RNA–Protein interactions for RNA: ENST00000490796.1

SREBF1-216, Transcript of sterol regulatory element binding transcription factor 1, humanhuman

TSL 2

Gene SREBF1, Length 698 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SREBF1-216ENST00000490796 SGK1O00141 431 aa20.81■□□□□ 0.92
SREBF1-216ENST00000490796 ZBTB24O43167 697 aaPredicted RBP20.81■□□□□ 0.92
SREBF1-216ENST00000490796 HOXC11O43248 304 aaPredicted RBP20.81■□□□□ 0.92
SREBF1-216ENST00000490796 TULP3O75386 442 aa20.81■□□□□ 0.92
SREBF1-216ENST00000490796 INCA1Q0VD86 236 aa20.81■□□□□ 0.92
SREBF1-216ENST00000490796 C1orf220Q5T0J3 134 aa20.81■□□□□ 0.92
SREBF1-216ENST00000490796 PMS2CLQ68D20 193 aa20.81■□□□□ 0.92
SREBF1-216ENST00000490796 TCEAL6Q6IPX3 200 aa20.81■□□□□ 0.92
SREBF1-216ENST00000490796 TMEM92Q6UXU6 159 aa20.81■□□□□ 0.92
SREBF1-216ENST00000490796 TMEM25Q86YD3 366 aa20.81■□□□□ 0.92
SREBF1-216ENST00000490796 SFTPA1Q8IWL2 248 aa20.81■□□□□ 0.92
SREBF1-216ENST00000490796 HMGB4Q8WW32 186 aa20.81■□□□□ 0.92
SREBF1-216ENST00000490796 TCEAL3Q969E4 200 aa20.81■□□□□ 0.92
SREBF1-216ENST00000490796 XPO6Q96QU8 1125 aaKnown RBP20.81■□□□□ 0.92
SREBF1-216ENST00000490796 EDEM2Q9BV94 578 aa20.81■□□□□ 0.92
SREBF1-216ENST00000490796 SCML2Q9UQR0 700 aa20.81■□□□□ 0.92
SREBF1-216ENST00000490796 PCDHA5Q9Y5H7 936 aa20.81■□□□□ 0.92
SREBF1-216ENST00000490796 A0A0A0MRY4 1105 aa20.8■□□□□ 0.92
SREBF1-216ENST00000490796 ANTXRLA6NF34 631 aa20.8■□□□□ 0.92
SREBF1-216ENST00000490796 KHNYNO15037 678 aaKnown RBP20.8■□□□□ 0.92
SREBF1-216ENST00000490796 TBX18O95935 607 aa20.8■□□□□ 0.92
SREBF1-216ENST00000490796 KIR2DL1P43626 348 aaPredicted RBP20.8■□□□□ 0.92
SREBF1-216ENST00000490796 ENPEPQ07075 957 aa20.8■□□□□ 0.92
SREBF1-216ENST00000490796 PPP3CAQ08209 521 aa20.8■□□□□ 0.92
SREBF1-216ENST00000490796 MESP2Q0VG99 397 aa20.8■□□□□ 0.92
SREBF1-216ENST00000490796 C10orf76Q5T2E6 689 aa20.8■□□□□ 0.92
SREBF1-216ENST00000490796 GRAMD4Q6IC98 578 aa20.8■□□□□ 0.92
SREBF1-216ENST00000490796 SDE2Q6IQ49 451 aa20.8■□□□□ 0.92
SREBF1-216ENST00000490796 CLEC20AQ6ZU45 233 aa20.8■□□□□ 0.92
SREBF1-216ENST00000490796 HTR3DQ70Z44 454 aa20.8■□□□□ 0.92
SREBF1-216ENST00000490796 LPCAT2Q7L5N7 544 aa20.8■□□□□ 0.92
SREBF1-216ENST00000490796 TADA2BQ86TJ2 420 aa20.8■□□□□ 0.92
SREBF1-216ENST00000490796 ZNF513Q8N8E2 541 aaPredicted RBP20.8■□□□□ 0.92
SREBF1-216ENST00000490796 TWNKQ96RR1 684 aa20.8■□□□□ 0.92
SREBF1-216ENST00000490796 DUSP9Q99956 384 aaKnown RBP20.8■□□□□ 0.92
SREBF1-216ENST00000490796 TMEM8AQ9HCN3 771 aa20.8■□□□□ 0.92
SREBF1-216ENST00000490796 PNPLA8Q9NP80 782 aa20.8■□□□□ 0.92
SREBF1-216ENST00000490796 ZDHHC4Q9NPG8 344 aa20.8■□□□□ 0.92
SREBF1-216ENST00000490796 ZDHHC9Q9Y397 364 aa20.8■□□□□ 0.92
SREBF1-216ENST00000490796 KIAA1549LQ6ZVL6 1849 aa20.8■□□□□ 0.92
SREBF1-216ENST00000490796 TCRBV21S2A2A0A5A6 115 aa20.79■□□□□ 0.92
SREBF1-216ENST00000490796 CYP26A1O43174 497 aa20.79■□□□□ 0.92
SREBF1-216ENST00000490796 STX10O60499 249 aa20.79■□□□□ 0.92
SREBF1-216ENST00000490796 ZNF202O95125 648 aa20.79■□□□□ 0.92
SREBF1-216ENST00000490796 RARGP13631 454 aa20.79■□□□□ 0.92
SREBF1-216ENST00000490796 BCKDHBP21953 392 aa20.79■□□□□ 0.92
SREBF1-216ENST00000490796 GTF2H1P32780 548 aa20.79■□□□□ 0.92
SREBF1-216ENST00000490796 C10orf120Q5SQS8 335 aa20.79■□□□□ 0.92
SREBF1-216ENST00000490796 DAB2IPQ5VWQ8 1189 aa20.79■□□□□ 0.92
SREBF1-216ENST00000490796 KRT39Q6A163 491 aa20.79■□□□□ 0.92
SREBF1-216ENST00000490796 ETFBKMTQ8IXQ9 262 aa20.79■□□□□ 0.92
SREBF1-216ENST00000490796 TTC39CQ8N584 583 aa20.79■□□□□ 0.92
SREBF1-216ENST00000490796 KCNV2Q8TDN2 545 aa20.79■□□□□ 0.92
SREBF1-216ENST00000490796 HEXIM2Q96MH2 286 aaKnown RBP20.79■□□□□ 0.92
SREBF1-216ENST00000490796 BBS2Q9BXC9 721 aa20.79■□□□□ 0.92
SREBF1-216ENST00000490796 KLF16Q9BXK1 252 aaPredicted RBP20.79■□□□□ 0.92
SREBF1-216ENST00000490796 APOBEC3GQ9HC16 384 aaKnown RBP20.79■□□□□ 0.92
SREBF1-216ENST00000490796 CYLDQ9NQC7 956 aa20.79■□□□□ 0.92
SREBF1-216ENST00000490796 DNAJC17Q9NVM6 304 aaKnown RBP20.79■□□□□ 0.92
SREBF1-216ENST00000490796 WDR35Q9P2L0 1181 aa20.79■□□□□ 0.92
SREBF1-216ENST00000490796 NAGPAQ9UK23 515 aa20.79■□□□□ 0.92
SREBF1-216ENST00000490796 CHD8Q9HCK8 2581 aa20.78■□□□□ 0.92
SREBF1-216ENST00000490796 MYO18AQ92614 2054 aaKnown RBP20.78■□□□□ 0.92
SREBF1-216ENST00000490796 THADAQ6YHU6 1953 aa20.78■□□□□ 0.92
SREBF1-216ENST00000490796 A0A1W2PQH9 124 aa20.78■□□□□ 0.92
SREBF1-216ENST00000490796 NEDD8-MDP1E9PL57 170 aa20.78■□□□□ 0.92
SREBF1-216ENST00000490796 CETN3O15182 167 aa20.78■□□□□ 0.92
SREBF1-216ENST00000490796 CILPO75339 1184 aa20.78■□□□□ 0.92
SREBF1-216ENST00000490796 EPB41P11171 864 aaKnown RBP20.78■□□□□ 0.92
SREBF1-216ENST00000490796 RALAP11233 206 aa20.78■□□□□ 0.92
SREBF1-216ENST00000490796 PLA2G4AP47712 749 aa20.78■□□□□ 0.92
SREBF1-216ENST00000490796 PGFP49763 221 aa20.78■□□□□ 0.92
SREBF1-216ENST00000490796 PSEN1P49768 467 aa20.78■□□□□ 0.92
SREBF1-216ENST00000490796 ZNF394Q53GI3 561 aa20.78■□□□□ 0.92
SREBF1-216ENST00000490796 TPGS1Q6ZTW0 290 aa20.78■□□□□ 0.92
SREBF1-216ENST00000490796 GPRIN1Q7Z2K8 1008 aa20.78■□□□□ 0.92
SREBF1-216ENST00000490796 TERB1Q8NA31 727 aa20.78■□□□□ 0.92
SREBF1-216ENST00000490796 RLN3Q8WXF3 142 aa20.78■□□□□ 0.92
SREBF1-216ENST00000490796 PIGKQ92643 395 aa20.78■□□□□ 0.92
SREBF1-216ENST00000490796 WBP2Q969T9 261 aa20.78■□□□□ 0.92
SREBF1-216ENST00000490796 DNMT3LQ9UJW3 386 aa20.78■□□□□ 0.92
SREBF1-216ENST00000490796 GON4LQ3T8J9 2241 aa20.77■□□□□ 0.92
SREBF1-216ENST00000490796 GOLGA6L4A6NEF3 574 aa20.77■□□□□ 0.92
SREBF1-216ENST00000490796 HNRNPLP14866 589 aaKnown RBP eCLIP20.77■□□□□ 0.92
SREBF1-216ENST00000490796 P2RY2P41231 377 aa20.77■□□□□ 0.92
SREBF1-216ENST00000490796 MXI1P50539 228 aa20.77■□□□□ 0.92
SREBF1-216ENST00000490796 SLC8A3P57103 927 aa20.77■□□□□ 0.92
SREBF1-216ENST00000490796 EDRF1Q3B7T1 1238 aa20.77■□□□□ 0.92
SREBF1-216ENST00000490796 PHTF2Q8N3S3 785 aa20.77■□□□□ 0.92
SREBF1-216ENST00000490796 OLIG1Q8TAK6 271 aa20.77■□□□□ 0.92
SREBF1-216ENST00000490796 CDK5RAP1Q96SZ6 601 aaKnown RBP20.77■□□□□ 0.92
SREBF1-216ENST00000490796 DUSP16Q9BY84 665 aa20.77■□□□□ 0.92
SREBF1-216ENST00000490796 GOLPH3LQ9H4A5 285 aa20.77■□□□□ 0.92
SREBF1-216ENST00000490796 RMND1Q9NWS8 449 aa20.77■□□□□ 0.92
SREBF1-216ENST00000490796 C4orf47A7E2U8 309 aa20.76■□□□□ 0.91
SREBF1-216ENST00000490796 HHLA1C9JL84 531 aa20.76■□□□□ 0.91
SREBF1-216ENST00000490796 ADAM23O75077 832 aa20.76■□□□□ 0.91
SREBF1-216ENST00000490796 HOXB2P14652 356 aa20.76■□□□□ 0.91
SREBF1-216ENST00000490796 TYRP14679 529 aa20.76■□□□□ 0.91
SREBF1-216ENST00000490796 NTSR1P30989 418 aa20.76■□□□□ 0.91
Retrieved 100 of 20,778 RNA–protein pairs in 17.3 ms