RNA–Protein interactions for RNA: ENST00000490831.1

COL27A1-206, Transcript of collagen type XXVII alpha 1 chain, humanhuman

TSL 3

Gene COL27A1, Length 666 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL27A1-206ENST00000490831 GPT2Q8TD30 523 aa16■□□□□ 0.15
COL27A1-206ENST00000490831 EZH1Q92800 747 aaPredicted RBP16■□□□□ 0.15
COL27A1-206ENST00000490831 WBP2Q969T9 261 aa16■□□□□ 0.15
COL27A1-206ENST00000490831 CDK5RAP1Q96SZ6 601 aaKnown RBP16■□□□□ 0.15
COL27A1-206ENST00000490831 ZSWIM1Q9BR11 485 aa16■□□□□ 0.15
COL27A1-206ENST00000490831 NACA2Q9H009 215 aa16■□□□□ 0.15
COL27A1-206ENST00000490831 DNMT3LQ9UJW3 386 aa16■□□□□ 0.15
COL27A1-206ENST00000490831 NAGPAQ9UK23 515 aa16■□□□□ 0.15
COL27A1-206ENST00000490831 WDR3Q9UNX4 943 aaKnown RBP eCLIP16■□□□□ 0.15
COL27A1-206ENST00000490831 SH3BP1Q9Y3L3 701 aa16■□□□□ 0.15
COL27A1-206ENST00000490831 FAM186AA6NE01 2351 aa16■□□□□ 0.15
COL27A1-206ENST00000490831 ZBED1O96006 694 aa15.99■□□□□ 0.15
COL27A1-206ENST00000490831 ADH1CP00326 375 aa15.99■□□□□ 0.15
COL27A1-206ENST00000490831 RALAP11233 206 aa15.99■□□□□ 0.15
COL27A1-206ENST00000490831 TKTL1P51854 596 aa15.99■□□□□ 0.15
COL27A1-206ENST00000490831 TRIM65Q6PJ69 517 aa15.99■□□□□ 0.15
COL27A1-206ENST00000490831 ENOSF1Q7L5Y1 443 aa15.99■□□□□ 0.15
COL27A1-206ENST00000490831 RBBP8NLQ8NC74 664 aaPredicted RBP15.99■□□□□ 0.15
COL27A1-206ENST00000490831 SLC35F5Q8WV83 523 aa15.99■□□□□ 0.15
COL27A1-206ENST00000490831 FAM81BQ96LP2 452 aa15.99■□□□□ 0.15
COL27A1-206ENST00000490831 C2orf42Q9NWW7 574 aa15.99■□□□□ 0.15
COL27A1-206ENST00000490831 A0A0A0MRY4 1105 aa15.98■□□□□ 0.15
COL27A1-206ENST00000490831 SCAMP3O14828 347 aaKnown RBP15.98■□□□□ 0.15
COL27A1-206ENST00000490831 HOXC11O43248 304 aaPredicted RBP15.98■□□□□ 0.15
COL27A1-206ENST00000490831 ATG13O75143 517 aa15.98■□□□□ 0.15
COL27A1-206ENST00000490831 LMNAP02545 664 aaKnown RBP15.98■□□□□ 0.15
COL27A1-206ENST00000490831 PTPRZ1P23471 2315 aaPredicted RBP15.98■□□□□ 0.15
COL27A1-206ENST00000490831 GOLGA8FQ08AF8 430 aa15.98■□□□□ 0.15
COL27A1-206ENST00000490831 GOLGA8DPQ0D2H9 430 aa15.98■□□□□ 0.15
COL27A1-206ENST00000490831 MEA1Q16626 185 aa15.98■□□□□ 0.15
COL27A1-206ENST00000490831 C10orf120Q5SQS8 335 aa15.98■□□□□ 0.15
COL27A1-206ENST00000490831 PKN3Q6P5Z2 889 aa15.98■□□□□ 0.15
COL27A1-206ENST00000490831 GBP6Q6ZN66 633 aa15.98■□□□□ 0.15
COL27A1-206ENST00000490831 Q6ZNB5 142 aa15.98■□□□□ 0.15
COL27A1-206ENST00000490831 FAM114A1Q8IWE2 563 aa15.98■□□□□ 0.15
COL27A1-206ENST00000490831 BBS7Q8IWZ6 715 aa15.98■□□□□ 0.15
COL27A1-206ENST00000490831 SUMF1Q8NBK3 374 aa15.98■□□□□ 0.15
COL27A1-206ENST00000490831 UBA3Q8TBC4 463 aa15.98■□□□□ 0.15
COL27A1-206ENST00000490831 ATRIPQ8WXE1 791 aa15.98■□□□□ 0.15
COL27A1-206ENST00000490831 ULBP1Q9BZM6 244 aa15.98■□□□□ 0.15
COL27A1-206ENST00000490831 UBE2TQ9NPD8 197 aaPredicted RBP15.98■□□□□ 0.15
COL27A1-206ENST00000490831 OTOGLQ3ZCN5 2332 aa15.97■□□□□ 0.15
COL27A1-206ENST00000490831 RNF40O75150 1001 aa15.97■□□□□ 0.15
COL27A1-206ENST00000490831 GABBR2O75899 941 aa15.97■□□□□ 0.15
COL27A1-206ENST00000490831 CHRM1P11229 460 aaPredicted RBP15.97■□□□□ 0.15
COL27A1-206ENST00000490831 ADH5P11766 374 aa15.97■□□□□ 0.15
COL27A1-206ENST00000490831 PRKCSHP14314 528 aaPredicted RBP15.97■□□□□ 0.15
COL27A1-206ENST00000490831 SLC9A1P19634 815 aa15.97■□□□□ 0.15
COL27A1-206ENST00000490831 BRD2P25440 801 aaKnown RBP15.97■□□□□ 0.15
COL27A1-206ENST00000490831 YWHAGP61981 247 aaKnown RBP eCLIP15.97■□□□□ 0.15
COL27A1-206ENST00000490831 GAD2Q05329 585 aa15.97■□□□□ 0.15
COL27A1-206ENST00000490831 MAN2A1Q16706 1144 aa15.97■□□□□ 0.15
COL27A1-206ENST00000490831 TPD52L1Q16890 204 aaPredicted RBP15.97■□□□□ 0.15
COL27A1-206ENST00000490831 EXOC3L4Q17RC7 722 aa15.97■□□□□ 0.15
COL27A1-206ENST00000490831 LY6G5CQ5SRR4 150 aa15.97■□□□□ 0.15
COL27A1-206ENST00000490831 ETFBKMTQ8IXQ9 262 aa15.97■□□□□ 0.15
COL27A1-206ENST00000490831 CCDC26Q8TAB7 109 aa15.97■□□□□ 0.15
COL27A1-206ENST00000490831 HSFY1Q96LI6 401 aa15.97■□□□□ 0.15
COL27A1-206ENST00000490831 CRACR2AQ9BSW2 395 aa15.97■□□□□ 0.15
COL27A1-206ENST00000490831 EPC1Q9H2F5 836 aa15.97■□□□□ 0.15
COL27A1-206ENST00000490831 LRRC4Q9HBW1 653 aa15.97■□□□□ 0.15
COL27A1-206ENST00000490831 CNGB3Q9NQW8 809 aa15.97■□□□□ 0.15
COL27A1-206ENST00000490831 SPHK2Q9NRA0 654 aa15.97■□□□□ 0.15
COL27A1-206ENST00000490831 APEX2Q9UBZ4 518 aa15.97■□□□□ 0.15
COL27A1-206ENST00000490831 NUDT5Q9UKK9 219 aa15.97■□□□□ 0.15
COL27A1-206ENST00000490831 GPR179Q6PRD1 2367 aa15.97■□□□□ 0.15
COL27A1-206ENST00000490831 KIAA1549LQ6ZVL6 1849 aa15.96■□□□□ 0.15
COL27A1-206ENST00000490831 MYOFQ9NZM1 2061 aa15.96■□□□□ 0.15
COL27A1-206ENST00000490831 GVINP1Q7Z2Y8 2422 aa15.96■□□□□ 0.15
COL27A1-206ENST00000490831 GOLGA6L22H0YM25 854 aa15.96■□□□□ 0.15
COL27A1-206ENST00000490831 K7EQS6 105 aa15.96■□□□□ 0.15
COL27A1-206ENST00000490831 MDM4O15151 490 aa15.96■□□□□ 0.15
COL27A1-206ENST00000490831 STC2O76061 302 aa15.96■□□□□ 0.15
COL27A1-206ENST00000490831 IRF1P10914 325 aa15.96■□□□□ 0.15
COL27A1-206ENST00000490831 PON1P27169 355 aa15.96■□□□□ 0.15
COL27A1-206ENST00000490831 MTIF2P46199 727 aaKnown RBP15.96■□□□□ 0.15
COL27A1-206ENST00000490831 RPL34P49207 117 aaKnown RBP15.96■□□□□ 0.15
COL27A1-206ENST00000490831 MFAP3P55082 362 aa15.96■□□□□ 0.15
COL27A1-206ENST00000490831 COG7P83436 770 aa15.96■□□□□ 0.15
COL27A1-206ENST00000490831 ADIGQ0VDE8 80 aa15.96■□□□□ 0.15
COL27A1-206ENST00000490831 MIIPQ5JXC2 388 aa15.96■□□□□ 0.15
COL27A1-206ENST00000490831 PMF1Q6P1K2 205 aa15.96■□□□□ 0.15
COL27A1-206ENST00000490831 C12orf40Q86WS4 652 aa15.96■□□□□ 0.15
COL27A1-206ENST00000490831 PHTF2Q8N3S3 785 aa15.96■□□□□ 0.15
COL27A1-206ENST00000490831 SECISBP2LQ93073 1101 aaKnown RBP15.96■□□□□ 0.15
COL27A1-206ENST00000490831 MARK1Q9P0L2 795 aa15.96■□□□□ 0.15
COL27A1-206ENST00000490831 LSM7Q9UK45 103 aaKnown RBP15.96■□□□□ 0.15
COL27A1-206ENST00000490831 EP300Q09472 2414 aaPredicted RBP15.95■□□□□ 0.14
COL27A1-206ENST00000490831 CCDC163A0A0D9SF12 145 aa15.95■□□□□ 0.14
COL27A1-206ENST00000490831 PALM2-AKAP2B1ALY0 433 aaPredicted RBP15.95■□□□□ 0.14
COL27A1-206ENST00000490831 M0QYV0 167 aa15.95■□□□□ 0.14
COL27A1-206ENST00000490831 SLC6A11P48066 632 aa15.95■□□□□ 0.14
COL27A1-206ENST00000490831 DAOAP59103 153 aa15.95■□□□□ 0.14
COL27A1-206ENST00000490831 MESP2Q0VG99 397 aa15.95■□□□□ 0.14
COL27A1-206ENST00000490831 DPY19L2P1Q6NXN4 242 aa15.95■□□□□ 0.14
COL27A1-206ENST00000490831 SYT13Q7L8C5 426 aa15.95■□□□□ 0.14
COL27A1-206ENST00000490831 LONP2Q86WA8 852 aa15.95■□□□□ 0.14
COL27A1-206ENST00000490831 TMEM25Q86YD3 366 aa15.95■□□□□ 0.14
COL27A1-206ENST00000490831 CREBRFQ8IUR6 639 aa15.95■□□□□ 0.14
COL27A1-206ENST00000490831 ENOX1Q8TC92 643 aaKnown RBP15.95■□□□□ 0.14
Retrieved 100 of 20,778 RNA–protein pairs in 19.3 ms