RNA–Protein interactions for RNA: ENST00000488920.2

CCHCR1-215, Transcript of coiled-coil alpha-helical rod protein 1, humanhuman

TSL 3

Gene CCHCR1, Length 715 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCHCR1-215ENST00000488920 DGKEP52429 567 aa12.57□□□□□ -0.4
CCHCR1-215ENST00000488920 ATXN1P54253 815 aaKnown RBP12.57□□□□□ -0.4
CCHCR1-215ENST00000488920 MRPS21P82921 87 aaKnown RBP12.57□□□□□ -0.4
CCHCR1-215ENST00000488920 LRMPQ12912 555 aa12.57□□□□□ -0.4
CCHCR1-215ENST00000488920 STIM1Q13586 685 aa12.57□□□□□ -0.4
CCHCR1-215ENST00000488920 CSRP2Q16527 193 aa12.57□□□□□ -0.4
CCHCR1-215ENST00000488920 KLHL10Q6JEL2 608 aa12.57□□□□□ -0.4
CCHCR1-215ENST00000488920 HTR3DQ70Z44 454 aa12.57□□□□□ -0.4
CCHCR1-215ENST00000488920 TTC30AQ86WT1 665 aa12.57□□□□□ -0.4
CCHCR1-215ENST00000488920 ELOA2Q8IYF1 753 aaPredicted RBP12.57□□□□□ -0.4
CCHCR1-215ENST00000488920 ALLCQ8N6M5 410 aa12.57□□□□□ -0.4
CCHCR1-215ENST00000488920 TSTD1Q8NFU3 115 aa12.57□□□□□ -0.4
CCHCR1-215ENST00000488920 SLC35C1Q96A29 364 aa12.57□□□□□ -0.4
CCHCR1-215ENST00000488920 DHTKD1Q96HY7 919 aaPredicted RBP12.57□□□□□ -0.4
CCHCR1-215ENST00000488920 DUSP9Q99956 384 aaKnown RBP12.57□□□□□ -0.4
CCHCR1-215ENST00000488920 ARRDC1-AS1Q9H2J1 176 aa12.57□□□□□ -0.4
CCHCR1-215ENST00000488920 ZDHHC4Q9NPG8 344 aa12.57□□□□□ -0.4
CCHCR1-215ENST00000488920 MTPAPQ9NVV4 582 aaKnown RBP eCLIP12.57□□□□□ -0.4
CCHCR1-215ENST00000488920 EBF1Q9UH73 591 aa12.57□□□□□ -0.4
CCHCR1-215ENST00000488920 DNMT3LQ9UJW3 386 aa12.57□□□□□ -0.4
CCHCR1-215ENST00000488920 CDV3Q9UKY7 258 aaKnown RBP12.57□□□□□ -0.4
CCHCR1-215ENST00000488920 MMP17Q9ULZ9 603 aa12.57□□□□□ -0.4
CCHCR1-215ENST00000488920 COQ4Q9Y3A0 265 aa12.57□□□□□ -0.4
CCHCR1-215ENST00000488920 USP3Q9Y6I4 520 aa12.57□□□□□ -0.4
CCHCR1-215ENST00000488920 LOC105378220A0A1B0GUY1 285 aaPredicted RBP12.56□□□□□ -0.4
CCHCR1-215ENST00000488920 TBC1D3BA6NDS4 549 aa12.56□□□□□ -0.4
CCHCR1-215ENST00000488920 PALM2-AKAP2B1ALY0 433 aaPredicted RBP12.56□□□□□ -0.4
CCHCR1-215ENST00000488920 PPP1R3GB7ZBB8 358 aa12.56□□□□□ -0.4
CCHCR1-215ENST00000488920 BIN1O00499 593 aa12.56□□□□□ -0.4
CCHCR1-215ENST00000488920 TRIM24O15164 1050 aa12.56□□□□□ -0.4
CCHCR1-215ENST00000488920 HOXC11O43248 304 aaPredicted RBP12.56□□□□□ -0.4
CCHCR1-215ENST00000488920 TULP3O75386 442 aa12.56□□□□□ -0.4
CCHCR1-215ENST00000488920 HNRNPLP14866 589 aaKnown RBP eCLIP12.56□□□□□ -0.4
CCHCR1-215ENST00000488920 SDHBP21912 280 aa12.56□□□□□ -0.4
CCHCR1-215ENST00000488920 BMP6P22004 513 aa12.56□□□□□ -0.4
CCHCR1-215ENST00000488920 TNFRSF4P43489 277 aa12.56□□□□□ -0.4
CCHCR1-215ENST00000488920 PLA2G4AP47712 749 aa12.56□□□□□ -0.4
CCHCR1-215ENST00000488920 GOLGA8FQ08AF8 430 aa12.56□□□□□ -0.4
CCHCR1-215ENST00000488920 GOLGA8DPQ0D2H9 430 aa12.56□□□□□ -0.4
CCHCR1-215ENST00000488920 CUL2Q13617 745 aa12.56□□□□□ -0.4
CCHCR1-215ENST00000488920 CRY1Q16526 586 aa12.56□□□□□ -0.4
CCHCR1-215ENST00000488920 ARHGAP17Q68EM7 881 aa12.56□□□□□ -0.4
CCHCR1-215ENST00000488920 ANO7Q6IWH7 933 aa12.56□□□□□ -0.4
CCHCR1-215ENST00000488920 TMEM92Q6UXU6 159 aa12.56□□□□□ -0.4
CCHCR1-215ENST00000488920 PRR23CQ6ZRP0 262 aa12.56□□□□□ -0.4
CCHCR1-215ENST00000488920 TPGS1Q6ZTW0 290 aa12.56□□□□□ -0.4
CCHCR1-215ENST00000488920 CCDC186Q7Z3E2 898 aa12.56□□□□□ -0.4
CCHCR1-215ENST00000488920 PIGZQ86VD9 579 aa12.56□□□□□ -0.4
CCHCR1-215ENST00000488920 MIB1Q86YT6 1006 aa12.56□□□□□ -0.4
CCHCR1-215ENST00000488920 ETFBKMTQ8IXQ9 262 aa12.56□□□□□ -0.4
CCHCR1-215ENST00000488920 PHTF2Q8N3S3 785 aa12.56□□□□□ -0.4
CCHCR1-215ENST00000488920 IL17RCQ8NAC3 791 aa12.56□□□□□ -0.4
CCHCR1-215ENST00000488920 ANKRD52Q8NB46 1076 aa12.56□□□□□ -0.4
CCHCR1-215ENST00000488920 TXNDC5Q8NBS9 432 aaKnown RBP12.56□□□□□ -0.4
CCHCR1-215ENST00000488920 TPSD1Q9BZJ3 242 aa12.56□□□□□ -0.4
CCHCR1-215ENST00000488920 UBXN6Q9BZV1 441 aa12.56□□□□□ -0.4
CCHCR1-215ENST00000488920 DEC1Q9P2X7 70 aa12.56□□□□□ -0.4
CCHCR1-215ENST00000488920 LSM7Q9UK45 103 aaKnown RBP12.56□□□□□ -0.4
CCHCR1-215ENST00000488920 MED19A0JLT2 244 aaPredicted RBP12.55□□□□□ -0.4
CCHCR1-215ENST00000488920 DCDC2BA2VCK2 349 aa12.55□□□□□ -0.4
CCHCR1-215ENST00000488920 NEDD8-MDP1E9PL57 170 aa12.55□□□□□ -0.4
CCHCR1-215ENST00000488920 SGK1O00141 431 aa12.55□□□□□ -0.4
CCHCR1-215ENST00000488920 TULP2O00295 520 aa12.55□□□□□ -0.4
CCHCR1-215ENST00000488920 GDF9O60383 454 aa12.55□□□□□ -0.4
CCHCR1-215ENST00000488920 HMBSP08397 361 aa12.55□□□□□ -0.4
CCHCR1-215ENST00000488920 CHRM1P11229 460 aaPredicted RBP12.55□□□□□ -0.4
CCHCR1-215ENST00000488920 RALAP11233 206 aa12.55□□□□□ -0.4
CCHCR1-215ENST00000488920 KIR2DL1P43626 348 aaPredicted RBP12.55□□□□□ -0.4
CCHCR1-215ENST00000488920 FMO5P49326 533 aa12.55□□□□□ -0.4
CCHCR1-215ENST00000488920 PSEN1P49768 467 aa12.55□□□□□ -0.4
CCHCR1-215ENST00000488920 SF3A2Q15428 464 aaKnown RBP12.55□□□□□ -0.4
CCHCR1-215ENST00000488920 GOLGA7BQ2TAP0 167 aa12.55□□□□□ -0.4
CCHCR1-215ENST00000488920 PLK5Q496M5 336 aa12.55□□□□□ -0.4
CCHCR1-215ENST00000488920 CCDC40Q4G0X9 1142 aa12.55□□□□□ -0.4
CCHCR1-215ENST00000488920 TTI2Q6NXR4 508 aa12.55□□□□□ -0.4
CCHCR1-215ENST00000488920 KLHDC10Q6PID8 442 aa12.55□□□□□ -0.4
CCHCR1-215ENST00000488920 TADA2BQ86TJ2 420 aa12.55□□□□□ -0.4
CCHCR1-215ENST00000488920 NELFBQ8WX92 580 aa12.55□□□□□ -0.4
CCHCR1-215ENST00000488920 NDRG1Q92597 394 aaKnown RBP12.55□□□□□ -0.4
CCHCR1-215ENST00000488920 BHMTQ93088 406 aa12.55□□□□□ -0.4
CCHCR1-215ENST00000488920 LOXL4Q96JB6 756 aa12.55□□□□□ -0.4
CCHCR1-215ENST00000488920 ZC3H10Q96K80 434 aaKnown RBP12.55□□□□□ -0.4
CCHCR1-215ENST00000488920 CEP63Q96MT8 703 aa12.55□□□□□ -0.4
CCHCR1-215ENST00000488920 BBS2Q9BXC9 721 aa12.55□□□□□ -0.4
CCHCR1-215ENST00000488920 DUSP15Q9H1R2 295 aaPredicted RBP12.55□□□□□ -0.4
CCHCR1-215ENST00000488920 METTL14Q9HCE5 456 aaKnown RBP12.55□□□□□ -0.4
CCHCR1-215ENST00000488920 CLIC5Q9NZA1 410 aa12.55□□□□□ -0.4
CCHCR1-215ENST00000488920 ATG2BQ96BY7 2078 aa12.55□□□□□ -0.4
CCHCR1-215ENST00000488920 DNAH14Q0VDD8 3507 aa12.54□□□□□ -0.4
CCHCR1-215ENST00000488920 ADAM23O75077 832 aa12.54□□□□□ -0.4
CCHCR1-215ENST00000488920 STC2O76061 302 aa12.54□□□□□ -0.4
CCHCR1-215ENST00000488920 EPN2O95208 641 aa12.54□□□□□ -0.4
CCHCR1-215ENST00000488920 KLKB1P03952 638 aa12.54□□□□□ -0.4
CCHCR1-215ENST00000488920 TYRP14679 529 aa12.54□□□□□ -0.4
CCHCR1-215ENST00000488920 CD19P15391 556 aa12.54□□□□□ -0.4
CCHCR1-215ENST00000488920 GBP1P32455 592 aa12.54□□□□□ -0.4
CCHCR1-215ENST00000488920 TKTL1P51854 596 aa12.54□□□□□ -0.4
CCHCR1-215ENST00000488920 STX17P56962 302 aa12.54□□□□□ -0.4
CCHCR1-215ENST00000488920 SLC8A3P57103 927 aa12.54□□□□□ -0.4
CCHCR1-215ENST00000488920 PDE4CQ08493 712 aa12.54□□□□□ -0.4
Retrieved 100 of 20,778 RNA–protein pairs in 28.1 ms