RNA–Protein interactions for RNA: ENST00000491128.5

SMPD4-219, Transcript of sphingomyelin phosphodiesterase 4, humanhuman

TSL 1 (best)

Gene SMPD4, Length 2,570 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMPD4-219ENST00000491128 UNC80Q8N2C7 3258 aa14.53□□□□□ -0.08
SMPD4-219ENST00000491128 HOXA2O43364 376 aa14.53□□□□□ -0.08
SMPD4-219ENST00000491128 VNN2O95498 520 aa14.53□□□□□ -0.08
SMPD4-219ENST00000491128 ZSCAN5DPP0CG00 497 aa14.53□□□□□ -0.08
SMPD4-219ENST00000491128 PECAM1P16284 738 aaPredicted RBP14.53□□□□□ -0.08
SMPD4-219ENST00000491128 PCK1P35558 622 aa14.53□□□□□ -0.08
SMPD4-219ENST00000491128 DUSP4Q13115 394 aa14.53□□□□□ -0.08
SMPD4-219ENST00000491128 KRT81Q14533 505 aa14.53□□□□□ -0.08
SMPD4-219ENST00000491128 GLE1Q53GS7 698 aaKnown RBP14.53□□□□□ -0.08
SMPD4-219ENST00000491128 ZNF365Q70YC5 407 aa14.53□□□□□ -0.08
SMPD4-219ENST00000491128 SND1Q7KZF4 910 aaKnown RBP eCLIP14.53□□□□□ -0.08
SMPD4-219ENST00000491128 IFT20Q8IY31 132 aa14.53□□□□□ -0.08
SMPD4-219ENST00000491128 TTPALQ9BTX7 342 aa14.53□□□□□ -0.08
SMPD4-219ENST00000491128 C11orf84Q9BUA3 381 aaPredicted RBP14.53□□□□□ -0.08
SMPD4-219ENST00000491128 SLITRK6Q9H5Y7 841 aa14.53□□□□□ -0.08
SMPD4-219ENST00000491128 POPDC2Q9HBU9 364 aa14.53□□□□□ -0.08
SMPD4-219ENST00000491128 MFHAS1Q9Y4C4 1052 aa14.53□□□□□ -0.08
SMPD4-219ENST00000491128 SNX10Q9Y5X0 201 aa14.53□□□□□ -0.08
SMPD4-219ENST00000491128 CEP290O15078 2479 aa14.53□□□□□ -0.08
SMPD4-219ENST00000491128 CHD9Q3L8U1 2897 aa14.52□□□□□ -0.08
SMPD4-219ENST00000491128 I6L893 689 aaPredicted RBP14.52□□□□□ -0.08
SMPD4-219ENST00000491128 FGFR3P22607 806 aa14.52□□□□□ -0.08
SMPD4-219ENST00000491128 CHRNA3P32297 505 aa14.52□□□□□ -0.08
SMPD4-219ENST00000491128 DPYSL3Q14195 570 aa14.52□□□□□ -0.08
SMPD4-219ENST00000491128 MGAT5BQ3V5L5 792 aa14.52□□□□□ -0.08
SMPD4-219ENST00000491128 BSPRYQ5W0U4 402 aa14.52□□□□□ -0.08
SMPD4-219ENST00000491128 C1orf228Q6PIY5 440 aa14.52□□□□□ -0.08
SMPD4-219ENST00000491128 KCNT2Q6UVM3 1135 aa14.52□□□□□ -0.08
SMPD4-219ENST00000491128 MAATS1Q7Z4T9 603 aa14.52□□□□□ -0.08
SMPD4-219ENST00000491128 POLNQ7Z5Q5 900 aa14.52□□□□□ -0.08
SMPD4-219ENST00000491128 CMASQ8NFW8 434 aaPredicted RBP14.52□□□□□ -0.08
SMPD4-219ENST00000491128 GIPC2Q8TF65 315 aa14.52□□□□□ -0.08
SMPD4-219ENST00000491128 YME1L1Q96TA2 773 aa14.52□□□□□ -0.08
SMPD4-219ENST00000491128 TMEM121Q9BTD3 319 aa14.52□□□□□ -0.08
SMPD4-219ENST00000491128 DDX56Q9NY93 547 aaKnown RBP14.52□□□□□ -0.08
SMPD4-219ENST00000491128 KIAA0355O15063 1070 aa14.52□□□□□ -0.09
SMPD4-219ENST00000491128 PARNO95453 639 aaKnown RBP14.52□□□□□ -0.09
SMPD4-219ENST00000491128 LTFP02788 710 aa14.52□□□□□ -0.09
SMPD4-219ENST00000491128 IL4RP24394 825 aa14.52□□□□□ -0.09
SMPD4-219ENST00000491128 ECHS1P30084 290 aa14.52□□□□□ -0.09
SMPD4-219ENST00000491128 CA8P35219 290 aa14.52□□□□□ -0.09
SMPD4-219ENST00000491128 PPP1R7Q15435 360 aa14.52□□□□□ -0.09
SMPD4-219ENST00000491128 SLC25A52Q3SY17 297 aa14.52□□□□□ -0.09
SMPD4-219ENST00000491128 ZNF280DQ6N043 979 aa14.52□□□□□ -0.09
SMPD4-219ENST00000491128 C4orf50Q6ZRC1 276 aa14.52□□□□□ -0.09
SMPD4-219ENST00000491128 C7orf61Q8IZ16 206 aa14.52□□□□□ -0.09
SMPD4-219ENST00000491128 TMEM199Q8N511 208 aa14.52□□□□□ -0.09
SMPD4-219ENST00000491128 IGSF21Q96ID5 467 aa14.52□□□□□ -0.09
SMPD4-219ENST00000491128 FUT8Q9BYC5 575 aa14.52□□□□□ -0.09
SMPD4-219ENST00000491128 SFMBT1Q9UHJ3 866 aa14.52□□□□□ -0.09
SMPD4-219ENST00000491128 UTP11Q9Y3A2 253 aaKnown RBP14.52□□□□□ -0.09
SMPD4-219ENST00000491128 GTF3C5Q9Y5Q8 519 aaPredicted RBP14.52□□□□□ -0.09
SMPD4-219ENST00000491128 NR2E3Q9Y5X4 410 aa14.52□□□□□ -0.09
SMPD4-219ENST00000491128 TSC2P49815 1807 aa14.52□□□□□ -0.09
SMPD4-219ENST00000491128 DPYSL4O14531 572 aa14.51□□□□□ -0.09
SMPD4-219ENST00000491128 SYN3O14994 580 aa14.51□□□□□ -0.09
SMPD4-219ENST00000491128 MSI1O43347 362 aaKnown RBP14.51□□□□□ -0.09
SMPD4-219ENST00000491128 ERLIN1O75477 346 aa14.51□□□□□ -0.09
SMPD4-219ENST00000491128 OR1D2P34982 312 aa14.51□□□□□ -0.09
SMPD4-219ENST00000491128 KRT17Q04695 432 aa14.51□□□□□ -0.09
SMPD4-219ENST00000491128 MRPL58Q14197 206 aaKnown RBP14.51□□□□□ -0.09
SMPD4-219ENST00000491128 SMYD5Q6GMV2 418 aa14.51□□□□□ -0.09
SMPD4-219ENST00000491128 KIAA1841Q6NSI8 718 aa14.51□□□□□ -0.09
SMPD4-219ENST00000491128 ZC3H18Q86VM9 953 aaKnown RBP14.51□□□□□ -0.09
SMPD4-219ENST00000491128 ACTL9Q8TC94 416 aa14.51□□□□□ -0.09
SMPD4-219ENST00000491128 LRRC19Q9H756 370 aa14.51□□□□□ -0.09
SMPD4-219ENST00000491128 NMUR1Q9HB89 426 aa14.51□□□□□ -0.09
SMPD4-219ENST00000491128 CNGB3Q9NQW8 809 aa14.51□□□□□ -0.09
SMPD4-219ENST00000491128 DDIT4Q9NX09 232 aa14.51□□□□□ -0.09
SMPD4-219ENST00000491128 OSER1Q9NX31 292 aa14.51□□□□□ -0.09
SMPD4-219ENST00000491128 HEY1Q9Y5J3 304 aa14.51□□□□□ -0.09
SMPD4-219ENST00000491128 VWA8A3KMH1 1905 aa14.51□□□□□ -0.09
SMPD4-219ENST00000491128 C5orf42Q9H799 3197 aa14.51□□□□□ -0.09
SMPD4-219ENST00000491128 TANC1Q9C0D5 1861 aa14.51□□□□□ -0.09
SMPD4-219ENST00000491128 ABHD14A-ACY1A0A1B0GW23 586 aa14.51□□□□□ -0.09
SMPD4-219ENST00000491128 TJP3O95049 919 aa14.51□□□□□ -0.09
SMPD4-219ENST00000491128 PTPN9P43378 593 aa14.51□□□□□ -0.09
SMPD4-219ENST00000491128 RPL21P46778 160 aaKnown RBP14.51□□□□□ -0.09
SMPD4-219ENST00000491128 PLTPP55058 493 aa14.51□□□□□ -0.09
SMPD4-219ENST00000491128 OTUD4Q01804 1114 aaKnown RBP14.51□□□□□ -0.09
SMPD4-219ENST00000491128 DEUP1Q05D60 604 aa14.51□□□□□ -0.09
SMPD4-219ENST00000491128 MAPRE1Q15691 268 aaKnown RBP14.51□□□□□ -0.09
SMPD4-219ENST00000491128 CYP1B1Q16678 543 aa14.51□□□□□ -0.09
SMPD4-219ENST00000491128 GSTA5Q7RTV2 222 aa14.51□□□□□ -0.09
SMPD4-219ENST00000491128 SPRED2Q7Z698 418 aa14.51□□□□□ -0.09
SMPD4-219ENST00000491128 DCP1BQ8IZD4 617 aaKnown RBP14.51□□□□□ -0.09
SMPD4-219ENST00000491128 CENPIQ92674 756 aaPredicted RBP14.51□□□□□ -0.09
SMPD4-219ENST00000491128 ERP44Q9BS26 406 aa14.51□□□□□ -0.09
SMPD4-219ENST00000491128 PCDH18Q9HCL0 1135 aa14.51□□□□□ -0.09
SMPD4-219ENST00000491128 CYLDQ9NQC7 956 aa14.51□□□□□ -0.09
SMPD4-219ENST00000491128 ZMYND8Q9ULU4 1186 aaPredicted RBP14.51□□□□□ -0.09
SMPD4-219ENST00000491128 MAGED2Q9UNF1 606 aaPredicted RBP14.51□□□□□ -0.09
SMPD4-219ENST00000491128 AP4E1Q9UPM8 1137 aa14.51□□□□□ -0.09
SMPD4-219ENST00000491128 ZNF148Q9UQR1 794 aa14.51□□□□□ -0.09
SMPD4-219ENST00000491128 MTMR11A4FU01 709 aa14.5□□□□□ -0.09
SMPD4-219ENST00000491128 TNFRSF10BO14763 440 aa14.5□□□□□ -0.09
SMPD4-219ENST00000491128 CREB3O43889 395 aa14.5□□□□□ -0.09
SMPD4-219ENST00000491128 DAB1O75553 588 aa14.5□□□□□ -0.09
SMPD4-219ENST00000491128 IFNB1P01574 187 aa14.5□□□□□ -0.09
SMPD4-219ENST00000491128 NOS2P35228 1153 aa14.5□□□□□ -0.09
Retrieved 100 of 20,778 RNA–protein pairs in 34.1 ms