RNA–Protein interactions for RNA: ENST00000491028.1

MCF2L-230, Transcript of MCF.2 cell line derived transforming sequence like, humanhuman

TSL 4

Gene MCF2L, Length 573 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MCF2L-230ENST00000491028 JOSD2Q8TAC2 188 aa19.5■□□□□ 0.71
MCF2L-230ENST00000491028 GUCD1Q96NT3 240 aa19.5■□□□□ 0.71
MCF2L-230ENST00000491028 CDK5RAP1Q96SZ6 601 aaKnown RBP19.5■□□□□ 0.71
MCF2L-230ENST00000491028 OLA1Q9NTK5 396 aaKnown RBP19.5■□□□□ 0.71
MCF2L-230ENST00000491028 CLDND1Q9NY35 253 aa19.5■□□□□ 0.71
MCF2L-230ENST00000491028 RRN3Q9NYV6 651 aa19.5■□□□□ 0.71
MCF2L-230ENST00000491028 FASTKD2Q9NYY8 710 aaKnown RBP eCLIP19.5■□□□□ 0.71
MCF2L-230ENST00000491028 DNMT3BQ9UBC3 853 aaKnown RBP19.5■□□□□ 0.71
MCF2L-230ENST00000491028 CHORDC1Q9UHD1 332 aaPredicted RBP19.5■□□□□ 0.71
MCF2L-230ENST00000491028 ANAPC7Q9UJX3 599 aa19.5■□□□□ 0.71
MCF2L-230ENST00000491028 ANAPC1Q9H1A4 1944 aa19.5■□□□□ 0.71
MCF2L-230ENST00000491028 A0A0U1RQJ8 604 aa19.49■□□□□ 0.71
MCF2L-230ENST00000491028 ZNF840PA6NDX5 716 aa19.49■□□□□ 0.71
MCF2L-230ENST00000491028 C2CD4BA6NLJ0 364 aa19.49■□□□□ 0.71
MCF2L-230ENST00000491028 DPYSL4O14531 572 aa19.49■□□□□ 0.71
MCF2L-230ENST00000491028 ZNF197O14709 1029 aa19.49■□□□□ 0.71
MCF2L-230ENST00000491028 CAPN9O14815 690 aa19.49■□□□□ 0.71
MCF2L-230ENST00000491028 TBX10O75333 385 aa19.49■□□□□ 0.71
MCF2L-230ENST00000491028 GRAP2O75791 330 aa19.49■□□□□ 0.71
MCF2L-230ENST00000491028 GJB6O95452 261 aa19.49■□□□□ 0.71
MCF2L-230ENST00000491028 RHOP08100 348 aa19.49■□□□□ 0.71
MCF2L-230ENST00000491028 RALAP11233 206 aa19.49■□□□□ 0.71
MCF2L-230ENST00000491028 FOSL2P15408 326 aa19.49■□□□□ 0.71
MCF2L-230ENST00000491028 DESP17661 470 aa19.49■□□□□ 0.71
MCF2L-230ENST00000491028 GPD1P21695 349 aa19.49■□□□□ 0.71
MCF2L-230ENST00000491028 GABRR2P28476 465 aa19.49■□□□□ 0.71
MCF2L-230ENST00000491028 NOS2P35228 1153 aa19.49■□□□□ 0.71
MCF2L-230ENST00000491028 RFC1P35251 1148 aaPredicted RBP19.49■□□□□ 0.71
MCF2L-230ENST00000491028 FLT3P36888 993 aa19.49■□□□□ 0.71
MCF2L-230ENST00000491028 ARHGAP25P42331 645 aa19.49■□□□□ 0.71
MCF2L-230ENST00000491028 MATKP42679 507 aa19.49■□□□□ 0.71
MCF2L-230ENST00000491028 RPL7AP62424 266 aaKnown RBP19.49■□□□□ 0.71
MCF2L-230ENST00000491028 ITIH3Q06033 890 aa19.49■□□□□ 0.71
MCF2L-230ENST00000491028 SYCE2Q6PIF2 218 aa19.49■□□□□ 0.71
MCF2L-230ENST00000491028 TMC5Q6UXY8 1006 aa19.49■□□□□ 0.71
MCF2L-230ENST00000491028 GPR149Q86SP6 731 aa19.49■□□□□ 0.71
MCF2L-230ENST00000491028 TADA2BQ86TJ2 420 aa19.49■□□□□ 0.71
MCF2L-230ENST00000491028 REXO1L1PQ8IX06 675 aa19.49■□□□□ 0.71
MCF2L-230ENST00000491028 DEFB106AQ8N104 65 aa19.49■□□□□ 0.71
MCF2L-230ENST00000491028 RNF10Q8N5U6 811 aaKnown RBP19.49■□□□□ 0.71
MCF2L-230ENST00000491028 C12orf76Q8N812 135 aaPredicted RBP19.49■□□□□ 0.71
MCF2L-230ENST00000491028 ATRIPQ8WXE1 791 aa19.49■□□□□ 0.71
MCF2L-230ENST00000491028 DDX23Q9BUQ8 820 aaKnown RBP19.49■□□□□ 0.71
MCF2L-230ENST00000491028 OSGEPQ9NPF4 335 aa19.49■□□□□ 0.71
MCF2L-230ENST00000491028 LZTFL1Q9NQ48 299 aa19.49■□□□□ 0.71
MCF2L-230ENST00000491028 HCFC1R1Q9NWW0 138 aa19.49■□□□□ 0.71
MCF2L-230ENST00000491028 CLEC1BQ9P126 229 aa19.49■□□□□ 0.71
MCF2L-230ENST00000491028 STAP1Q9ULZ2 295 aa19.49■□□□□ 0.71
MCF2L-230ENST00000491028 COG5Q9UP83 839 aa19.49■□□□□ 0.71
MCF2L-230ENST00000491028 FYNP06241 537 aa19.48■□□□□ 0.71
MCF2L-230ENST00000491028 MYL4P12829 197 aa19.48■□□□□ 0.71
MCF2L-230ENST00000491028 NCAM1P13591 858 aa19.48■□□□□ 0.71
MCF2L-230ENST00000491028 PFKLP17858 780 aa19.48■□□□□ 0.71
MCF2L-230ENST00000491028 NOP2P46087 812 aaKnown RBP19.48■□□□□ 0.71
MCF2L-230ENST00000491028 RNASE9P60153 205 aaKnown RBP19.48■□□□□ 0.71
MCF2L-230ENST00000491028 MSANTD2Q6P1R3 559 aa19.48■□□□□ 0.71
MCF2L-230ENST00000491028 GAREM2Q75VX8 874 aa19.48■□□□□ 0.71
MCF2L-230ENST00000491028 GRASPQ7Z6J2 395 aaPredicted RBP19.48■□□□□ 0.71
MCF2L-230ENST00000491028 TMEM150AQ86TG1 271 aa19.48■□□□□ 0.71
MCF2L-230ENST00000491028 EMC1Q8N766 993 aa19.48■□□□□ 0.71
MCF2L-230ENST00000491028 RNF139Q8WU17 664 aa19.48■□□□□ 0.71
MCF2L-230ENST00000491028 RXFP2Q8WXD0 754 aa19.48■□□□□ 0.71
MCF2L-230ENST00000491028 MRPS31Q92665 395 aaKnown RBP19.48■□□□□ 0.71
MCF2L-230ENST00000491028 MTPAPQ9NVV4 582 aaKnown RBP eCLIP19.48■□□□□ 0.71
MCF2L-230ENST00000491028 OSER1Q9NX31 292 aa19.48■□□□□ 0.71
MCF2L-230ENST00000491028 MTMR10Q9NXD2 777 aa19.48■□□□□ 0.71
MCF2L-230ENST00000491028 TRIM10Q9UDY6 481 aa19.48■□□□□ 0.71
MCF2L-230ENST00000491028 IP6K2Q9UHH9 426 aa19.48■□□□□ 0.71
MCF2L-230ENST00000491028 DUSP10Q9Y6W6 482 aa19.48■□□□□ 0.71
MCF2L-230ENST00000491028 CDH23Q9H251 3354 aa19.48■□□□□ 0.71
MCF2L-230ENST00000491028 SOBPA7XYQ1 873 aa19.47■□□□□ 0.71
MCF2L-230ENST00000491028 MYO1FO00160 1098 aa19.47■□□□□ 0.71
MCF2L-230ENST00000491028 RARGP13631 454 aa19.47■□□□□ 0.71
MCF2L-230ENST00000491028 PDGFRAP16234 1089 aa19.47■□□□□ 0.71
MCF2L-230ENST00000491028 SDC4P31431 198 aa19.47■□□□□ 0.71
MCF2L-230ENST00000491028 PTPN9P43378 593 aa19.47■□□□□ 0.71
MCF2L-230ENST00000491028 PGFP49763 221 aa19.47■□□□□ 0.71
MCF2L-230ENST00000491028 ZNF143P52747 638 aaPredicted RBP19.47■□□□□ 0.71
MCF2L-230ENST00000491028 DCAF6Q58WW2 860 aa19.47■□□□□ 0.71
MCF2L-230ENST00000491028 CES5AQ6NT32 575 aa19.47■□□□□ 0.71
MCF2L-230ENST00000491028 TRNP1Q6NT89 227 aa19.47■□□□□ 0.71
MCF2L-230ENST00000491028 EDEM1Q92611 657 aa19.47■□□□□ 0.71
MCF2L-230ENST00000491028 MSLNLQ96KJ4 702 aa19.47■□□□□ 0.71
MCF2L-230ENST00000491028 CNPY3Q9BT09 278 aa19.47■□□□□ 0.71
MCF2L-230ENST00000491028 ADAM7Q9H2U9 754 aa19.47■□□□□ 0.71
MCF2L-230ENST00000491028 TMEM51Q9NW97 253 aa19.47■□□□□ 0.71
MCF2L-230ENST00000491028 ZMYM5Q9UJ78 669 aa19.47■□□□□ 0.71
MCF2L-230ENST00000491028 SALL4Q9UJQ4 1053 aa19.47■□□□□ 0.71
MCF2L-230ENST00000491028 GUCA1BQ9UMX6 200 aa19.47■□□□□ 0.71
MCF2L-230ENST00000491028 NAALADL1Q9UQQ1 740 aa19.47■□□□□ 0.71
MCF2L-230ENST00000491028 NOTCH4Q99466 2003 aa19.47■□□□□ 0.71
MCF2L-230ENST00000491028 CLUHO75153 1309 aa19.47■□□□□ 0.71
MCF2L-230ENST00000491028 A0A1W2PRU2 124 aa19.46■□□□□ 0.71
MCF2L-230ENST00000491028 MACROD2A1Z1Q3 448 aa19.46■□□□□ 0.71
MCF2L-230ENST00000491028 BUB1O43683 1085 aa19.46■□□□□ 0.71
MCF2L-230ENST00000491028 TLR5O60602 858 aa19.46■□□□□ 0.71
MCF2L-230ENST00000491028 ABL1P00519 1130 aa19.46■□□□□ 0.71
MCF2L-230ENST00000491028 PSMA2P25787 234 aa19.46■□□□□ 0.71
MCF2L-230ENST00000491028 DDX6P26196 483 aaKnown RBP eCLIP19.46■□□□□ 0.71
MCF2L-230ENST00000491028 LTBRP36941 435 aa19.46■□□□□ 0.71
Retrieved 100 of 20,778 RNA–protein pairs in 34.8 ms