RNA–Protein interactions for RNA: ENST00000491165.5

USF3-203, Transcript of upstream transcription factor family member 3, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene USF3, Length 2,133 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USF3-203ENST00000491165 TNFAIP8L3Q5GJ75 292 aa23.79■■□□□ 1.4
USF3-203ENST00000491165 PRSS55Q6UWB4 352 aaPredicted RBP23.79■■□□□ 1.4
USF3-203ENST00000491165 TRMT10CQ7L0Y3 403 aaKnown RBP23.79■■□□□ 1.4
USF3-203ENST00000491165 TAOK1Q7L7X3 1001 aa23.79■■□□□ 1.4
USF3-203ENST00000491165 CCDC25Q86WR0 208 aa23.79■■□□□ 1.4
USF3-203ENST00000491165 HEXIM2Q96MH2 286 aaKnown RBP23.79■■□□□ 1.4
USF3-203ENST00000491165 PRO3102Q9H379 93 aa23.79■■□□□ 1.4
USF3-203ENST00000491165 CCDC134Q9H6E4 229 aa23.79■■□□□ 1.4
USF3-203ENST00000491165 FSCN2O14926 492 aa23.78■■□□□ 1.4
USF3-203ENST00000491165 THAP12O43422 761 aa23.78■■□□□ 1.4
USF3-203ENST00000491165 OAZ2O95190 189 aa23.78■■□□□ 1.4
USF3-203ENST00000491165 OR4Q2P0C623 313 aa23.78■■□□□ 1.4
USF3-203ENST00000491165 CD19P15391 556 aa23.78■■□□□ 1.4
USF3-203ENST00000491165 SCTRP47872 440 aa23.78■■□□□ 1.4
USF3-203ENST00000491165 AUHQ13825 339 aaKnown RBP23.78■■□□□ 1.4
USF3-203ENST00000491165 MRPL58Q14197 206 aaKnown RBP23.78■■□□□ 1.4
USF3-203ENST00000491165 SGO2Q562F6 1265 aa23.78■■□□□ 1.4
USF3-203ENST00000491165 PPP1R26Q5T8A7 1209 aaPredicted RBP23.78■■□□□ 1.4
USF3-203ENST00000491165 CHRDL2Q6WN34 429 aa23.78■■□□□ 1.4
USF3-203ENST00000491165 LRRTM3Q86VH5 581 aa23.78■■□□□ 1.4
USF3-203ENST00000491165 TAX1BP1Q86VP1 789 aa23.78■■□□□ 1.4
USF3-203ENST00000491165 TDHQ8IZJ6 230 aa23.78■■□□□ 1.4
USF3-203ENST00000491165 CRYBG2Q8N1P7 616 aa23.78■■□□□ 1.4
USF3-203ENST00000491165 B3GALNT2Q8NCR0 500 aa23.78■■□□□ 1.4
USF3-203ENST00000491165 ROPN1BQ9BZX4 212 aaPredicted RBP23.78■■□□□ 1.4
USF3-203ENST00000491165 ROPN1Q9HAT0 212 aaPredicted RBP23.78■■□□□ 1.4
USF3-203ENST00000491165 CHST7Q9NS84 486 aa23.78■■□□□ 1.4
USF3-203ENST00000491165 WHRNQ9P202 907 aa23.78■■□□□ 1.4
USF3-203ENST00000491165 DSEQ9UL01 958 aa23.78■■□□□ 1.4
USF3-203ENST00000491165 PCDHB12Q9Y5F1 795 aa23.78■■□□□ 1.4
USF3-203ENST00000491165 MYBPHLA2RUH7 354 aa23.78■■□□□ 1.4
USF3-203ENST00000491165 CLEC16AQ2KHT3 1053 aa23.78■■□□□ 1.4
USF3-203ENST00000491165 TTPALQ9BTX7 342 aa23.78■■□□□ 1.4
USF3-203ENST00000491165 ALG13Q9NP73 1137 aaKnown RBP23.78■■□□□ 1.4
USF3-203ENST00000491165 TMLHEQ9NVH6 421 aa23.78■■□□□ 1.4
USF3-203ENST00000491165 FAM163BP0C2L3 166 aa23.77■■□□□ 1.4
USF3-203ENST00000491165 CCDC130P13994 396 aa23.77■■□□□ 1.4
USF3-203ENST00000491165 BMPR1AP36894 532 aa23.77■■□□□ 1.4
USF3-203ENST00000491165 KRT17Q04695 432 aa23.77■■□□□ 1.4
USF3-203ENST00000491165 TTC39CQ8N584 583 aa23.77■■□□□ 1.4
USF3-203ENST00000491165 AUTS2Q8WXX7 1259 aa23.77■■□□□ 1.4
USF3-203ENST00000491165 PRMT1Q99873 361 aaKnown RBP23.77■■□□□ 1.4
USF3-203ENST00000491165 SYT15Q9BQS2 421 aa23.77■■□□□ 1.4
USF3-203ENST00000491165 ANAPC7Q9UJX3 599 aa23.77■■□□□ 1.4
USF3-203ENST00000491165 PTPRDP23468 1912 aa23.77■■□□□ 1.4
USF3-203ENST00000491165 MYO7AQ13402 2215 aa23.77■■□□□ 1.4
USF3-203ENST00000491165 C2CD2LO14523 706 aa23.77■■□□□ 1.4
USF3-203ENST00000491165 SOD2P04179 222 aa23.77■■□□□ 1.4
USF3-203ENST00000491165 CTNNB1P35222 781 aa23.77■■□□□ 1.4
USF3-203ENST00000491165 ELAVL2Q12926 359 aaKnown RBP23.77■■□□□ 1.4
USF3-203ENST00000491165 ITIH4Q14624 930 aa23.77■■□□□ 1.4
USF3-203ENST00000491165 METTL23Q86XA0 190 aa23.77■■□□□ 1.4
USF3-203ENST00000491165 PASD1Q8IV76 773 aa23.77■■□□□ 1.4
USF3-203ENST00000491165 C1orf54Q8WWF1 131 aa23.77■■□□□ 1.4
USF3-203ENST00000491165 PKMYT1Q99640 499 aa23.77■■□□□ 1.4
USF3-203ENST00000491165 AAASQ9NRG9 546 aa23.77■■□□□ 1.4
USF3-203ENST00000491165 PCDHA11Q9Y5I1 949 aa23.77■■□□□ 1.4
USF3-203ENST00000491165 SPTBN5Q9NRC6 3674 aaKnown RBP23.76■■□□□ 1.39
USF3-203ENST00000491165 CCT8L1PA6NM43 557 aa23.76■■□□□ 1.39
USF3-203ENST00000491165 PTPN1P18031 435 aaKnown RBP23.76■■□□□ 1.39
USF3-203ENST00000491165 TAP1Q03518 808 aa23.76■■□□□ 1.39
USF3-203ENST00000491165 USP41Q3LFD5 358 aa23.76■■□□□ 1.39
USF3-203ENST00000491165 PIGWQ7Z7B1 504 aa23.76■■□□□ 1.39
USF3-203ENST00000491165 DDX53Q86TM3 631 aaKnown RBP23.76■■□□□ 1.39
USF3-203ENST00000491165 LRRC34Q8IZ02 419 aa23.76■■□□□ 1.39
USF3-203ENST00000491165 VPS52Q8N1B4 723 aa23.76■■□□□ 1.39
USF3-203ENST00000491165 ACBD6Q9BR61 282 aa23.76■■□□□ 1.39
USF3-203ENST00000491165 CDC42EP4Q9H3Q1 356 aaKnown RBP23.76■■□□□ 1.39
USF3-203ENST00000491165 SAMD15Q9P1V8 674 aa23.76■■□□□ 1.39
USF3-203ENST00000491165 HSFX4A0A1B0GTS1 333 aaPredicted RBP23.75■■□□□ 1.39
USF3-203ENST00000491165 HSFX3A0A1B0GWH4 333 aaPredicted RBP23.75■■□□□ 1.39
USF3-203ENST00000491165 O00370 1275 aa23.75■■□□□ 1.39
USF3-203ENST00000491165 TBC1D4O60343 1298 aa23.75■■□□□ 1.39
USF3-203ENST00000491165 CSPG5O95196 566 aa23.75■■□□□ 1.39
USF3-203ENST00000491165 RPL17P18621 184 aaKnown RBP23.75■■□□□ 1.39
USF3-203ENST00000491165 DNAJB1P25685 340 aa23.75■■□□□ 1.39
USF3-203ENST00000491165 PPM1AP35813 382 aa23.75■■□□□ 1.39
USF3-203ENST00000491165 BPIFB4P59827 614 aa23.75■■□□□ 1.39
USF3-203ENST00000491165 MDH1BQ5I0G3 518 aa23.75■■□□□ 1.39
USF3-203ENST00000491165 PAQR9Q6ZVX9 377 aa23.75■■□□□ 1.39
USF3-203ENST00000491165 MAIP1Q8WWC4 291 aa23.75■■□□□ 1.39
USF3-203ENST00000491165 ASIC3Q9UHC3 531 aa23.75■■□□□ 1.39
USF3-203ENST00000491165 CLDN5O00501 218 aa23.75■■□□□ 1.39
USF3-203ENST00000491165 ADAM12O43184 909 aa23.75■■□□□ 1.39
USF3-203ENST00000491165 DNAJB2P25686 324 aa23.75■■□□□ 1.39
USF3-203ENST00000491165 MAN1A1P33908 653 aa23.75■■□□□ 1.39
USF3-203ENST00000491165 PLCB3Q01970 1234 aa23.75■■□□□ 1.39
USF3-203ENST00000491165 INTS6LQ5JSJ4 861 aaKnown RBP23.75■■□□□ 1.39
USF3-203ENST00000491165 SYDE1Q6ZW31 735 aaPredicted RBP23.75■■□□□ 1.39
USF3-203ENST00000491165 SPATA18Q8TC71 538 aa23.75■■□□□ 1.39
USF3-203ENST00000491165 PCED1BQ96HM7 432 aa23.75■■□□□ 1.39
USF3-203ENST00000491165 RHOBTB2Q9BYZ6 727 aa23.75■■□□□ 1.39
USF3-203ENST00000491165 NSRP1Q9H0G5 558 aaKnown RBP23.75■■□□□ 1.39
USF3-203ENST00000491165 CERS4Q9HA82 394 aa23.75■■□□□ 1.39
USF3-203ENST00000491165 TSPAN16Q9UKR8 245 aa23.75■■□□□ 1.39
USF3-203ENST00000491165 WDR3Q9UNX4 943 aaKnown RBP eCLIP23.75■■□□□ 1.39
USF3-203ENST00000491165 VDRP11473 427 aa23.74■■□□□ 1.39
USF3-203ENST00000491165 ITIH2P19823 946 aa23.74■■□□□ 1.39
USF3-203ENST00000491165 SNX1Q13596 522 aa23.74■■□□□ 1.39
USF3-203ENST00000491165 LLGL1Q15334 1064 aa23.74■■□□□ 1.39
Retrieved 100 of 20,778 RNA–protein pairs in 54.3 ms