RNA–Protein interactions for RNA: ENST00000490258.1

CRNKL1-203, Transcript of crooked neck pre-mRNA splicing factor 1, humanhuman

TSL 2

Gene CRNKL1, Length 733 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CRNKL1-203ENST00000490258 CDK5RAP1Q96SZ6 601 aaKnown RBP3.7□□□□□ -1.82
CRNKL1-203ENST00000490258 TUBGCP2Q9BSJ2 902 aa3.7□□□□□ -1.82
CRNKL1-203ENST00000490258 TMEM109Q9BVC6 243 aa3.7□□□□□ -1.82
CRNKL1-203ENST00000490258 CCSER1Q9C0I3 900 aa3.7□□□□□ -1.82
CRNKL1-203ENST00000490258 ANKRD2Q9GZV1 360 aa3.7□□□□□ -1.82
CRNKL1-203ENST00000490258 NAPBQ9H115 298 aa3.7□□□□□ -1.82
CRNKL1-203ENST00000490258 VPS16Q9H269 839 aa3.7□□□□□ -1.82
CRNKL1-203ENST00000490258 R3HDMLQ9H3Y0 253 aa3.7□□□□□ -1.82
CRNKL1-203ENST00000490258 MLXIPQ9HAP2 919 aa3.7□□□□□ -1.82
CRNKL1-203ENST00000490258 CABP5Q9NP86 173 aa3.7□□□□□ -1.82
CRNKL1-203ENST00000490258 AGPAT5Q9NUQ2 364 aa3.7□□□□□ -1.82
CRNKL1-203ENST00000490258 SPATS2LQ9NUQ6 558 aaKnown RBP3.7□□□□□ -1.82
CRNKL1-203ENST00000490258 SLC5A4Q9NY91 659 aa3.7□□□□□ -1.82
CRNKL1-203ENST00000490258 NTMQ9P121 344 aa3.7□□□□□ -1.82
CRNKL1-203ENST00000490258 VPS54Q9P1Q0 977 aa3.7□□□□□ -1.82
CRNKL1-203ENST00000490258 SIRPGQ9P1W8 387 aa3.7□□□□□ -1.82
CRNKL1-203ENST00000490258 CTNNAL1Q9UBT7 734 aa3.7□□□□□ -1.82
CRNKL1-203ENST00000490258 LRWD1Q9UFC0 647 aa3.7□□□□□ -1.82
CRNKL1-203ENST00000490258 SWAP70Q9UH65 585 aa3.7□□□□□ -1.82
CRNKL1-203ENST00000490258 ANAPC4Q9UJX5 808 aa3.7□□□□□ -1.82
CRNKL1-203ENST00000490258 NENFQ9UMX5 172 aa3.7□□□□□ -1.82
CRNKL1-203ENST00000490258 TFR2Q9UP52 801 aa3.7□□□□□ -1.82
CRNKL1-203ENST00000490258 PLAAQ9Y263 795 aa3.7□□□□□ -1.82
CRNKL1-203ENST00000490258 GDAQ9Y2T3 454 aa3.7□□□□□ -1.82
CRNKL1-203ENST00000490258 TRAF6Q9Y4K3 522 aa3.7□□□□□ -1.82
CRNKL1-203ENST00000490258 ATRNL1Q5VV63 1379 aa3.7□□□□□ -1.82
CRNKL1-203ENST00000490258 MYH11P35749 1972 aa3.7□□□□□ -1.82
CRNKL1-203ENST00000490258 DOCK3Q8IZD9 2030 aa3.7□□□□□ -1.82
CRNKL1-203ENST00000490258 GAKO14976 1311 aa3.7□□□□□ -1.82
CRNKL1-203ENST00000490258 GOLGA6L10A6NI86 522 aa3.69□□□□□ -1.82
CRNKL1-203ENST00000490258 E7ENQ6 273 aa3.69□□□□□ -1.82
CRNKL1-203ENST00000490258 E7EVH7 732 aa3.69□□□□□ -1.82
CRNKL1-203ENST00000490258 F8VZ95 297 aa3.69□□□□□ -1.82
CRNKL1-203ENST00000490258 CCDC188H7C350 402 aa3.69□□□□□ -1.82
CRNKL1-203ENST00000490258 PDLIM1O00151 329 aa3.69□□□□□ -1.82
CRNKL1-203ENST00000490258 AGRPO00253 132 aa3.69□□□□□ -1.82
CRNKL1-203ENST00000490258 LAD1O00515 517 aa3.69□□□□□ -1.82
CRNKL1-203ENST00000490258 PES1O00541 588 aaKnown RBP3.69□□□□□ -1.82
CRNKL1-203ENST00000490258 MPHOSPH10O00566 681 aaKnown RBP3.69□□□□□ -1.82
CRNKL1-203ENST00000490258 B4GALT3O60512 393 aa3.69□□□□□ -1.82
CRNKL1-203ENST00000490258 PPFIA2O75334 1257 aa3.69□□□□□ -1.82
CRNKL1-203ENST00000490258 DGKIO75912 1065 aa3.69□□□□□ -1.82
CRNKL1-203ENST00000490258 FLOT1O75955 427 aa3.69□□□□□ -1.82
CRNKL1-203ENST00000490258 NEBLO76041 1014 aa3.69□□□□□ -1.82
CRNKL1-203ENST00000490258 KLHL18O94889 574 aa3.69□□□□□ -1.82
CRNKL1-203ENST00000490258 MOCS3O95396 460 aa3.69□□□□□ -1.82
CRNKL1-203ENST00000490258 SOD2P04179 222 aa3.69□□□□□ -1.82
CRNKL1-203ENST00000490258 PDGFRBP09619 1106 aa3.69□□□□□ -1.82
CRNKL1-203ENST00000490258 CALM1P0DP23 149 aa3.69□□□□□ -1.82
CRNKL1-203ENST00000490258 CALM2P0DP24 149 aa3.69□□□□□ -1.82
CRNKL1-203ENST00000490258 CALM3P0DP25 149 aa3.69□□□□□ -1.82
CRNKL1-203ENST00000490258 PCP11498 1178 aaKnown RBP3.69□□□□□ -1.82
CRNKL1-203ENST00000490258 NEFHP12036 1026 aa3.69□□□□□ -1.82
CRNKL1-203ENST00000490258 GNAT2P19087 354 aa3.69□□□□□ -1.82
CRNKL1-203ENST00000490258 TRIM21P19474 475 aaKnown RBP3.69□□□□□ -1.82
CRNKL1-203ENST00000490258 SKIV2L2P42285 1042 aaKnown RBP3.69□□□□□ -1.82
CRNKL1-203ENST00000490258 ECE1P42892 770 aa3.69□□□□□ -1.82
CRNKL1-203ENST00000490258 NT5C2P49902 561 aa3.69□□□□□ -1.82
CRNKL1-203ENST00000490258 RAB27AP51159 221 aa3.69□□□□□ -1.82
CRNKL1-203ENST00000490258 ZNF131P52739 623 aa3.69□□□□□ -1.82
CRNKL1-203ENST00000490258 EIF3BP55884 814 aaKnown RBP3.69□□□□□ -1.82
CRNKL1-203ENST00000490258 SARNPP82979 210 aaKnown RBP3.69□□□□□ -1.82
CRNKL1-203ENST00000490258 AMPD3Q01432 767 aa3.69□□□□□ -1.82
CRNKL1-203ENST00000490258 POU5F1Q01860 360 aaKnown RBP3.69□□□□□ -1.82
CRNKL1-203ENST00000490258 GUCY2DQ02846 1103 aa3.69□□□□□ -1.82
CRNKL1-203ENST00000490258 MAP3K12Q12852 859 aa3.69□□□□□ -1.82
CRNKL1-203ENST00000490258 GRM1Q13255 1194 aa3.69□□□□□ -1.82
CRNKL1-203ENST00000490258 BIRC2Q13490 618 aa3.69□□□□□ -1.82
CRNKL1-203ENST00000490258 CCDC96Q2M329 555 aa3.69□□□□□ -1.82
CRNKL1-203ENST00000490258 SGSM1Q2NKQ1 1148 aa3.69□□□□□ -1.82
CRNKL1-203ENST00000490258 ACCSLQ4AC99 568 aa3.69□□□□□ -1.82
CRNKL1-203ENST00000490258 CCDC38Q502W7 563 aa3.69□□□□□ -1.82
CRNKL1-203ENST00000490258 TM4SF20Q53R12 229 aa3.69□□□□□ -1.82
CRNKL1-203ENST00000490258 TRIM61Q5EBN2 209 aa3.69□□□□□ -1.82
CRNKL1-203ENST00000490258 TNFAIP8L3Q5GJ75 292 aa3.69□□□□□ -1.82
CRNKL1-203ENST00000490258 FKBP15Q5T1M5 1219 aa3.69□□□□□ -1.82
CRNKL1-203ENST00000490258 KCTD16Q68DU8 428 aa3.69□□□□□ -1.82
CRNKL1-203ENST00000490258 APOBEC3HQ6NTF7 200 aaKnown RBP3.69□□□□□ -1.82
CRNKL1-203ENST00000490258 MIS18BP1Q6P0N0 1132 aa3.69□□□□□ -1.82
CRNKL1-203ENST00000490258 PDXDC1Q6P996 788 aa3.69□□□□□ -1.82
CRNKL1-203ENST00000490258 CD300LDQ6UXZ3 194 aa3.69□□□□□ -1.82
CRNKL1-203ENST00000490258 LRRC55Q6ZSA7 311 aa3.69□□□□□ -1.82
CRNKL1-203ENST00000490258 TSHZ1Q6ZSZ6 1077 aa3.69□□□□□ -1.82
CRNKL1-203ENST00000490258 CACNA2D4Q7Z3S7 1137 aa3.69□□□□□ -1.82
CRNKL1-203ENST00000490258 CEP57Q86XR8 500 aa3.69□□□□□ -1.82
CRNKL1-203ENST00000490258 MFN1Q8IWA4 741 aa3.69□□□□□ -1.82
CRNKL1-203ENST00000490258 CSGALNACT2Q8N6G5 542 aa3.69□□□□□ -1.82
CRNKL1-203ENST00000490258 USP38Q8NB14 1042 aa3.69□□□□□ -1.82
CRNKL1-203ENST00000490258 TXNDC5Q8NBS9 432 aaKnown RBP3.69□□□□□ -1.82
CRNKL1-203ENST00000490258 CCDC197Q8NCU1 140 aa3.69□□□□□ -1.82
CRNKL1-203ENST00000490258 PCDH19Q8TAB3 1148 aa3.69□□□□□ -1.82
CRNKL1-203ENST00000490258 ACTRT1Q8TDG2 376 aa3.69□□□□□ -1.82
CRNKL1-203ENST00000490258 SCFD2Q8WU76 684 aa3.69□□□□□ -1.82
CRNKL1-203ENST00000490258 NUP133Q8WUM0 1156 aa3.69□□□□□ -1.82
CRNKL1-203ENST00000490258 NSMCE1Q8WV22 266 aa3.69□□□□□ -1.82
CRNKL1-203ENST00000490258 LMBR1Q8WVP7 490 aa3.69□□□□□ -1.82
CRNKL1-203ENST00000490258 JDP2Q8WYK2 163 aa3.69□□□□□ -1.82
CRNKL1-203ENST00000490258 RAPGEF5Q92565 580 aa3.69□□□□□ -1.82
CRNKL1-203ENST00000490258 ITFG2Q969R8 447 aa3.69□□□□□ -1.82
CRNKL1-203ENST00000490258 STAMBPL1Q96FJ0 436 aa3.69□□□□□ -1.82
Retrieved 100 of 20,778 RNA–protein pairs in 13.8 ms