RNA–Protein interactions for RNA: ENST00000491592.1

RTN4-215, Transcript of reticulon 4, humanhuman

TSL 2

Gene RTN4, Length 860 nt, Biotype retained intron, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTN4-215ENST00000491592 ORC3Q9UBD5 711 aaPredicted RBP5.16□□□□□ -1.58
RTN4-215ENST00000491592 AASSQ9UDR5 926 aa5.16□□□□□ -1.58
RTN4-215ENST00000491592 ST6GALNAC2Q9UJ37 374 aa5.16□□□□□ -1.58
RTN4-215ENST00000491592 CDC23Q9UJX2 597 aa5.16□□□□□ -1.58
RTN4-215ENST00000491592 FBXL5Q9UKA1 691 aa5.16□□□□□ -1.58
RTN4-215ENST00000491592 MAGED2Q9UNF1 606 aaPredicted RBP5.16□□□□□ -1.58
RTN4-215ENST00000491592 PCDHGB6Q9Y5F9 930 aa5.16□□□□□ -1.58
RTN4-215ENST00000491592 SYCE3A1L190 88 aa5.15□□□□□ -1.59
RTN4-215ENST00000491592 C2orf81A6NN90 581 aa5.15□□□□□ -1.59
RTN4-215ENST00000491592 PJA2O43164 708 aa5.15□□□□□ -1.59
RTN4-215ENST00000491592 CTIFO43310 598 aaKnown RBP5.15□□□□□ -1.59
RTN4-215ENST00000491592 TSPAN3O60637 253 aa5.15□□□□□ -1.59
RTN4-215ENST00000491592 ZNF623O75123 536 aa5.15□□□□□ -1.59
RTN4-215ENST00000491592 FTLP02792 175 aaPredicted RBP5.15□□□□□ -1.59
RTN4-215ENST00000491592 SNRPA1P09661 255 aaKnown RBP5.15□□□□□ -1.59
RTN4-215ENST00000491592 SFTPCP11686 197 aa5.15□□□□□ -1.59
RTN4-215ENST00000491592 INSRRP14616 1297 aa5.15□□□□□ -1.59
RTN4-215ENST00000491592 ATP5JP18859 108 aa5.15□□□□□ -1.59
RTN4-215ENST00000491592 ACO1P21399 889 aaKnown RBP5.15□□□□□ -1.59
RTN4-215ENST00000491592 ABCB4P21439 1286 aa5.15□□□□□ -1.59
RTN4-215ENST00000491592 IL4RP24394 825 aa5.15□□□□□ -1.59
RTN4-215ENST00000491592 HNF4AP41235 474 aa5.15□□□□□ -1.59
RTN4-215ENST00000491592 SELENOPP49908 381 aa5.15□□□□□ -1.59
RTN4-215ENST00000491592 CACNB3P54284 484 aa5.15□□□□□ -1.59
RTN4-215ENST00000491592 RNASE9P60153 205 aaKnown RBP5.15□□□□□ -1.59
RTN4-215ENST00000491592 HHEXQ03014 270 aa5.15□□□□□ -1.59
RTN4-215ENST00000491592 TLE1Q04724 770 aa5.15□□□□□ -1.59
RTN4-215ENST00000491592 DCAF17Q5H9S7 520 aaPredicted RBP5.15□□□□□ -1.59
RTN4-215ENST00000491592 TTC22Q5TAA0 569 aa5.15□□□□□ -1.59
RTN4-215ENST00000491592 ANKS6Q68DC2 871 aa5.15□□□□□ -1.59
RTN4-215ENST00000491592 OTUD7BQ6GQQ9 843 aa5.15□□□□□ -1.59
RTN4-215ENST00000491592 KRTAP5-3Q6L8H2 238 aa5.15□□□□□ -1.59
RTN4-215ENST00000491592 CRTC1Q6UUV9 634 aa5.15□□□□□ -1.59
RTN4-215ENST00000491592 GADL1Q6ZQY3 521 aa5.15□□□□□ -1.59
RTN4-215ENST00000491592 DZIP1Q86YF9 867 aaKnown RBP5.15□□□□□ -1.59
RTN4-215ENST00000491592 PLXDC1Q8IUK5 500 aa5.15□□□□□ -1.59
RTN4-215ENST00000491592 DENND1CQ8IV53 801 aa5.15□□□□□ -1.59
RTN4-215ENST00000491592 KRT78Q8N1N4 520 aa5.15□□□□□ -1.59
RTN4-215ENST00000491592 CAMKK1Q8N5S9 505 aa5.15□□□□□ -1.59
RTN4-215ENST00000491592 DCBLD1Q8N8Z6 715 aa5.15□□□□□ -1.59
RTN4-215ENST00000491592 ZBTB34Q8NCN2 500 aa5.15□□□□□ -1.59
RTN4-215ENST00000491592 MDGA1Q8NFP4 955 aa5.15□□□□□ -1.59
RTN4-215ENST00000491592 TOR1AIP2Q8NFQ8 470 aa5.15□□□□□ -1.59
RTN4-215ENST00000491592 GABPB2Q8TAK5 448 aaPredicted RBP5.15□□□□□ -1.59
RTN4-215ENST00000491592 SLC35B2Q8TB61 432 aa5.15□□□□□ -1.59
RTN4-215ENST00000491592 BICD2Q8TD16 824 aa5.15□□□□□ -1.59
RTN4-215ENST00000491592 SMCR8Q8TEV9 937 aaPredicted RBP5.15□□□□□ -1.59
RTN4-215ENST00000491592 STON2Q8WXE9 905 aa5.15□□□□□ -1.59
RTN4-215ENST00000491592 ANKRD7Q92527 254 aa5.15□□□□□ -1.59
RTN4-215ENST00000491592 MIEF2Q96C03 454 aa5.15□□□□□ -1.59
RTN4-215ENST00000491592 FAM89AQ96GI7 184 aa5.15□□□□□ -1.59
RTN4-215ENST00000491592 WWC2-AS2Q96NR7 200 aa5.15□□□□□ -1.59
RTN4-215ENST00000491592 PLEKHF1Q96S99 279 aa5.15□□□□□ -1.59
RTN4-215ENST00000491592 CPPED1Q9BRF8 314 aaPredicted RBP5.15□□□□□ -1.59
RTN4-215ENST00000491592 TMEM120AQ9BXJ8 343 aa5.15□□□□□ -1.59
RTN4-215ENST00000491592 TXLNGYQ9BZA5 131 aa5.15□□□□□ -1.59
RTN4-215ENST00000491592 CPEB1Q9BZB8 566 aaKnown RBP5.15□□□□□ -1.59
RTN4-215ENST00000491592 API5Q9BZZ5 524 aaKnown RBP5.15□□□□□ -1.59
RTN4-215ENST00000491592 TSPYL1Q9H0U9 437 aa5.15□□□□□ -1.59
RTN4-215ENST00000491592 STARD7Q9NQZ5 370 aa5.15□□□□□ -1.59
RTN4-215ENST00000491592 C6orf203Q9P0P8 240 aaPredicted RBP5.15□□□□□ -1.59
RTN4-215ENST00000491592 CEP72Q9P209 647 aa5.15□□□□□ -1.59
RTN4-215ENST00000491592 RASAL2Q9UJF2 1139 aa5.15□□□□□ -1.59
RTN4-215ENST00000491592 C19orf53Q9UNZ5 99 aaPredicted RBP5.15□□□□□ -1.59
RTN4-215ENST00000491592 TCAF1Q9Y4C2 921 aa5.15□□□□□ -1.59
RTN4-215ENST00000491592 DEPDC5O75140 1603 aa5.15□□□□□ -1.59
RTN4-215ENST00000491592 ABCA6Q8N139 1617 aa5.15□□□□□ -1.59
RTN4-215ENST00000491592 ANKRD36BQ8N2N9 1353 aa5.15□□□□□ -1.59
RTN4-215ENST00000491592 ZC3H13Q5T200 1668 aaKnown RBP5.15□□□□□ -1.59
RTN4-215ENST00000491592 PTCH1Q13635 1447 aa5.14□□□□□ -1.59
RTN4-215ENST00000491592 IFT172Q9UG01 1749 aa5.14□□□□□ -1.59
RTN4-215ENST00000491592 VWDEQ8N2E2 1590 aa5.14□□□□□ -1.59
RTN4-215ENST00000491592 INO80Q9ULG1 1556 aaPredicted RBP5.14□□□□□ -1.59
RTN4-215ENST00000491592 C17orf113A0A1B0GUU1 675 aa5.14□□□□□ -1.59
RTN4-215ENST00000491592 LRRC14BA6NHZ5 514 aa5.14□□□□□ -1.59
RTN4-215ENST00000491592 PRR5-ARHGAP8B1AHC4 643 aa5.14□□□□□ -1.59
RTN4-215ENST00000491592 CASQ2O14958 399 aaPredicted RBP5.14□□□□□ -1.59
RTN4-215ENST00000491592 ADAMTS3O15072 1205 aa5.14□□□□□ -1.59
RTN4-215ENST00000491592 CYP27B1O15528 508 aa5.14□□□□□ -1.59
RTN4-215ENST00000491592 BBOX1O75936 387 aa5.14□□□□□ -1.59
RTN4-215ENST00000491592 GUCA1CO95843 209 aa5.14□□□□□ -1.59
RTN4-215ENST00000491592 SLC4A1P02730 911 aa5.14□□□□□ -1.59
RTN4-215ENST00000491592 CD1AP06126 327 aa5.14□□□□□ -1.59
RTN4-215ENST00000491592 TNFSF4P23510 183 aa5.14□□□□□ -1.59
RTN4-215ENST00000491592 ATP5F1P24539 256 aaPredicted RBP5.14□□□□□ -1.59
RTN4-215ENST00000491592 CD86P42081 329 aa5.14□□□□□ -1.59
RTN4-215ENST00000491592 IL12RB1P42701 662 aa5.14□□□□□ -1.59
RTN4-215ENST00000491592 MAP2K6P52564 334 aa5.14□□□□□ -1.59
RTN4-215ENST00000491592 CTXN1P60606 82 aa5.14□□□□□ -1.59
RTN4-215ENST00000491592 RAP2BP61225 183 aa5.14□□□□□ -1.59
RTN4-215ENST00000491592 CBX1P83916 185 aa5.14□□□□□ -1.59
RTN4-215ENST00000491592 NOGQ13253 232 aa5.14□□□□□ -1.59
RTN4-215ENST00000491592 CUL4AQ13619 759 aa5.14□□□□□ -1.59
RTN4-215ENST00000491592 PUM1Q14671 1186 aaKnown RBP eCLIP5.14□□□□□ -1.59
RTN4-215ENST00000491592 ANKRD1Q15327 319 aa5.14□□□□□ -1.59
RTN4-215ENST00000491592 LLGL1Q15334 1064 aa5.14□□□□□ -1.59
RTN4-215ENST00000491592 ASIC2Q16515 512 aa5.14□□□□□ -1.59
RTN4-215ENST00000491592 ATP2B3Q16720 1220 aa5.14□□□□□ -1.59
RTN4-215ENST00000491592 CCDC183Q5T5S1 534 aa5.14□□□□□ -1.59
RTN4-215ENST00000491592 THEMIS2Q5TEJ8 643 aa5.14□□□□□ -1.59
Retrieved 100 of 20,778 RNA–protein pairs in 24.9 ms