RNA–Protein interactions for RNA: ENST00000490399.5

PRPF4B-207, Transcript of pre-mRNA processing factor 4B, humanhuman

TSL 2

Gene PRPF4B, Length 576 nt, Biotype processed transcript, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF4B-207ENST00000490399 RAB11FIP4Q86YS3 637 aa5.28□□□□□ -1.56
PRPF4B-207ENST00000490399 BOLLQ8N9W6 283 aaKnown RBP5.28□□□□□ -1.56
PRPF4B-207ENST00000490399 FAM98AQ8NCA5 519 aaKnown RBP5.28□□□□□ -1.56
PRPF4B-207ENST00000490399 MBD3L2Q8NHZ7 208 aaPredicted RBP5.28□□□□□ -1.56
PRPF4B-207ENST00000490399 CYP2W1Q8TAV3 490 aa5.28□□□□□ -1.56
PRPF4B-207ENST00000490399 TIMP4Q99727 224 aa5.28□□□□□ -1.56
PRPF4B-207ENST00000490399 THAP7Q9BT49 309 aaPredicted RBP5.28□□□□□ -1.56
PRPF4B-207ENST00000490399 STK33Q9BYT3 514 aa5.28□□□□□ -1.56
PRPF4B-207ENST00000490399 WDR12Q9GZL7 423 aaKnown RBP5.28□□□□□ -1.56
PRPF4B-207ENST00000490399 TMOD4Q9NZQ9 345 aa5.28□□□□□ -1.56
PRPF4B-207ENST00000490399 SH3BP4Q9P0V3 963 aa5.28□□□□□ -1.56
PRPF4B-207ENST00000490399 NKX1-2Q9UD57 310 aaPredicted RBP5.28□□□□□ -1.56
PRPF4B-207ENST00000490399 AMFRQ9UKV5 643 aa5.28□□□□□ -1.56
PRPF4B-207ENST00000490399 LRCH1Q9Y2L9 728 aa5.28□□□□□ -1.56
PRPF4B-207ENST00000490399 AQP12BA6NM10 295 aa5.27□□□□□ -1.57
PRPF4B-207ENST00000490399 F5H423 210 aaPredicted RBP5.27□□□□□ -1.57
PRPF4B-207ENST00000490399 HNRNPDLO14979 420 aaKnown RBP5.27□□□□□ -1.57
PRPF4B-207ENST00000490399 ADAMTS3O15072 1205 aa5.27□□□□□ -1.57
PRPF4B-207ENST00000490399 ZSCAN9O15535 394 aaPredicted RBP5.27□□□□□ -1.57
PRPF4B-207ENST00000490399 CA12O43570 354 aa5.27□□□□□ -1.57
PRPF4B-207ENST00000490399 TJP3O95049 919 aa5.27□□□□□ -1.57
PRPF4B-207ENST00000490399 LDHAP00338 332 aaKnown RBP5.27□□□□□ -1.57
PRPF4B-207ENST00000490399 FGAP02671 866 aa5.27□□□□□ -1.57
PRPF4B-207ENST00000490399 SRGAP2BP0DMP2 458 aa5.27□□□□□ -1.57
PRPF4B-207ENST00000490399 PBX1P40424 430 aa5.27□□□□□ -1.57
PRPF4B-207ENST00000490399 DIO1P49895 249 aa5.27□□□□□ -1.57
PRPF4B-207ENST00000490399 EIF4A1P60842 406 aaKnown RBP5.27□□□□□ -1.57
PRPF4B-207ENST00000490399 SUMO2P61956 95 aaKnown RBP5.27□□□□□ -1.57
PRPF4B-207ENST00000490399 MORC3Q14149 939 aa5.27□□□□□ -1.57
PRPF4B-207ENST00000490399 MAPKAPK3Q16644 382 aa5.27□□□□□ -1.57
PRPF4B-207ENST00000490399 TBC1D25Q3MII6 688 aa5.27□□□□□ -1.57
PRPF4B-207ENST00000490399 GRHL2Q6ISB3 625 aa5.27□□□□□ -1.57
PRPF4B-207ENST00000490399 USP17L6PQ6QN14 398 aa5.27□□□□□ -1.57
PRPF4B-207ENST00000490399 PTCHD4Q6ZW05 846 aa5.27□□□□□ -1.57
PRPF4B-207ENST00000490399 SUN3Q8TAQ9 357 aa5.27□□□□□ -1.57
PRPF4B-207ENST00000490399 POF1BQ8WVV4 589 aa5.27□□□□□ -1.57
PRPF4B-207ENST00000490399 GRAMD1AQ96CP6 724 aa5.27□□□□□ -1.57
PRPF4B-207ENST00000490399 PRR11Q96HE9 360 aaPredicted RBP5.27□□□□□ -1.57
PRPF4B-207ENST00000490399 TMEM41AQ96HV5 264 aa5.27□□□□□ -1.57
PRPF4B-207ENST00000490399 BBC3Q96PG8 261 aaPredicted RBP5.27□□□□□ -1.57
PRPF4B-207ENST00000490399 EIF2AQ9BY44 585 aaKnown RBP5.27□□□□□ -1.57
PRPF4B-207ENST00000490399 CIPCQ9C0C6 399 aa5.27□□□□□ -1.57
PRPF4B-207ENST00000490399 EPS8L2Q9H6S3 715 aa5.27□□□□□ -1.57
PRPF4B-207ENST00000490399 ARPP21Q9UBL0 812 aaPredicted RBP5.27□□□□□ -1.57
PRPF4B-207ENST00000490399 MGAT4CQ9UBM8 478 aa5.27□□□□□ -1.57
PRPF4B-207ENST00000490399 SERGEFQ9UGK8 458 aa5.27□□□□□ -1.57
PRPF4B-207ENST00000490399 STEAP1Q9UHE8 339 aa5.27□□□□□ -1.57
PRPF4B-207ENST00000490399 MAGED2Q9UNF1 606 aaPredicted RBP5.27□□□□□ -1.57
PRPF4B-207ENST00000490399 COL15A1P39059 1388 aa5.27□□□□□ -1.57
PRPF4B-207ENST00000490399 SPATA31A6Q5VVP1 1343 aa5.26□□□□□ -1.57
PRPF4B-207ENST00000490399 A0A087WV62 115 aa5.26□□□□□ -1.57
PRPF4B-207ENST00000490399 TARM1B6A8C7 271 aa5.26□□□□□ -1.57
PRPF4B-207ENST00000490399 SMIM22K7EJ46 135 aa5.26□□□□□ -1.57
PRPF4B-207ENST00000490399 PPFIA2O75334 1257 aa5.26□□□□□ -1.57
PRPF4B-207ENST00000490399 NHLRC4P0CG21 123 aaPredicted RBP5.26□□□□□ -1.57
PRPF4B-207ENST00000490399 TMEM225BP0DP42 221 aa5.26□□□□□ -1.57
PRPF4B-207ENST00000490399 CD19P15391 556 aa5.26□□□□□ -1.57
PRPF4B-207ENST00000490399 COPB1P53618 953 aaKnown RBP5.26□□□□□ -1.57
PRPF4B-207ENST00000490399 LMAN2Q12907 356 aa5.26□□□□□ -1.57
PRPF4B-207ENST00000490399 CHAF1AQ13111 956 aaPredicted RBP5.26□□□□□ -1.57
PRPF4B-207ENST00000490399 MTAPQ13126 283 aa5.26□□□□□ -1.57
PRPF4B-207ENST00000490399 OS9Q13438 667 aaPredicted RBP5.26□□□□□ -1.57
PRPF4B-207ENST00000490399 SLC5A9Q2M3M2 681 aa5.26□□□□□ -1.57
PRPF4B-207ENST00000490399 TMEM119Q4V9L6 283 aa5.26□□□□□ -1.57
PRPF4B-207ENST00000490399 ZNF384Q8TF68 577 aa5.26□□□□□ -1.57
PRPF4B-207ENST00000490399 ABHD5Q8WTS1 349 aa5.26□□□□□ -1.57
PRPF4B-207ENST00000490399 SARAFQ96BY9 339 aa5.26□□□□□ -1.57
PRPF4B-207ENST00000490399 REPS1Q96D71 796 aa5.26□□□□□ -1.57
PRPF4B-207ENST00000490399 MMS19Q96T76 1030 aa5.26□□□□□ -1.57
PRPF4B-207ENST00000490399 OBP2BQ9NPH6 170 aa5.26□□□□□ -1.57
PRPF4B-207ENST00000490399 CBFA2T3O75081 653 aa5.25□□□□□ -1.57
PRPF4B-207ENST00000490399 USP1O94782 785 aa5.25□□□□□ -1.57
PRPF4B-207ENST00000490399 WDR47O94967 919 aa5.25□□□□□ -1.57
PRPF4B-207ENST00000490399 WT1P19544 449 aaPredicted RBP5.25□□□□□ -1.57
PRPF4B-207ENST00000490399 DRD1P21728 446 aa5.25□□□□□ -1.57
PRPF4B-207ENST00000490399 TNFAIP2Q03169 654 aa5.25□□□□□ -1.57
PRPF4B-207ENST00000490399 ATP1A4Q13733 1029 aa5.25□□□□□ -1.57
PRPF4B-207ENST00000490399 TRIM14Q14142 442 aa5.25□□□□□ -1.57
PRPF4B-207ENST00000490399 ACOX1Q15067 660 aa5.25□□□□□ -1.57
PRPF4B-207ENST00000490399 CEP85Q6P2H3 762 aa5.25□□□□□ -1.57
PRPF4B-207ENST00000490399 KIRREL2Q6UWL6 708 aa5.25□□□□□ -1.57
PRPF4B-207ENST00000490399 RD3Q7Z3Z2 195 aa5.25□□□□□ -1.57
PRPF4B-207ENST00000490399 ADGRG3Q86Y34 549 aa5.25□□□□□ -1.57
PRPF4B-207ENST00000490399 P3H2Q8IVL5 708 aa5.25□□□□□ -1.57
PRPF4B-207ENST00000490399 TERB1Q8NA31 727 aa5.25□□□□□ -1.57
PRPF4B-207ENST00000490399 ZNF527Q8NB42 609 aa5.25□□□□□ -1.57
PRPF4B-207ENST00000490399 TBC1D5Q92609 795 aa5.25□□□□□ -1.57
PRPF4B-207ENST00000490399 WDR24Q96S15 920 aa5.25□□□□□ -1.57
PRPF4B-207ENST00000490399 NECTIN3Q9NQS3 549 aa5.25□□□□□ -1.57
PRPF4B-207ENST00000490399 TM7SF3Q9NS93 570 aa5.25□□□□□ -1.57
PRPF4B-207ENST00000490399 WNT6Q9Y6F9 365 aa5.25□□□□□ -1.57
PRPF4B-207ENST00000490399 J3KTA2 159 aa5.24□□□□□ -1.57
PRPF4B-207ENST00000490399 FFAR2O15552 330 aa5.24□□□□□ -1.57
PRPF4B-207ENST00000490399 TNFRSF6BO95407 300 aa5.24□□□□□ -1.57
PRPF4B-207ENST00000490399 VIPP01282 170 aa5.24□□□□□ -1.57
PRPF4B-207ENST00000490399 MYCLP12524 364 aaPredicted RBP5.24□□□□□ -1.57
PRPF4B-207ENST00000490399 SLC5A2P31639 672 aa5.24□□□□□ -1.57
PRPF4B-207ENST00000490399 NSUN2Q08J23 767 aaKnown RBP eCLIP5.24□□□□□ -1.57
PRPF4B-207ENST00000490399 BFSP2Q13515 415 aa5.24□□□□□ -1.57
PRPF4B-207ENST00000490399 CLCA4Q14CN2 919 aa5.24□□□□□ -1.57
Retrieved 100 of 20,778 RNA–protein pairs in 16.5 ms