RNA–Protein interactions for RNA: ENST00000489318.1

C9orf3-220, Transcript of chromosome 9 open reading frame 3, humanhuman

TSL 3

Gene C9orf3, Length 682 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C9orf3-220ENST00000489318 FSCN2O14926 492 aa11.99□□□□□ -0.49
C9orf3-220ENST00000489318 TEX28O15482 410 aa11.99□□□□□ -0.49
C9orf3-220ENST00000489318 ZRANB2O95218 330 aaKnown RBP eCLIP11.99□□□□□ -0.49
C9orf3-220ENST00000489318 KRT1P04264 644 aa11.99□□□□□ -0.49
C9orf3-220ENST00000489318 RB1P06400 928 aa11.99□□□□□ -0.49
C9orf3-220ENST00000489318 UQCRHP07919 91 aa11.99□□□□□ -0.49
C9orf3-220ENST00000489318 ZDHHC11BP0C7U3 371 aa11.99□□□□□ -0.49
C9orf3-220ENST00000489318 RARAP10276 462 aa11.99□□□□□ -0.49
C9orf3-220ENST00000489318 CTNNB1P35222 781 aa11.99□□□□□ -0.49
C9orf3-220ENST00000489318 RDXP35241 583 aaKnown RBP11.99□□□□□ -0.49
C9orf3-220ENST00000489318 AIF1P55008 147 aa11.99□□□□□ -0.49
C9orf3-220ENST00000489318 YWHAGP61981 247 aaKnown RBP eCLIP11.99□□□□□ -0.49
C9orf3-220ENST00000489318 ATP11AP98196 1134 aa11.99□□□□□ -0.49
C9orf3-220ENST00000489318 C2orf54Q08AI8 447 aa11.99□□□□□ -0.49
C9orf3-220ENST00000489318 DUSP4Q13115 394 aa11.99□□□□□ -0.49
C9orf3-220ENST00000489318 SIX1Q15475 284 aaPredicted RBP11.99□□□□□ -0.49
C9orf3-220ENST00000489318 CYP1B1Q16678 543 aa11.99□□□□□ -0.49
C9orf3-220ENST00000489318 DDR2Q16832 855 aa11.99□□□□□ -0.49
C9orf3-220ENST00000489318 CDO1Q16878 200 aa11.99□□□□□ -0.49
C9orf3-220ENST00000489318 MGAT5BQ3V5L5 792 aa11.99□□□□□ -0.49
C9orf3-220ENST00000489318 RAB6CQ53S08 254 aa11.99□□□□□ -0.49
C9orf3-220ENST00000489318 BOLA3Q53S33 107 aa11.99□□□□□ -0.49
C9orf3-220ENST00000489318 DCAF6Q58WW2 860 aa11.99□□□□□ -0.49
C9orf3-220ENST00000489318 BSPRYQ5W0U4 402 aa11.99□□□□□ -0.49
C9orf3-220ENST00000489318 AADACL2Q6P093 401 aa11.99□□□□□ -0.49
C9orf3-220ENST00000489318 MSANTD2Q6P1R3 559 aa11.99□□□□□ -0.49
C9orf3-220ENST00000489318 SCD5Q86SK9 330 aa11.99□□□□□ -0.49
C9orf3-220ENST00000489318 PSTKQ8IV42 348 aaKnown RBP11.99□□□□□ -0.49
C9orf3-220ENST00000489318 TCEAL8Q8IYN2 117 aa11.99□□□□□ -0.49
C9orf3-220ENST00000489318 RCOR2Q8IZ40 523 aa11.99□□□□□ -0.49
C9orf3-220ENST00000489318 ARHGAP18Q8N392 663 aa11.99□□□□□ -0.49
C9orf3-220ENST00000489318 C12orf50Q8NA57 414 aaPredicted RBP11.99□□□□□ -0.49
C9orf3-220ENST00000489318 NOA1Q8NC60 698 aaKnown RBP11.99□□□□□ -0.49
C9orf3-220ENST00000489318 NTAN1Q96AB6 310 aa11.99□□□□□ -0.49
C9orf3-220ENST00000489318 SAMD11Q96NU1 681 aa11.99□□□□□ -0.49
C9orf3-220ENST00000489318 SEPT5Q99719 369 aaPredicted RBP11.99□□□□□ -0.49
C9orf3-220ENST00000489318 RAB6CQ9H0N0 254 aa11.99□□□□□ -0.49
C9orf3-220ENST00000489318 NGRNQ9NPE2 291 aaKnown RBP11.99□□□□□ -0.49
C9orf3-220ENST00000489318 ABCC13Q9NSE7 274 aa11.99□□□□□ -0.49
C9orf3-220ENST00000489318 RBM12Q9NTZ6 932 aaKnown RBP11.99□□□□□ -0.49
C9orf3-220ENST00000489318 TMEM51Q9NW97 253 aa11.99□□□□□ -0.49
C9orf3-220ENST00000489318 NAALADL1Q9UQQ1 740 aa11.99□□□□□ -0.49
C9orf3-220ENST00000489318 DENND4CQ5VZ89 1909 aa11.99□□□□□ -0.49
C9orf3-220ENST00000489318 ANAPC1Q9H1A4 1944 aa11.98□□□□□ -0.49
C9orf3-220ENST00000489318 hCG_1818297A0A087WSY0 165 aa11.98□□□□□ -0.49
C9orf3-220ENST00000489318 PRPSAP2O60256 369 aa11.98□□□□□ -0.49
C9orf3-220ENST00000489318 SEC24AO95486 1093 aa11.98□□□□□ -0.49
C9orf3-220ENST00000489318 C1RP00736 705 aa11.98□□□□□ -0.49
C9orf3-220ENST00000489318 CDKN2BP42772 138 aa11.98□□□□□ -0.49
C9orf3-220ENST00000489318 SSR1P43307 286 aaKnown RBP11.98□□□□□ -0.49
C9orf3-220ENST00000489318 PSEN1P49768 467 aa11.98□□□□□ -0.49
C9orf3-220ENST00000489318 USP46P62068 366 aa11.98□□□□□ -0.49
C9orf3-220ENST00000489318 PITX1P78337 314 aaPredicted RBP11.98□□□□□ -0.49
C9orf3-220ENST00000489318 SCAPQ12770 1279 aa11.98□□□□□ -0.49
C9orf3-220ENST00000489318 DPYSL2Q16555 572 aa11.98□□□□□ -0.49
C9orf3-220ENST00000489318 LONRF2Q1L5Z9 754 aa11.98□□□□□ -0.49
C9orf3-220ENST00000489318 ATP13A4Q4VNC1 1196 aa11.98□□□□□ -0.49
C9orf3-220ENST00000489318 SDHAF4Q5VUM1 108 aa11.98□□□□□ -0.49
C9orf3-220ENST00000489318 MFSD7Q6UXD7 560 aa11.98□□□□□ -0.49
C9orf3-220ENST00000489318 SPOCD1Q6ZMY3 1216 aa11.98□□□□□ -0.49
C9orf3-220ENST00000489318 ANKS1BQ7Z6G8 1248 aa11.98□□□□□ -0.49
C9orf3-220ENST00000489318 MON1AQ86VX9 555 aa11.98□□□□□ -0.49
C9orf3-220ENST00000489318 ZDHHC14Q8IZN3 488 aa11.98□□□□□ -0.49
C9orf3-220ENST00000489318 ZNF276Q8N554 614 aa11.98□□□□□ -0.49
C9orf3-220ENST00000489318 DQX1Q8TE96 717 aaKnown RBP11.98□□□□□ -0.49
C9orf3-220ENST00000489318 MAIP1Q8WWC4 291 aa11.98□□□□□ -0.49
C9orf3-220ENST00000489318 OVCA2Q8WZ82 227 aa11.98□□□□□ -0.49
C9orf3-220ENST00000489318 RAPGEF5Q92565 580 aa11.98□□□□□ -0.49
C9orf3-220ENST00000489318 TRMT2BQ96GJ1 504 aaKnown RBP11.98□□□□□ -0.49
C9orf3-220ENST00000489318 MYRFLQ96LU7 910 aa11.98□□□□□ -0.49
C9orf3-220ENST00000489318 GDF15Q99988 308 aa11.98□□□□□ -0.49
C9orf3-220ENST00000489318 HERPUD2Q9BSE4 406 aa11.98□□□□□ -0.49
C9orf3-220ENST00000489318 SNRNP25Q9BV90 132 aaKnown RBP11.98□□□□□ -0.49
C9orf3-220ENST00000489318 SMOC2Q9H3U7 446 aa11.98□□□□□ -0.49
C9orf3-220ENST00000489318 NMUR1Q9HB89 426 aa11.98□□□□□ -0.49
C9orf3-220ENST00000489318 WDR6Q9NNW5 1121 aaKnown RBP11.98□□□□□ -0.49
C9orf3-220ENST00000489318 SLTMQ9NWH9 1034 aaKnown RBP eCLIP11.98□□□□□ -0.49
C9orf3-220ENST00000489318 CLIC5Q9NZA1 410 aa11.98□□□□□ -0.49
C9orf3-220ENST00000489318 SLC27A5Q9Y2P5 690 aa11.98□□□□□ -0.49
C9orf3-220ENST00000489318 YIPF1Q9Y548 306 aa11.98□□□□□ -0.49
C9orf3-220ENST00000489318 PCDHA11Q9Y5I1 949 aa11.98□□□□□ -0.49
C9orf3-220ENST00000489318 GOLGA6L10A0A0M3HER8 536 aa11.97□□□□□ -0.49
C9orf3-220ENST00000489318 LRRD1A4D1F6 860 aa11.97□□□□□ -0.49
C9orf3-220ENST00000489318 CCDC85CA6NKD9 419 aa11.97□□□□□ -0.49
C9orf3-220ENST00000489318 SLC38A8A6NNN8 435 aa11.97□□□□□ -0.49
C9orf3-220ENST00000489318 M0QYT0 321 aa11.97□□□□□ -0.49
C9orf3-220ENST00000489318 KRIT1O00522 736 aa11.97□□□□□ -0.49
C9orf3-220ENST00000489318 CAPN9O14815 690 aa11.97□□□□□ -0.49
C9orf3-220ENST00000489318 IRAK2O43187 625 aa11.97□□□□□ -0.49
C9orf3-220ENST00000489318 SOAT2O75908 522 aa11.97□□□□□ -0.49
C9orf3-220ENST00000489318 ARHGEF15O94989 841 aa11.97□□□□□ -0.49
C9orf3-220ENST00000489318 F9P00740 461 aa11.97□□□□□ -0.49
C9orf3-220ENST00000489318 RALAP11233 206 aa11.97□□□□□ -0.49
C9orf3-220ENST00000489318 NCAM1P13591 858 aa11.97□□□□□ -0.49
C9orf3-220ENST00000489318 KDELR1P24390 212 aa11.97□□□□□ -0.49
C9orf3-220ENST00000489318 DNAJB2P25686 324 aa11.97□□□□□ -0.49
C9orf3-220ENST00000489318 YWHAQP27348 245 aa11.97□□□□□ -0.49
C9orf3-220ENST00000489318 GJC1P36383 396 aa11.97□□□□□ -0.49
C9orf3-220ENST00000489318 CETN2P41208 172 aa11.97□□□□□ -0.49
C9orf3-220ENST00000489318 NNTQ13423 1086 aa11.97□□□□□ -0.49
Retrieved 100 of 20,778 RNA–protein pairs in 29.8 ms