RNA–Protein interactions for RNA: ENST00000489537.5

SF3A3-208, Transcript of splicing factor 3a subunit 3, humanhuman

TSL 4

Gene SF3A3, Length 891 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3A3-208ENST00000489537 B3GALNT2Q8NCR0 500 aa6.65□□□□□ -1.34
SF3A3-208ENST00000489537 SMG8Q8ND04 991 aaKnown RBP6.65□□□□□ -1.34
SF3A3-208ENST00000489537 CASKIN2Q8WXE0 1202 aa6.65□□□□□ -1.34
SF3A3-208ENST00000489537 IRGQQ8WZA9 623 aa6.65□□□□□ -1.34
SF3A3-208ENST00000489537 ART4Q93070 314 aa6.65□□□□□ -1.34
SF3A3-208ENST00000489537 CCDC114Q96M63 670 aa6.65□□□□□ -1.34
SF3A3-208ENST00000489537 CEP295NLQ96MC4 621 aa6.65□□□□□ -1.34
SF3A3-208ENST00000489537 SLITRK1Q96PX8 696 aa6.65□□□□□ -1.34
SF3A3-208ENST00000489537 CPXM1Q96SM3 734 aa6.65□□□□□ -1.34
SF3A3-208ENST00000489537 INSM2Q96T92 566 aaPredicted RBP6.65□□□□□ -1.34
SF3A3-208ENST00000489537 OCSTAMPQ9BR26 566 aa6.65□□□□□ -1.34
SF3A3-208ENST00000489537 ACBD6Q9BR61 282 aa6.65□□□□□ -1.34
SF3A3-208ENST00000489537 ZNF670Q9BS34 389 aa6.65□□□□□ -1.34
SF3A3-208ENST00000489537 TMEM109Q9BVC6 243 aa6.65□□□□□ -1.34
SF3A3-208ENST00000489537 DUSP16Q9BY84 665 aa6.65□□□□□ -1.34
SF3A3-208ENST00000489537 EPC1Q9H2F5 836 aa6.65□□□□□ -1.34
SF3A3-208ENST00000489537 PABPC3Q9H361 631 aaKnown RBP6.65□□□□□ -1.34
SF3A3-208ENST00000489537 GOLPH3Q9H4A6 298 aa6.65□□□□□ -1.34
SF3A3-208ENST00000489537 C11orf49Q9H6J7 331 aa6.65□□□□□ -1.34
SF3A3-208ENST00000489537 CNOT10Q9H9A5 744 aaKnown RBP6.65□□□□□ -1.34
SF3A3-208ENST00000489537 LRRC4Q9HBW1 653 aa6.65□□□□□ -1.34
SF3A3-208ENST00000489537 ERVK-5Q9HDB9 667 aa6.65□□□□□ -1.34
SF3A3-208ENST00000489537 CNGB3Q9NQW8 809 aa6.65□□□□□ -1.34
SF3A3-208ENST00000489537 STARD7Q9NQZ5 370 aa6.65□□□□□ -1.34
SF3A3-208ENST00000489537 GOLGA6AQ9NYA3 693 aa6.65□□□□□ -1.34
SF3A3-208ENST00000489537 STK39Q9UEW8 545 aa6.65□□□□□ -1.34
SF3A3-208ENST00000489537 ASIC3Q9UHC3 531 aa6.65□□□□□ -1.34
SF3A3-208ENST00000489537 USP18Q9UMW8 372 aa6.65□□□□□ -1.34
SF3A3-208ENST00000489537 USTQ9Y2C2 406 aa6.65□□□□□ -1.34
SF3A3-208ENST00000489537 RALGAPA2Q2PPJ7 1873 aa6.64□□□□□ -1.35
SF3A3-208ENST00000489537 hCG_1818297A0A087WSY0 165 aa6.64□□□□□ -1.35
SF3A3-208ENST00000489537 C2CD4BA6NLJ0 364 aa6.64□□□□□ -1.35
SF3A3-208ENST00000489537 ZBBXA8MT70 800 aa6.64□□□□□ -1.35
SF3A3-208ENST00000489537 F8VP50 259 aa6.64□□□□□ -1.35
SF3A3-208ENST00000489537 GOLGA8SH3BPF8 625 aa6.64□□□□□ -1.35
SF3A3-208ENST00000489537 TMEM189-UBE2V1I3L0A0 370 aa6.64□□□□□ -1.35
SF3A3-208ENST00000489537 ERVH48-1M5A8F1 160 aa6.64□□□□□ -1.35
SF3A3-208ENST00000489537 MCF2LO15068 1137 aa6.64□□□□□ -1.35
SF3A3-208ENST00000489537 NCAM2O15394 837 aa6.64□□□□□ -1.35
SF3A3-208ENST00000489537 DAPK3O43293 454 aa6.64□□□□□ -1.35
SF3A3-208ENST00000489537 SASH3O75995 380 aa6.64□□□□□ -1.35
SF3A3-208ENST00000489537 STK10O94804 968 aaKnown RBP6.64□□□□□ -1.35
SF3A3-208ENST00000489537 NPR3P17342 541 aa6.64□□□□□ -1.35
SF3A3-208ENST00000489537 PTPN1P18031 435 aaKnown RBP6.64□□□□□ -1.35
SF3A3-208ENST00000489537 FGFR4P22455 802 aa6.64□□□□□ -1.35
SF3A3-208ENST00000489537 AKAP5P24588 427 aa6.64□□□□□ -1.35
SF3A3-208ENST00000489537 CYP2C18P33260 490 aa6.64□□□□□ -1.35
SF3A3-208ENST00000489537 ARL4AP40617 200 aa6.64□□□□□ -1.35
SF3A3-208ENST00000489537 MATKP42679 507 aa6.64□□□□□ -1.35
SF3A3-208ENST00000489537 CDKN2BP42772 138 aa6.64□□□□□ -1.35
SF3A3-208ENST00000489537 CTSOP43234 321 aaPredicted RBP6.64□□□□□ -1.35
SF3A3-208ENST00000489537 PMS2P54278 862 aa6.64□□□□□ -1.35
SF3A3-208ENST00000489537 VCPP55072 806 aaKnown RBP6.64□□□□□ -1.35
SF3A3-208ENST00000489537 RPL7AP62424 266 aaKnown RBP6.64□□□□□ -1.35
SF3A3-208ENST00000489537 SARNPP82979 210 aaKnown RBP6.64□□□□□ -1.35
SF3A3-208ENST00000489537 KRT17Q04695 432 aa6.64□□□□□ -1.35
SF3A3-208ENST00000489537 NR1H3Q13133 447 aa6.64□□□□□ -1.35
SF3A3-208ENST00000489537 XRCC4Q13426 336 aa6.64□□□□□ -1.35
SF3A3-208ENST00000489537 KRT81Q14533 505 aa6.64□□□□□ -1.35
SF3A3-208ENST00000489537 DSC3Q14574 896 aa6.64□□□□□ -1.35
SF3A3-208ENST00000489537 MORF4L2Q15014 288 aa6.64□□□□□ -1.35
SF3A3-208ENST00000489537 NFE2Q16621 373 aaPredicted RBP6.64□□□□□ -1.35
SF3A3-208ENST00000489537 TAZQ16635 292 aa6.64□□□□□ -1.35
SF3A3-208ENST00000489537 ARL13BQ3SXY8 428 aa6.64□□□□□ -1.35
SF3A3-208ENST00000489537 EMC10Q5UCC4 262 aa6.64□□□□□ -1.35
SF3A3-208ENST00000489537 OLFML1Q6UWY5 402 aa6.64□□□□□ -1.35
SF3A3-208ENST00000489537 LEKR1Q6ZMV7 388 aa6.64□□□□□ -1.35
SF3A3-208ENST00000489537 TAOK1Q7L7X3 1001 aa6.64□□□□□ -1.35
SF3A3-208ENST00000489537 TMC3Q7Z5M5 1100 aa6.64□□□□□ -1.35
SF3A3-208ENST00000489537 ACOT1Q86TX2 421 aa6.64□□□□□ -1.35
SF3A3-208ENST00000489537 DCP1BQ8IZD4 617 aaKnown RBP6.64□□□□□ -1.35
SF3A3-208ENST00000489537 SIX6OS1Q8N1H7 587 aa6.64□□□□□ -1.35
SF3A3-208ENST00000489537 ARHGAP18Q8N392 663 aa6.64□□□□□ -1.35
SF3A3-208ENST00000489537 RIBC1Q8N443 379 aaPredicted RBP6.64□□□□□ -1.35
SF3A3-208ENST00000489537 SLC43A3Q8NBI5 491 aa6.64□□□□□ -1.35
SF3A3-208ENST00000489537 MYCBPAPQ8TBZ2 947 aa6.64□□□□□ -1.35
SF3A3-208ENST00000489537 HDAC7Q8WUI4 952 aa6.64□□□□□ -1.35
SF3A3-208ENST00000489537 TMEM40Q8WWA1 233 aa6.64□□□□□ -1.35
SF3A3-208ENST00000489537 RSAD2Q8WXG1 361 aa6.64□□□□□ -1.35
SF3A3-208ENST00000489537 P3H4Q92791 437 aa6.64□□□□□ -1.35
SF3A3-208ENST00000489537 SMARCD1Q96GM5 515 aa6.64□□□□□ -1.35
SF3A3-208ENST00000489537 SENP8Q96LD8 212 aa6.64□□□□□ -1.35
SF3A3-208ENST00000489537 CFAP57Q96MR6 1250 aa6.64□□□□□ -1.35
SF3A3-208ENST00000489537 ZMAT2Q96NC0 199 aaKnown RBP6.64□□□□□ -1.35
SF3A3-208ENST00000489537 PPP1R2P1Q96PQ5 205 aa6.64□□□□□ -1.35
SF3A3-208ENST00000489537 FAM193BQ96PV7 902 aaPredicted RBP6.64□□□□□ -1.35
SF3A3-208ENST00000489537 SH3GL2Q99962 352 aa6.64□□□□□ -1.35
SF3A3-208ENST00000489537 HTATIP2Q9BUP3 242 aa6.64□□□□□ -1.35
SF3A3-208ENST00000489537 APOL6Q9BWW8 343 aa6.64□□□□□ -1.35
SF3A3-208ENST00000489537 MRPL9Q9BYD2 267 aaKnown RBP6.64□□□□□ -1.35
SF3A3-208ENST00000489537 BRD8Q9H0E9 1235 aa6.64□□□□□ -1.35
SF3A3-208ENST00000489537 SDCBP2Q9H190 292 aa6.64□□□□□ -1.35
SF3A3-208ENST00000489537 ZNF395Q9H8N7 513 aaPredicted RBP6.64□□□□□ -1.35
SF3A3-208ENST00000489537 ZWILCHQ9H900 591 aa6.64□□□□□ -1.35
SF3A3-208ENST00000489537 PCDH9Q9HC56 1237 aa6.64□□□□□ -1.35
SF3A3-208ENST00000489537 METTL5Q9NRN9 209 aaKnown RBP6.64□□□□□ -1.35
SF3A3-208ENST00000489537 TMPRSS4Q9NRS4 437 aa6.64□□□□□ -1.35
SF3A3-208ENST00000489537 RGS18Q9NS28 235 aa6.64□□□□□ -1.35
SF3A3-208ENST00000489537 FASTKD2Q9NYY8 710 aaKnown RBP eCLIP6.64□□□□□ -1.35
SF3A3-208ENST00000489537 CWC15Q9P013 229 aaKnown RBP6.64□□□□□ -1.35
Retrieved 100 of 20,778 RNA–protein pairs in 46.9 ms