RNA–Protein interactions for RNA: ENST00000488320.1

COL17A1-207, Transcript of collagen type XVII alpha 1 chain, humanhuman

TSL 5

Gene COL17A1, Length 626 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL17A1-207ENST00000488320 LAD1O00515 517 aa9.85□□□□□ -0.83
COL17A1-207ENST00000488320 GABRDO14764 452 aa9.85□□□□□ -0.83
COL17A1-207ENST00000488320 YWHAQP27348 245 aa9.85□□□□□ -0.83
COL17A1-207ENST00000488320 AFF3P51826 1226 aaKnown RBP9.85□□□□□ -0.83
COL17A1-207ENST00000488320 NOP14P78316 857 aaKnown RBP9.85□□□□□ -0.83
COL17A1-207ENST00000488320 GTF2BQ00403 316 aa9.85□□□□□ -0.83
COL17A1-207ENST00000488320 POU5F1Q01860 360 aaKnown RBP9.85□□□□□ -0.83
COL17A1-207ENST00000488320 TARDBPQ13148 414 aaKnown RBP eCLIP9.85□□□□□ -0.83
COL17A1-207ENST00000488320 POSTNQ15063 836 aa9.85□□□□□ -0.83
COL17A1-207ENST00000488320 IL17AQ16552 155 aa9.85□□□□□ -0.83
COL17A1-207ENST00000488320 PTPRNQ16849 979 aa9.85□□□□□ -0.83
COL17A1-207ENST00000488320 SOWAHAQ2M3V2 549 aa9.85□□□□□ -0.83
COL17A1-207ENST00000488320 INAVAQ3KP66 663 aa9.85□□□□□ -0.83
COL17A1-207ENST00000488320 HECTD3Q5T447 861 aa9.85□□□□□ -0.83
COL17A1-207ENST00000488320 CRELD2Q6UXH1 353 aaPredicted RBP9.85□□□□□ -0.83
COL17A1-207ENST00000488320 TPGS1Q6ZTW0 290 aa9.85□□□□□ -0.83
COL17A1-207ENST00000488320 GPBP1Q86WP2 473 aa9.85□□□□□ -0.83
COL17A1-207ENST00000488320 TMPRSS6Q8IU80 811 aa9.85□□□□□ -0.83
COL17A1-207ENST00000488320 LRRC52Q8N7C0 313 aa9.85□□□□□ -0.83
COL17A1-207ENST00000488320 C1orf127Q8N9H9 656 aa9.85□□□□□ -0.83
COL17A1-207ENST00000488320 FAM181AQ8N9Y4 354 aa9.85□□□□□ -0.83
COL17A1-207ENST00000488320 NOC3LQ8WTT2 800 aaKnown RBP9.85□□□□□ -0.83
COL17A1-207ENST00000488320 PRCCQ92733 491 aaPredicted RBP9.85□□□□□ -0.83
COL17A1-207ENST00000488320 FGF11Q92914 225 aa9.85□□□□□ -0.83
COL17A1-207ENST00000488320 KCNN1Q92952 543 aa9.85□□□□□ -0.83
COL17A1-207ENST00000488320 SIPA1Q96FS4 1042 aa9.85□□□□□ -0.83
COL17A1-207ENST00000488320 C8orf48Q96LL4 319 aa9.85□□□□□ -0.83
COL17A1-207ENST00000488320 REEP2Q9BRK0 252 aa9.85□□□□□ -0.83
COL17A1-207ENST00000488320 FAM213AQ9BRX8 229 aa9.85□□□□□ -0.83
COL17A1-207ENST00000488320 BBS2Q9BXC9 721 aa9.85□□□□□ -0.83
COL17A1-207ENST00000488320 CD248Q9HCU0 757 aa9.85□□□□□ -0.83
COL17A1-207ENST00000488320 CRTAC1Q9NQ79 661 aa9.85□□□□□ -0.83
COL17A1-207ENST00000488320 WDR35Q9P2L0 1181 aa9.85□□□□□ -0.83
COL17A1-207ENST00000488320 ANKRD6Q9Y2G4 727 aa9.85□□□□□ -0.83
COL17A1-207ENST00000488320 B8ZZF3 427 aa9.84□□□□□ -0.83
COL17A1-207ENST00000488320 COCHO43405 550 aa9.84□□□□□ -0.83
COL17A1-207ENST00000488320 SYNCRIPO60506 623 aaKnown RBP9.84□□□□□ -0.83
COL17A1-207ENST00000488320 LDOC1O95751 146 aaPredicted RBP9.84□□□□□ -0.83
COL17A1-207ENST00000488320 TMEM191BP0C7N4 346 aa9.84□□□□□ -0.83
COL17A1-207ENST00000488320 TYRP14679 529 aa9.84□□□□□ -0.83
COL17A1-207ENST00000488320 ACTN2P35609 894 aa9.84□□□□□ -0.83
COL17A1-207ENST00000488320 PRPHP41219 470 aa9.84□□□□□ -0.83
COL17A1-207ENST00000488320 DGKGP49619 791 aa9.84□□□□□ -0.83
COL17A1-207ENST00000488320 CCT8P50990 548 aa9.84□□□□□ -0.83
COL17A1-207ENST00000488320 TPMTP51580 245 aa9.84□□□□□ -0.83
COL17A1-207ENST00000488320 CLDN6P56747 220 aa9.84□□□□□ -0.83
COL17A1-207ENST00000488320 IL9RQ01113 521 aa9.84□□□□□ -0.83
COL17A1-207ENST00000488320 FUT11Q495W5 492 aa9.84□□□□□ -0.83
COL17A1-207ENST00000488320 MDH1BQ5I0G3 518 aa9.84□□□□□ -0.83
COL17A1-207ENST00000488320 HYIQ5T013 277 aa9.84□□□□□ -0.83
COL17A1-207ENST00000488320 DPH6Q7L8W6 267 aa9.84□□□□□ -0.83
COL17A1-207ENST00000488320 ADAT2Q7Z6V5 191 aaKnown RBP9.84□□□□□ -0.83
COL17A1-207ENST00000488320 FAM124AQ86V42 546 aa9.84□□□□□ -0.83
COL17A1-207ENST00000488320 NUP93Q8N1F7 819 aa9.84□□□□□ -0.83
COL17A1-207ENST00000488320 PDZD8Q8NEN9 1154 aa9.84□□□□□ -0.83
COL17A1-207ENST00000488320 FBXO32Q969P5 355 aa9.84□□□□□ -0.83
COL17A1-207ENST00000488320 PCED1BQ96HM7 432 aa9.84□□□□□ -0.83
COL17A1-207ENST00000488320 TMEM176AQ96HP8 235 aa9.84□□□□□ -0.83
COL17A1-207ENST00000488320 HNRNPABQ99729 332 aaKnown RBP9.84□□□□□ -0.83
COL17A1-207ENST00000488320 USP36Q9P275 1121 aaKnown RBP9.84□□□□□ -0.83
COL17A1-207ENST00000488320 ITGA11Q9UKX5 1188 aa9.84□□□□□ -0.83
COL17A1-207ENST00000488320 STON1Q9Y6Q2 735 aa9.84□□□□□ -0.83
COL17A1-207ENST00000488320 CABIN1Q9Y6J0 2220 aa9.84□□□□□ -0.83
COL17A1-207ENST00000488320 MYH10P35580 1976 aa9.83□□□□□ -0.84
COL17A1-207ENST00000488320 ENC1O14682 589 aa9.83□□□□□ -0.84
COL17A1-207ENST00000488320 TBCAO75347 108 aaKnown RBP9.83□□□□□ -0.84
COL17A1-207ENST00000488320 RTN3O95197 1032 aaPredicted RBP9.83□□□□□ -0.84
COL17A1-207ENST00000488320 WISP1O95388 367 aa9.83□□□□□ -0.84
COL17A1-207ENST00000488320 LDHAP00338 332 aaKnown RBP9.83□□□□□ -0.84
COL17A1-207ENST00000488320 CDK4P11802 303 aa9.83□□□□□ -0.84
COL17A1-207ENST00000488320 GNL1P36915 607 aaPredicted RBP9.83□□□□□ -0.84
COL17A1-207ENST00000488320 RHDQ02161 417 aa9.83□□□□□ -0.84
COL17A1-207ENST00000488320 BROXQ5VW32 411 aa9.83□□□□□ -0.84
COL17A1-207ENST00000488320 SCARA3Q6AZY7 606 aa9.83□□□□□ -0.84
COL17A1-207ENST00000488320 PCSK4Q6UW60 755 aa9.83□□□□□ -0.84
COL17A1-207ENST00000488320 CACUL1Q86Y37 369 aa9.83□□□□□ -0.84
COL17A1-207ENST00000488320 FAM184AQ8NB25 1140 aa9.83□□□□□ -0.84
COL17A1-207ENST00000488320 SNIP1Q8TAD8 396 aaKnown RBP9.83□□□□□ -0.84
COL17A1-207ENST00000488320 MYCBPAPQ8TBZ2 947 aa9.83□□□□□ -0.84
COL17A1-207ENST00000488320 IGSF8Q969P0 613 aa9.83□□□□□ -0.84
COL17A1-207ENST00000488320 SAAL1Q96ER3 474 aa9.83□□□□□ -0.84
COL17A1-207ENST00000488320 HPDLQ96IR7 371 aa9.83□□□□□ -0.84
COL17A1-207ENST00000488320 ANKRD36BP1Q96IX9 119 aa9.83□□□□□ -0.84
COL17A1-207ENST00000488320 CNDP2Q96KP4 475 aaKnown RBP9.83□□□□□ -0.84
COL17A1-207ENST00000488320 ZFRQ96KR1 1074 aaKnown RBP9.83□□□□□ -0.84
COL17A1-207ENST00000488320 MMS19Q96T76 1030 aa9.83□□□□□ -0.84
COL17A1-207ENST00000488320 LGMNQ99538 433 aa9.83□□□□□ -0.84
COL17A1-207ENST00000488320 NRSN2Q9GZP1 204 aa9.83□□□□□ -0.84
COL17A1-207ENST00000488320 MKRN2Q9H000 416 aaKnown RBP9.83□□□□□ -0.84
COL17A1-207ENST00000488320 SNX25Q9H3E2 840 aa9.83□□□□□ -0.84
COL17A1-207ENST00000488320 UTP3Q9NQZ2 479 aaKnown RBP eCLIP9.83□□□□□ -0.84
COL17A1-207ENST00000488320 RBAKQ9NYW8 714 aaPredicted RBP9.83□□□□□ -0.84
COL17A1-207ENST00000488320 PCDHGA1Q9Y5H4 931 aa9.83□□□□□ -0.84
COL17A1-207ENST00000488320 STYXL1Q9Y6J8 313 aa9.83□□□□□ -0.84
COL17A1-207ENST00000488320 MYLKQ15746 1914 aa9.83□□□□□ -0.84
COL17A1-207ENST00000488320 MYO18BQ8IUG5 2567 aa9.83□□□□□ -0.84
COL17A1-207ENST00000488320 KNL1Q8NG31 2342 aa9.82□□□□□ -0.84
COL17A1-207ENST00000488320 VWA3AA6NCI4 1184 aa9.82□□□□□ -0.84
COL17A1-207ENST00000488320 H0Y8X5 98 aa9.82□□□□□ -0.84
COL17A1-207ENST00000488320 SLC28A2O43868 658 aa9.82□□□□□ -0.84
Retrieved 100 of 20,778 RNA–protein pairs in 32.7 ms