RNA–Protein interactions for RNA: ENST00000489417.5

SND1-214, Transcript of staphylococcal nuclease and tudor domain containing 1, humanhuman

TSL 2

Gene SND1, Length 1,447 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SND1-214ENST00000489417 YBX2Q9Y2T7 364 aaKnown RBP21.81■■□□□ 1.08
SND1-214ENST00000489417 YIPF1Q9Y548 306 aa21.81■■□□□ 1.08
SND1-214ENST00000489417 IRAK3Q9Y616 596 aa21.81■■□□□ 1.08
SND1-214ENST00000489417 COL4A4P53420 1690 aaPredicted RBP21.81■■□□□ 1.08
SND1-214ENST00000489417 FAM92AA1XBS5 289 aa21.8■■□□□ 1.08
SND1-214ENST00000489417 CTAGE15A4D2H0 777 aa21.8■■□□□ 1.08
SND1-214ENST00000489417 PRPSAP2O60256 369 aa21.8■■□□□ 1.08
SND1-214ENST00000489417 KRT1P04264 644 aa21.8■■□□□ 1.08
SND1-214ENST00000489417 CTAGE8P0CG41 777 aa21.8■■□□□ 1.08
SND1-214ENST00000489417 DNAJB1P25685 340 aa21.8■■□□□ 1.08
SND1-214ENST00000489417 IL1R2P27930 398 aa21.8■■□□□ 1.08
SND1-214ENST00000489417 HDAC4P56524 1084 aa21.8■■□□□ 1.08
SND1-214ENST00000489417 OTUD1Q5VV17 481 aaPredicted RBP21.8■■□□□ 1.08
SND1-214ENST00000489417 PLPP4Q5VZY2 271 aa21.8■■□□□ 1.08
SND1-214ENST00000489417 ZNF572Q7Z3I7 529 aaPredicted RBP21.8■■□□□ 1.08
SND1-214ENST00000489417 SCD5Q86SK9 330 aa21.8■■□□□ 1.08
SND1-214ENST00000489417 CTAGE6Q86UF2 777 aa21.8■■□□□ 1.08
SND1-214ENST00000489417 CTAGE4Q8IX94 777 aa21.8■■□□□ 1.08
SND1-214ENST00000489417 TCEAL8Q8IYN2 117 aa21.8■■□□□ 1.08
SND1-214ENST00000489417 ARHGAP18Q8N392 663 aa21.8■■□□□ 1.08
SND1-214ENST00000489417 EXD1Q8NHP7 514 aa21.8■■□□□ 1.08
SND1-214ENST00000489417 EDEM1Q92611 657 aa21.8■■□□□ 1.08
SND1-214ENST00000489417 FBXO32Q969P5 355 aa21.8■■□□□ 1.08
SND1-214ENST00000489417 KLHL5Q96PQ7 755 aa21.8■■□□□ 1.08
SND1-214ENST00000489417 EMILIN2Q9BXX0 1053 aa21.8■■□□□ 1.08
SND1-214ENST00000489417 ADAM33Q9BZ11 813 aa21.8■■□□□ 1.08
SND1-214ENST00000489417 TLR9Q9NR96 1032 aa21.8■■□□□ 1.08
SND1-214ENST00000489417 PLXNA3P51805 1871 aa21.8■■□□□ 1.08
SND1-214ENST00000489417 H0YGN5 161 aa21.8■■□□□ 1.08
SND1-214ENST00000489417 PRRG1O14668 218 aa21.8■■□□□ 1.08
SND1-214ENST00000489417 ZRANB2O95218 330 aaKnown RBP eCLIP21.8■■□□□ 1.08
SND1-214ENST00000489417 ADH1AP07327 375 aa21.8■■□□□ 1.08
SND1-214ENST00000489417 ERVK-21P61565 698 aa21.8■■□□□ 1.08
SND1-214ENST00000489417 PITX1P78337 314 aaPredicted RBP21.8■■□□□ 1.08
SND1-214ENST00000489417 MTMR3Q13615 1198 aa21.8■■□□□ 1.08
SND1-214ENST00000489417 ATP13A4Q4VNC1 1196 aa21.8■■□□□ 1.08
SND1-214ENST00000489417 ZFYVE27Q5T4F4 411 aa21.8■■□□□ 1.08
SND1-214ENST00000489417 BTBD8Q5XKL5 378 aa21.8■■□□□ 1.08
SND1-214ENST00000489417 AADACL2Q6P093 401 aa21.8■■□□□ 1.08
SND1-214ENST00000489417 BNIPLQ7Z465 357 aa21.8■■□□□ 1.08
SND1-214ENST00000489417 MON1AQ86VX9 555 aa21.8■■□□□ 1.08
SND1-214ENST00000489417 LRRN4CLQ8ND94 238 aa21.8■■□□□ 1.08
SND1-214ENST00000489417 PEBP4Q96S96 227 aa21.8■■□□□ 1.08
SND1-214ENST00000489417 TTLL2Q9BWV7 592 aa21.8■■□□□ 1.08
SND1-214ENST00000489417 ABCC13Q9NSE7 274 aa21.8■■□□□ 1.08
SND1-214ENST00000489417 KLHL11Q9NVR0 708 aa21.8■■□□□ 1.08
SND1-214ENST00000489417 GMIPQ9P107 970 aa21.8■■□□□ 1.08
SND1-214ENST00000489417 GBF1Q92538 1859 aa21.79■■□□□ 1.08
SND1-214ENST00000489417 MYO16Q9Y6X6 1858 aa21.79■■□□□ 1.08
SND1-214ENST00000489417 HSFX4A0A1B0GTS1 333 aaPredicted RBP21.79■■□□□ 1.08
SND1-214ENST00000489417 HSFX3A0A1B0GWH4 333 aaPredicted RBP21.79■■□□□ 1.08
SND1-214ENST00000489417 A0A1W2PQH9 124 aa21.79■■□□□ 1.08
SND1-214ENST00000489417 M0QYT0 321 aa21.79■■□□□ 1.08
SND1-214ENST00000489417 FSCN2O14926 492 aa21.79■■□□□ 1.08
SND1-214ENST00000489417 GRM6O15303 877 aa21.79■■□□□ 1.08
SND1-214ENST00000489417 ENDOD1O94919 500 aa21.79■■□□□ 1.08
SND1-214ENST00000489417 ALDH1A3P47895 512 aa21.79■■□□□ 1.08
SND1-214ENST00000489417 CLUL1Q15846 466 aa21.79■■□□□ 1.08
SND1-214ENST00000489417 SCYL2Q6P3W7 929 aa21.79■■□□□ 1.08
SND1-214ENST00000489417 RCOR2Q8IZ40 523 aa21.79■■□□□ 1.08
SND1-214ENST00000489417 MRPL43Q8N983 215 aaKnown RBP21.79■■□□□ 1.08
SND1-214ENST00000489417 MYRIPQ8NFW9 859 aa21.79■■□□□ 1.08
SND1-214ENST00000489417 SLC7A14Q8TBB6 771 aa21.79■■□□□ 1.08
SND1-214ENST00000489417 RBM41Q96IZ5 413 aaKnown RBP21.79■■□□□ 1.08
SND1-214ENST00000489417 RPGRIP1Q96KN7 1286 aa21.79■■□□□ 1.08
SND1-214ENST00000489417 NMUR1Q9HB89 426 aa21.79■■□□□ 1.08
SND1-214ENST00000489417 C2orf71A6NGG8 1288 aa21.78■■□□□ 1.08
SND1-214ENST00000489417 TGM5O43548 720 aa21.78■■□□□ 1.08
SND1-214ENST00000489417 LPXNO60711 386 aa21.78■■□□□ 1.08
SND1-214ENST00000489417 CSPG5O95196 566 aa21.78■■□□□ 1.08
SND1-214ENST00000489417 FGGP02679 453 aa21.78■■□□□ 1.08
SND1-214ENST00000489417 RARAP10276 462 aa21.78■■□□□ 1.08
SND1-214ENST00000489417 RDXP35241 583 aaKnown RBP21.78■■□□□ 1.08
SND1-214ENST00000489417 PBX2P40425 430 aa21.78■■□□□ 1.08
SND1-214ENST00000489417 PGFP49763 221 aa21.78■■□□□ 1.08
SND1-214ENST00000489417 ATXN1P54253 815 aaKnown RBP21.78■■□□□ 1.08
SND1-214ENST00000489417 DEUP1Q05D60 604 aa21.78■■□□□ 1.08
SND1-214ENST00000489417 TAF10Q12962 218 aa21.78■■□□□ 1.08
SND1-214ENST00000489417 SMTNL2Q2TAL5 461 aa21.78■■□□□ 1.08
SND1-214ENST00000489417 ODF2Q5BJF6 829 aa21.78■■□□□ 1.08
SND1-214ENST00000489417 CYP4V2Q6ZWL3 525 aaPredicted RBP21.78■■□□□ 1.08
SND1-214ENST00000489417 CCDC50Q8IVM0 306 aa21.78■■□□□ 1.08
SND1-214ENST00000489417 ACSF2Q96CM8 615 aaPredicted RBP21.78■■□□□ 1.08
SND1-214ENST00000489417 NAP1L3Q99457 506 aaPredicted RBP21.78■■□□□ 1.08
SND1-214ENST00000489417 PBX4Q9BYU1 374 aa21.78■■□□□ 1.08
SND1-214ENST00000489417 CALCOCO1Q9P1Z2 691 aa21.78■■□□□ 1.08
SND1-214ENST00000489417 INSL5Q9Y5Q6 135 aa21.78■■□□□ 1.08
SND1-214ENST00000489417 HIDE1A8MVS5 230 aa21.77■■□□□ 1.08
SND1-214ENST00000489417 PI4K2BG5E9Z4 385 aa21.77■■□□□ 1.08
SND1-214ENST00000489417 CSH1P0DML2 217 aa21.77■■□□□ 1.08
SND1-214ENST00000489417 CSH2P0DML3 217 aa21.77■■□□□ 1.08
SND1-214ENST00000489417 KLRC2P26717 231 aa21.77■■□□□ 1.08
SND1-214ENST00000489417 CETN2P41208 172 aa21.77■■□□□ 1.08
SND1-214ENST00000489417 VEPH1Q14D04 833 aa21.77■■□□□ 1.08
SND1-214ENST00000489417 RAB30Q15771 203 aa21.77■■□□□ 1.08
SND1-214ENST00000489417 LONRF2Q1L5Z9 754 aa21.77■■□□□ 1.08
SND1-214ENST00000489417 BOLA3Q53S33 107 aa21.77■■□□□ 1.08
SND1-214ENST00000489417 KCNT1Q5JUK3 1230 aa21.77■■□□□ 1.08
SND1-214ENST00000489417 LILRA6Q6PI73 481 aa21.77■■□□□ 1.08
SND1-214ENST00000489417 DQX1Q8TE96 717 aaKnown RBP21.77■■□□□ 1.08
Retrieved 100 of 20,778 RNA–protein pairs in 62.7 ms