469 aa13.72□□□□□ -0.21
LSS-210ENST00000491729 NT5DC4Q86YG4 428 aa13.72□□□□□ -0.21
LSS-210ENST00000491729 PARP9Q8IXQ6 854 aa13.72□□□□□ -0.21
LSS-210ENST00000491729 SRRM1Q8IYB3 904 aaKnown RBP13.72□□□□□ -0.21
LSS-210ENST00000491729 BEST2Q8NFU1 509 aa13.72□□□□□ -0.21
LSS-210ENST00000491729 MAGEC3Q8TD91 643 aa13.72□□□□□ -0.21
LSS-210ENST00000491729 FAM118BQ9BPY3 351 aa13.72□□□□□ -0.21
LSS-210ENST00000491729 FAM124BQ9H5Z6 455 aaPredicted RBP13.72□□□□□ -0.21
LSS-210ENST00000491729 SLC24A2Q9UI40 661 aa13.72□□□□□ -0.21
LSS-210ENST00000491729 SIGLEC16A6NMB1 481 aa13.72□□□□□ -0.21
LSS-210ENST00000491729 I3L4J1 428 aa13.72□□□□□ -0.21
LSS-210ENST00000491729 KIAA0355O15063 1070 aa13.72□□□□□ -0.21
LSS-210ENST00000491729 PRPF4O43172 522 aaKnown RBP eCLIP13.72□□□□□ -0.21
LSS-210ENST00000491729 TIMP1P01033 207 aa13.72□□□□□ -0.21
LSS-210ENST00000491729 PECAM1P16284 738 aaPredicted RBP13.72□□□□□ -0.21
LSS-210ENST00000491729 PSMA2P25787 234 aa13.72□□□□□ -0.21
LSS-210ENST00000491729 LRPAP1P30533 357 aa13.72□□□□□ -0.21
LSS-210ENST00000491729 TMED2Q15363 201 aa13.72□□□□□ -0.21
LSS-210ENST00000491729 ZNF667Q5HYK9 610 aa13.72□□□□□ -0.21
LSS-210ENST00000491729 RNASEH2BQ5TBB1 312 aaKnown RBP13.72□□□□□ -0.21
LSS-210ENST00000491729 SLC35B2Q8TB61 432 aa13.72□□□□□ -0.21
LSS-210ENST00000491729 HASPINQ8TF76 798 aa13.72□□□□□ -0.21
LSS-210ENST00000491729 ELOVL4Q9GZR5 314 aa13.72□□□□□ -0.21
LSS-210ENST00000491729 HAUS2Q9NVX0 235 aa13.72□□□□□ -0.21
LSS-210ENST00000491729 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP13.72□□□□□ -0.217e-8■□□□□ 11.3
LSS-210ENST00000491729 DNAJB4Q9UDY4 337 aa13.72□□□□□ -0.21
LSS-210ENST00000491729 SNX9Q9Y5X1 595 aa13.72□□□□□ -0.21
LSS-210ENST00000491729 TDRD15B5MCY1 1934 aaKnown RBP13.71□□□□□ -0.21
LSS-210ENST00000491729 SGK1O00141 431 aa13.71□□□□□ -0.21
LSS-210ENST00000491729 KRT3P12035 628 aa13.71□□□□□ -0.21
LSS-210ENST00000491729 LMO2P25791 158 aa13.71□□□□□ -0.21
LSS-210ENST00000491729 PHBP35232 272 aa13.71□□□□□ -0.21
LSS-210ENST00000491729 RAB27AP51159 221 aa13.71□□□□□ -0.21
LSS-210ENST00000491729 OGDHQ02218 1023 aa13.71□□□□□ -0.21
LSS-210ENST00000491729 TRABD2AQ86V40 505 aa13.71□□□□□ -0.21
LSS-210ENST00000491729 KBTBD7Q8WVZ9 684 aa13.71□□□□□ -0.21
LSS-210ENST00000491729 SEPT8Q92599 483 aa13.71□□□□□ -0.21
LSS-210ENST00000491729 TACO1Q9BSH4 297 aaKnown RBP13.71□□□□□ -0.21
LSS-210ENST00000491729 TBK1Q9UHD2 729 aa13.71□□□□□ -0.21
LSS-210ENST00000491729 MICAL3Q7RTP6 2002 aa13.71□□□□□ -0.21
LSS-210ENST00000491729 CHD9Q3L8U1 2897 aa13.71□□□□□ -0.22
LSS-210ENST00000491729 ATP2C2O75185 946 aa13.7□□□□□ -0.22
LSS-210ENST00000491729 EOMESO95936 686 aa13.7□□□□□ -0.22
LSS-210ENST00000491729 P4HA1P13674 534 aa13.7□□□□□ -0.22
LSS-210ENST00000491729 TCF4P15884 667 aa13.7□□□□□ -0.22
LSS-210ENST00000491729 RAD23BP54727 409 aa13.7□□□□□ -0.22
LSS-210ENST00000491729 SLC25A11Q02978 314 aaKnown RBP13.7□□□□□ -0.22
LSS-210ENST00000491729 HIF1AQ16665 826 aa13.7□□□□□ -0.22
LSS-210ENST00000491729 UPP1Q16831 310 aa13.7□□□□□ -0.22
LSS-210ENST00000491729 ATP13A4Q4VNC1 1196 aa13.7□□□□□ -0.22
LSS-210ENST00000491729 BBS12Q6ZW61 710 aa13.7□□□□□ -0.22
LSS-210ENST00000491729 WDTC1Q8N5D0 677 aa13.7□□□□□ -0.22
LSS-210ENST00000491729 CCDC63Q8NA47 563 aa13.7□□□□□ -0.22
LSS-210ENST00000491729 MAML1Q92585 1016 aa13.7□□□□□ -0.22
LSS-210ENST00000491729 PRCCQ92733 491 aaPredicted RBP13.7□□□□□ -0.22
LSS-210ENST00000491729 PWWP2AQ96N64 755 aa13.7□□□□□ -0.22
LSS-210ENST00000491729 CASD1Q96PB1 797 aa13.7□□□□□ -0.22
LSS-210ENST00000491729 TIMM13Q9Y5L4 95 aaPredicted RBP13.7□□□□□ -0.22
LSS-210ENST00000491729 COL4A6Q14031 1691 aa13.7□□□□□ -0.22
LSS-210ENST00000491729 ALOX15BO15296 676 aa13.7□□□□□ -0.22
LSS-210ENST00000491729 INPPL1O15357 1258 aa13.7□□□□□ -0.22
LSS-210ENST00000491729 CD19P15391 556 aa13.7□□□□□ -0.22
LSS-210ENST00000491729 CREB1P16220 341 aa13.7□□□□□ -0.22
LSS-210ENST00000491729 CYP3A5P20815 502 aa13.7□□□□□ -0.22
LSS-210ENST00000491729 ATICP31939 592 aa13.7□□□□□ -0.22
LSS-210ENST00000491729 SLC8A1P32418 973 aa13.7□□□□□ -0.22
LSS-210ENST00000491729 PBX3P40426 434 aa13.7□□□□□ -0.22
LSS-210ENST00000491729 DEFB103AP81534 67 aa13.7□□□□□ -0.22
LSS-210ENST00000491729 PLCB3Q01970 1234 aa13.7□□□□□ -0.22
LSS-210ENST00000491729 CCDC15Q0P6D6 951 aa13.7□□□□□ -0.22
LSS-210ENST00000491729 ZNF268Q14587 947 aaPredicted RBP13.7□□□□□ -0.22
LSS-210ENST00000491729 TAZQ16635 292 aa13.7□□□□□ -0.22
LSS-210ENST00000491729 PTPN20Q4JDL3 420 aa13.7□□□□□ -0.22
LSS-210ENST00000491729 RGS9BPQ6ZS82 235 aa13.7□□□□□ -0.22
LSS-210ENST00000491729 LIMS2Q7Z4I7 341 aa13.7□□□□□ -0.22
LSS-210ENST00000491729 PPIL6Q8IXY8 311 aa13.7□□□□□ -0.22
LSS-210ENST00000491729 CYP4X1Q8N118 509 aa13.7□□□□□ -0.22
LSS-210ENST00000491729 TTC39CQ8N584 583 aa13.7□□□□□ -0.22
LSS-210ENST00000491729 SMC6Q96SB8 1091 aa13.7□□□□□ -0.22
LSS-210ENST00000491729 FTHL17Q9BXU8 183 aa13.7□□□□□ -0.22
LSS-210ENST00000491729 MIS12Q9H081 205 aa13.7□□□□□ -0.22
LSS-210ENST00000491729 SYNCQ9H7C4 482 aa13.7□□□□□ -0.22
LSS-210ENST00000491729 SSU72Q9NP77 194 aaKnown RBP13.7□□□□□ -0.22
LSS-210ENST00000491729 TBC1D13Q9NVG8 400 aa13.7□□□□□ -0.22
Retrieved 100 of 20,778 RNA–protein pairs in 21.6 ms