RNA–Protein interactions for RNA: ENST00000488087.1

ECHDC1-217, Transcript of ethylmalonyl-CoA decarboxylase 1, humanhuman

TSL 3

Gene ECHDC1, Length 473 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ECHDC1-217ENST00000488087 SKAP2O75563 359 aaPredicted RBP4.52□□□□□ -1.69
ECHDC1-217ENST00000488087 PDE8BO95263 885 aa4.52□□□□□ -1.69
ECHDC1-217ENST00000488087 VIPP01282 170 aa4.52□□□□□ -1.69
ECHDC1-217ENST00000488087 ARP10275 920 aa4.52□□□□□ -1.69
ECHDC1-217ENST00000488087 DRD4P21917 467 aa4.52□□□□□ -1.69
ECHDC1-217ENST00000488087 HMGA2P52926 109 aa4.52□□□□□ -1.69
ECHDC1-217ENST00000488087 EIF4A1P60842 406 aaKnown RBP4.52□□□□□ -1.69
ECHDC1-217ENST00000488087 ICA1Q05084 483 aa4.52□□□□□ -1.69
ECHDC1-217ENST00000488087 TRIM14Q14142 442 aa4.52□□□□□ -1.69
ECHDC1-217ENST00000488087 KRT72Q14CN4 511 aa4.52□□□□□ -1.69
ECHDC1-217ENST00000488087 PWP2Q15269 919 aaKnown RBP4.52□□□□□ -1.69
ECHDC1-217ENST00000488087 MAPKAPK3Q16644 382 aa4.52□□□□□ -1.69
ECHDC1-217ENST00000488087 ST3GAL2Q16842 350 aa4.52□□□□□ -1.69
ECHDC1-217ENST00000488087 AARS2Q5JTZ9 985 aaKnown RBP4.52□□□□□ -1.69
ECHDC1-217ENST00000488087 ARL6IP4Q66PJ3 421 aaKnown RBP4.52□□□□□ -1.69
ECHDC1-217ENST00000488087 DENND2CQ68D51 928 aa4.52□□□□□ -1.69
ECHDC1-217ENST00000488087 ABLIM2Q6H8Q1 611 aa4.52□□□□□ -1.69
ECHDC1-217ENST00000488087 NAPRTQ6XQN6 538 aa4.52□□□□□ -1.69
ECHDC1-217ENST00000488087 SLC29A4Q7RTT9 530 aa4.52□□□□□ -1.69
ECHDC1-217ENST00000488087 ZNF804AQ7Z570 1209 aa4.52□□□□□ -1.69
ECHDC1-217ENST00000488087 RASGRP3Q8IV61 690 aa4.52□□□□□ -1.69
ECHDC1-217ENST00000488087 P3H2Q8IVL5 708 aa4.52□□□□□ -1.69
ECHDC1-217ENST00000488087 ZNF384Q8TF68 577 aa4.52□□□□□ -1.69
ECHDC1-217ENST00000488087 UROC1Q96N76 676 aa4.52□□□□□ -1.69
ECHDC1-217ENST00000488087 AGAP2Q99490 1192 aa4.52□□□□□ -1.69
ECHDC1-217ENST00000488087 GDF15Q99988 308 aa4.52□□□□□ -1.69
ECHDC1-217ENST00000488087 FSD1LQ9BXM9 530 aa4.52□□□□□ -1.69
ECHDC1-217ENST00000488087 TRIM36Q9NQ86 728 aa4.52□□□□□ -1.69
ECHDC1-217ENST00000488087 GABRQQ9UN88 632 aa4.52□□□□□ -1.69
ECHDC1-217ENST00000488087 INSL6Q9Y581 213 aa4.52□□□□□ -1.69
ECHDC1-217ENST00000488087 ENTPD2Q9Y5L3 495 aa4.52□□□□□ -1.69
ECHDC1-217ENST00000488087 GOLGA6L3A6NEY3 463 aa4.51□□□□□ -1.69
ECHDC1-217ENST00000488087 NUDT3O95989 172 aa4.51□□□□□ -1.69
ECHDC1-217ENST00000488087 TMEM225BP0DP42 221 aa4.51□□□□□ -1.69
ECHDC1-217ENST00000488087 GPD1P21695 349 aa4.51□□□□□ -1.69
ECHDC1-217ENST00000488087 SLC5A2P31639 672 aa4.51□□□□□ -1.69
ECHDC1-217ENST00000488087 NSUN2Q08J23 767 aaKnown RBP eCLIP4.51□□□□□ -1.69
ECHDC1-217ENST00000488087 CLCA4Q14CN2 919 aa4.51□□□□□ -1.69
ECHDC1-217ENST00000488087 PUM3Q15397 648 aaKnown RBP4.51□□□□□ -1.69
ECHDC1-217ENST00000488087 ELF2Q15723 593 aa4.51□□□□□ -1.69
ECHDC1-217ENST00000488087 P3H1Q32P28 736 aa4.51□□□□□ -1.69
ECHDC1-217ENST00000488087 TMTC4Q5T4D3 741 aa4.51□□□□□ -1.69
ECHDC1-217ENST00000488087 STRIP1Q5VSL9 837 aa4.51□□□□□ -1.69
ECHDC1-217ENST00000488087 MTHFD1LQ6UB35 978 aa4.51□□□□□ -1.69
ECHDC1-217ENST00000488087 PCSK4Q6UW60 755 aa4.51□□□□□ -1.69
ECHDC1-217ENST00000488087 PTCHD4Q6ZW05 846 aa4.51□□□□□ -1.69
ECHDC1-217ENST00000488087 AMIGO2Q86SJ2 522 aa4.51□□□□□ -1.69
ECHDC1-217ENST00000488087 ARHGEF25Q86VW2 580 aa4.51□□□□□ -1.69
ECHDC1-217ENST00000488087 TTC30AQ86WT1 665 aa4.51□□□□□ -1.69
ECHDC1-217ENST00000488087 SUN3Q8TAQ9 357 aa4.51□□□□□ -1.69
ECHDC1-217ENST00000488087 TBC1D5Q92609 795 aa4.51□□□□□ -1.69
ECHDC1-217ENST00000488087 PRPF18Q99633 342 aaKnown RBP4.51□□□□□ -1.69
ECHDC1-217ENST00000488087 ARPC5LQ9BPX5 153 aa4.51□□□□□ -1.69
ECHDC1-217ENST00000488087 KLK15Q9H2R5 256 aa4.51□□□□□ -1.69
ECHDC1-217ENST00000488087 EPS8L2Q9H6S3 715 aa4.51□□□□□ -1.69
ECHDC1-217ENST00000488087 RIOX1Q9H6W3 641 aa4.51□□□□□ -1.69
ECHDC1-217ENST00000488087 SNX15Q9NRS6 342 aa4.51□□□□□ -1.69
ECHDC1-217ENST00000488087 MGAT4CQ9UBM8 478 aa4.51□□□□□ -1.69
ECHDC1-217ENST00000488087 LPAR3Q9UBY5 353 aa4.51□□□□□ -1.69
ECHDC1-217ENST00000488087 AQP12BA6NM10 295 aa4.5□□□□□ -1.69
ECHDC1-217ENST00000488087 M0R3H8 397 aa4.5□□□□□ -1.69
ECHDC1-217ENST00000488087 SPRY2O43597 315 aa4.5□□□□□ -1.69
ECHDC1-217ENST00000488087 EXOC3O60645 756 aa4.5□□□□□ -1.69
ECHDC1-217ENST00000488087 USP1O94782 785 aa4.5□□□□□ -1.69
ECHDC1-217ENST00000488087 WDR47O94967 919 aa4.5□□□□□ -1.69
ECHDC1-217ENST00000488087 TJP3O95049 919 aa4.5□□□□□ -1.69
ECHDC1-217ENST00000488087 HNRNPCP07910 306 aaKnown RBP eCLIP4.5□□□□□ -1.69
ECHDC1-217ENST00000488087 MYCLP12524 364 aaPredicted RBP4.5□□□□□ -1.69
ECHDC1-217ENST00000488087 DRD1P21728 446 aa4.5□□□□□ -1.69
ECHDC1-217ENST00000488087 BMP5P22003 454 aa4.5□□□□□ -1.69
ECHDC1-217ENST00000488087 FPR3P25089 353 aa4.5□□□□□ -1.69
ECHDC1-217ENST00000488087 HTR7P34969 479 aa4.5□□□□□ -1.69
ECHDC1-217ENST00000488087 TRAPPC10P48553 1259 aa4.5□□□□□ -1.69
ECHDC1-217ENST00000488087 PTH2RP49190 550 aa4.5□□□□□ -1.69
ECHDC1-217ENST00000488087 ATP1A4Q13733 1029 aa4.5□□□□□ -1.69
ECHDC1-217ENST00000488087 GRAMD1BQ3KR37 738 aa4.5□□□□□ -1.69
ECHDC1-217ENST00000488087 CEP85Q6P2H3 762 aa4.5□□□□□ -1.69
ECHDC1-217ENST00000488087 GATAD2AQ86YP4 633 aa4.5□□□□□ -1.69
ECHDC1-217ENST00000488087 ATG16L2Q8NAA4 619 aa4.5□□□□□ -1.69
ECHDC1-217ENST00000488087 LTV1Q96GA3 475 aaPredicted RBP4.5□□□□□ -1.69
ECHDC1-217ENST00000488087 WDYHV1Q96HA8 205 aa4.5□□□□□ -1.69
ECHDC1-217ENST00000488087 LENG8Q96PV6 779 aaPredicted RBP4.5□□□□□ -1.69
ECHDC1-217ENST00000488087 OBP2BQ9NPH6 170 aa4.5□□□□□ -1.69
ECHDC1-217ENST00000488087 TFCP2L1Q9NZI6 479 aa4.5□□□□□ -1.69
ECHDC1-217ENST00000488087 SH3BP4Q9P0V3 963 aa4.5□□□□□ -1.69
ECHDC1-217ENST00000488087 LRFN1Q9P244 771 aa4.5□□□□□ -1.69
ECHDC1-217ENST00000488087 IGSF9Q9P2J2 1179 aa4.5□□□□□ -1.69
ECHDC1-217ENST00000488087 CA14Q9ULX7 337 aa4.5□□□□□ -1.69
ECHDC1-217ENST00000488087 COL15A1P39059 1388 aa4.5□□□□□ -1.69
ECHDC1-217ENST00000488087 LGALS16A8MUM7 142 aa4.49□□□□□ -1.69
ECHDC1-217ENST00000488087 A8MVJ9 347 aa4.49□□□□□ -1.69
ECHDC1-217ENST00000488087 J3KTA2 159 aa4.49□□□□□ -1.69
ECHDC1-217ENST00000488087 TMPRSS11DO60235 418 aa4.49□□□□□ -1.69
ECHDC1-217ENST00000488087 GLP2RO95838 553 aa4.49□□□□□ -1.69
ECHDC1-217ENST00000488087 FGAP02671 866 aa4.49□□□□□ -1.69
ECHDC1-217ENST00000488087 ALDH18A1P54886 795 aaKnown RBP4.49□□□□□ -1.69
ECHDC1-217ENST00000488087 SOX10P56693 466 aa4.49□□□□□ -1.69
ECHDC1-217ENST00000488087 CYP4F2P78329 520 aa4.49□□□□□ -1.69
ECHDC1-217ENST00000488087 PSG6Q00889 435 aa4.49□□□□□ -1.69
ECHDC1-217ENST00000488087 BFSP2Q13515 415 aa4.49□□□□□ -1.69
Retrieved 100 of 20,778 RNA–protein pairs in 48.8 ms