RNA–Protein interactions for RNA: ENST00000491659.5

USP39-217, Transcript of ubiquitin specific peptidase 39, humanhuman

TSL 3

Gene USP39, Length 648 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP39-217ENST00000491659 ARHGEF19Q8IW93 802 aa15.86■□□□□ 0.13
USP39-217ENST00000491659 ZNF276Q8N554 614 aa15.86■□□□□ 0.13
USP39-217ENST00000491659 RBBP8NLQ8NC74 664 aaPredicted RBP15.86■□□□□ 0.13
USP39-217ENST00000491659 RPLP0P6Q8NHW5 317 aa15.86■□□□□ 0.13
USP39-217ENST00000491659 KAT5Q92993 513 aa15.86■□□□□ 0.13
USP39-217ENST00000491659 EPC1Q9H2F5 836 aa15.86■□□□□ 0.13
USP39-217ENST00000491659 RASAL2Q9UJF2 1139 aa15.86■□□□□ 0.13
USP39-217ENST00000491659 NUDT5Q9UKK9 219 aa15.86■□□□□ 0.13
USP39-217ENST00000491659 SMG5Q9UPR3 1016 aaKnown RBP15.86■□□□□ 0.13
USP39-217ENST00000491659 M0QYV0 167 aa15.85■□□□□ 0.13
USP39-217ENST00000491659 MDM4O15151 490 aa15.85■□□□□ 0.13
USP39-217ENST00000491659 ZBED1O96006 694 aa15.85■□□□□ 0.13
USP39-217ENST00000491659 APODP05090 189 aa15.85■□□□□ 0.13
USP39-217ENST00000491659 PLA2G4AP47712 749 aa15.85■□□□□ 0.13
USP39-217ENST00000491659 FNTBP49356 437 aa15.85■□□□□ 0.13
USP39-217ENST00000491659 YWHAGP61981 247 aaKnown RBP eCLIP15.85■□□□□ 0.13
USP39-217ENST00000491659 ADIGQ0VDE8 80 aa15.85■□□□□ 0.13
USP39-217ENST00000491659 ANO4Q32M45 955 aa15.85■□□□□ 0.13
USP39-217ENST00000491659 HEATR6Q6AI08 1181 aaKnown RBP15.85■□□□□ 0.13
USP39-217ENST00000491659 RHBDF2Q6PJF5 856 aa15.85■□□□□ 0.13
USP39-217ENST00000491659 HTR3DQ70Z44 454 aa15.85■□□□□ 0.13
USP39-217ENST00000491659 RSRC2Q7L4I2 434 aaKnown RBP15.85■□□□□ 0.13
USP39-217ENST00000491659 SCD5Q86SK9 330 aa15.85■□□□□ 0.13
USP39-217ENST00000491659 FAM114A1Q8IWE2 563 aa15.85■□□□□ 0.13
USP39-217ENST00000491659 SIX6OS1Q8N1H7 587 aa15.85■□□□□ 0.13
USP39-217ENST00000491659 SUMF1Q8NBK3 374 aa15.85■□□□□ 0.13
USP39-217ENST00000491659 UBA3Q8TBC4 463 aa15.85■□□□□ 0.13
USP39-217ENST00000491659 RUBCNQ92622 972 aa15.85■□□□□ 0.13
USP39-217ENST00000491659 EZH1Q92800 747 aaPredicted RBP15.85■□□□□ 0.13
USP39-217ENST00000491659 SECISBP2LQ93073 1101 aaKnown RBP15.85■□□□□ 0.13
USP39-217ENST00000491659 WBP2Q969T9 261 aa15.85■□□□□ 0.13
USP39-217ENST00000491659 IPO9Q96P70 1041 aaKnown RBP15.85■□□□□ 0.13
USP39-217ENST00000491659 PNKPQ96T60 521 aa15.85■□□□□ 0.13
USP39-217ENST00000491659 ULBP1Q9BZM6 244 aa15.85■□□□□ 0.13
USP39-217ENST00000491659 SPHK2Q9NRA0 654 aa15.85■□□□□ 0.13
USP39-217ENST00000491659 C2orf42Q9NWW7 574 aa15.85■□□□□ 0.13
USP39-217ENST00000491659 NCDNQ9UBB6 729 aa15.85■□□□□ 0.13
USP39-217ENST00000491659 RAB23Q9ULC3 237 aa15.85■□□□□ 0.13
USP39-217ENST00000491659 GOLGA6L22H0YM25 854 aa15.84■□□□□ 0.13
USP39-217ENST00000491659 TULP2O00295 520 aa15.84■□□□□ 0.13
USP39-217ENST00000491659 KRT5P13647 590 aa15.84■□□□□ 0.13
USP39-217ENST00000491659 BRD2P25440 801 aaKnown RBP15.84■□□□□ 0.13
USP39-217ENST00000491659 HOXA6P31267 233 aa15.84■□□□□ 0.13
USP39-217ENST00000491659 CNR2P34972 360 aa15.84■□□□□ 0.13
USP39-217ENST00000491659 MTIF2P46199 727 aaKnown RBP15.84■□□□□ 0.13
USP39-217ENST00000491659 SEC13P55735 322 aa15.84■□□□□ 0.13
USP39-217ENST00000491659 KDSRQ06136 332 aa15.84■□□□□ 0.13
USP39-217ENST00000491659 DMWDQ09019 674 aa15.84■□□□□ 0.13
USP39-217ENST00000491659 EFEMP1Q12805 493 aa15.84■□□□□ 0.13
USP39-217ENST00000491659 DPCR1Q3MIW9 517 aa15.84■□□□□ 0.13
USP39-217ENST00000491659 PREPLQ4J6C6 727 aaPredicted RBP15.84■□□□□ 0.13
USP39-217ENST00000491659 LCLAT1Q6UWP7 414 aa15.84■□□□□ 0.13
USP39-217ENST00000491659 ENOSF1Q7L5Y1 443 aa15.84■□□□□ 0.13
USP39-217ENST00000491659 MIB1Q86YT6 1006 aa15.84■□□□□ 0.13
USP39-217ENST00000491659 KCTD13Q8WZ19 329 aa15.84■□□□□ 0.13
USP39-217ENST00000491659 FAM81BQ96LP2 452 aa15.84■□□□□ 0.13
USP39-217ENST00000491659 THAP9Q9H5L6 903 aa15.84■□□□□ 0.13
USP39-217ENST00000491659 ARHGEF4Q9NR80 690 aa15.84■□□□□ 0.13
USP39-217ENST00000491659 LMBRD1Q9NUN5 540 aa15.84■□□□□ 0.13
USP39-217ENST00000491659 STRIP2Q9ULQ0 834 aa15.84■□□□□ 0.13
USP39-217ENST00000491659 WDR3Q9UNX4 943 aaKnown RBP eCLIP15.84■□□□□ 0.13
USP39-217ENST00000491659 VPS13AQ96RL7 3174 aa15.83■□□□□ 0.13
USP39-217ENST00000491659 HOXC11O43248 304 aaPredicted RBP15.83■□□□□ 0.12
USP39-217ENST00000491659 KAT7O95251 611 aa15.83■□□□□ 0.12
USP39-217ENST00000491659 ZNF132P52740 706 aa15.83■□□□□ 0.12
USP39-217ENST00000491659 COG7P83436 770 aa15.83■□□□□ 0.12
USP39-217ENST00000491659 CNGA2Q16280 664 aa15.83■□□□□ 0.12
USP39-217ENST00000491659 PM20D1Q6GTS8 502 aa15.83■□□□□ 0.12
USP39-217ENST00000491659 TRIM65Q6PJ69 517 aa15.83■□□□□ 0.12
USP39-217ENST00000491659 GBP6Q6ZN66 633 aa15.83■□□□□ 0.12
USP39-217ENST00000491659 PRR23BQ6ZRT6 265 aa15.83■□□□□ 0.12
USP39-217ENST00000491659 SYT13Q7L8C5 426 aa15.83■□□□□ 0.12
USP39-217ENST00000491659 WDR5BQ86VZ2 330 aa15.83■□□□□ 0.12
USP39-217ENST00000491659 C12orf40Q86WS4 652 aa15.83■□□□□ 0.12
USP39-217ENST00000491659 CAMKK1Q8N5S9 505 aa15.83■□□□□ 0.12
USP39-217ENST00000491659 TFAP2BQ92481 460 aa15.83■□□□□ 0.12
USP39-217ENST00000491659 KREMEN1Q96MU8 473 aa15.83■□□□□ 0.12
USP39-217ENST00000491659 MED15Q96RN5 788 aa15.83■□□□□ 0.12
USP39-217ENST00000491659 UBE2TQ9NPD8 197 aaPredicted RBP15.83■□□□□ 0.12
USP39-217ENST00000491659 CNGB3Q9NQW8 809 aa15.83■□□□□ 0.12
USP39-217ENST00000491659 OLA1Q9NTK5 396 aaKnown RBP15.83■□□□□ 0.12
USP39-217ENST00000491659 ZNF510Q9Y2H8 683 aa15.83■□□□□ 0.12
USP39-217ENST00000491659 FAM186AA6NE01 2351 aa15.83■□□□□ 0.12
USP39-217ENST00000491659 DMDP11532 3685 aa15.82■□□□□ 0.12
USP39-217ENST00000491659 K7EQS6 105 aa15.82■□□□□ 0.12
USP39-217ENST00000491659 RNF225M0QZC1 329 aaPredicted RBP15.82■□□□□ 0.12
USP39-217ENST00000491659 GREM1O60565 184 aa15.82■□□□□ 0.12
USP39-217ENST00000491659 STC2O76061 302 aa15.82■□□□□ 0.12
USP39-217ENST00000491659 LCP1P13796 627 aa15.82■□□□□ 0.12
USP39-217ENST00000491659 ERCC5P28715 1186 aaPredicted RBP15.82■□□□□ 0.12
USP39-217ENST00000491659 GRIA2P42262 883 aa15.82■□□□□ 0.12
USP39-217ENST00000491659 SLC6A11P48066 632 aa15.82■□□□□ 0.12
USP39-217ENST00000491659 MFAP3P55082 362 aa15.82■□□□□ 0.12
USP39-217ENST00000491659 SIM2Q14190 667 aaPredicted RBP15.82■□□□□ 0.12
USP39-217ENST00000491659 DMC1Q14565 340 aa15.82■□□□□ 0.12
USP39-217ENST00000491659 PKDCCQ504Y2 493 aa15.82■□□□□ 0.12
USP39-217ENST00000491659 C2orf27AQ580R0 203 aa15.82■□□□□ 0.12
USP39-217ENST00000491659 NUDT18Q6ZVK8 323 aa15.82■□□□□ 0.12
USP39-217ENST00000491659 NAT16Q8N8M0 369 aa15.82■□□□□ 0.12
USP39-217ENST00000491659 USP33Q8TEY7 942 aa15.82■□□□□ 0.12
Retrieved 100 of 20,778 RNA–protein pairs in 26 ms