RNA–Protein interactions for RNA: ENST00000487825.5

BRCA1-217, Transcript of BRCA1, DNA repair associated, humanhuman

TSL 5

Gene BRCA1, Length 800 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCA1-217ENST00000487825 COG5Q9UP83 839 aa5.67□□□□□ -1.5
BRCA1-217ENST00000487825 AGTPBP1Q9UPW5 1226 aa5.67□□□□□ -1.5
BRCA1-217ENST00000487825 FAM186AA6NE01 2351 aa5.67□□□□□ -1.5
BRCA1-217ENST00000487825 COL11A1P12107 1806 aaPredicted RBP5.67□□□□□ -1.5
BRCA1-217ENST00000487825 HAUS5O94927 633 aa5.66□□□□□ -1.5
BRCA1-217ENST00000487825 AGFG2O95081 481 aa5.66□□□□□ -1.5
BRCA1-217ENST00000487825 IGHMBP2P38935 993 aaKnown RBP5.66□□□□□ -1.5
BRCA1-217ENST00000487825 VAV2P52735 878 aa5.66□□□□□ -1.5
BRCA1-217ENST00000487825 CDC42EP1Q00587 391 aa5.66□□□□□ -1.5
BRCA1-217ENST00000487825 FPGSQ05932 587 aa5.66□□□□□ -1.5
BRCA1-217ENST00000487825 C3orf36Q3SXR2 165 aa5.66□□□□□ -1.5
BRCA1-217ENST00000487825 CC2D1BQ5T0F9 858 aaKnown RBP5.66□□□□□ -1.5
BRCA1-217ENST00000487825 UTP14CQ5TAP6 766 aaKnown RBP5.66□□□□□ -1.5
BRCA1-217ENST00000487825 FBXO42Q6P3S6 717 aa5.66□□□□□ -1.5
BRCA1-217ENST00000487825 RD3Q7Z3Z2 195 aa5.66□□□□□ -1.5
BRCA1-217ENST00000487825 PRIMA1Q86XR5 153 aa5.66□□□□□ -1.5
BRCA1-217ENST00000487825 COLGALT2Q8IYK4 626 aa5.66□□□□□ -1.5
BRCA1-217ENST00000487825 IFI44Q8TCB0 444 aa5.66□□□□□ -1.5
BRCA1-217ENST00000487825 KAT5Q92993 513 aa5.66□□□□□ -1.5
BRCA1-217ENST00000487825 TEKT5Q96M29 485 aa5.66□□□□□ -1.5
BRCA1-217ENST00000487825 TLR10Q9BXR5 811 aa5.66□□□□□ -1.5
BRCA1-217ENST00000487825 BABAM1Q9NWV8 329 aa5.66□□□□□ -1.5
BRCA1-217ENST00000487825 TMOD2Q9NZR1 351 aa5.66□□□□□ -1.5
BRCA1-217ENST00000487825 DDX20Q9UHI6 824 aaKnown RBP5.66□□□□□ -1.5
BRCA1-217ENST00000487825 CDYLQ9Y232 598 aa5.66□□□□□ -1.5
BRCA1-217ENST00000487825 NUDCQ9Y266 331 aa5.66□□□□□ -1.5
BRCA1-217ENST00000487825 AFG3L2Q9Y4W6 797 aa5.66□□□□□ -1.5
BRCA1-217ENST00000487825 IPPQ9Y573 584 aa5.66□□□□□ -1.5
BRCA1-217ENST00000487825 INSL6Q9Y581 213 aa5.66□□□□□ -1.5
BRCA1-217ENST00000487825 MRFAP1Q9Y605 127 aa5.66□□□□□ -1.5
BRCA1-217ENST00000487825 ZFHX2Q9C0A1 2572 aaPredicted RBP5.66□□□□□ -1.5
BRCA1-217ENST00000487825 PTPRZ1P23471 2315 aaPredicted RBP5.66□□□□□ -1.5
BRCA1-217ENST00000487825 CACNA1HO95180 2353 aa5.66□□□□□ -1.5
BRCA1-217ENST00000487825 MYH2Q9UKX2 1941 aa5.66□□□□□ -1.5
BRCA1-217ENST00000487825 TECTAO75443 2155 aa5.65□□□□□ -1.5
BRCA1-217ENST00000487825 TRGV11A0A075B6L2 103 aa5.65□□□□□ -1.5
BRCA1-217ENST00000487825 MYADML2A6NDP7 307 aa5.65□□□□□ -1.5
BRCA1-217ENST00000487825 CCDC154A6NI56 674 aa5.65□□□□□ -1.5
BRCA1-217ENST00000487825 SNAP23O00161 211 aa5.65□□□□□ -1.5
BRCA1-217ENST00000487825 GABRDO14764 452 aa5.65□□□□□ -1.5
BRCA1-217ENST00000487825 HTRA2O43464 458 aaPredicted RBP5.65□□□□□ -1.5
BRCA1-217ENST00000487825 CLTBP09497 229 aa5.65□□□□□ -1.5
BRCA1-217ENST00000487825 MTHFD1P11586 935 aaKnown RBP5.65□□□□□ -1.5
BRCA1-217ENST00000487825 ALADP13716 330 aa5.65□□□□□ -1.5
BRCA1-217ENST00000487825 EDNRBP24530 442 aa5.65□□□□□ -1.5
BRCA1-217ENST00000487825 CHRNDQ07001 517 aa5.65□□□□□ -1.5
BRCA1-217ENST00000487825 CCL14Q16627 93 aa5.65□□□□□ -1.5
BRCA1-217ENST00000487825 PABPC1LQ4VXU2 614 aaKnown RBP5.65□□□□□ -1.5
BRCA1-217ENST00000487825 TREML2Q5T2D2 321 aa5.65□□□□□ -1.5
BRCA1-217ENST00000487825 CCDC129Q6ZRS4 1044 aa5.65□□□□□ -1.5
BRCA1-217ENST00000487825 SCYL3Q8IZE3 742 aa5.65□□□□□ -1.5
BRCA1-217ENST00000487825 USP6NLQ92738 828 aa5.65□□□□□ -1.5
BRCA1-217ENST00000487825 ZNF764Q96H86 408 aaPredicted RBP5.65□□□□□ -1.5
BRCA1-217ENST00000487825 CLPTM1LQ96KA5 538 aa5.65□□□□□ -1.5
BRCA1-217ENST00000487825 CFAP53Q96M91 514 aa5.65□□□□□ -1.5
BRCA1-217ENST00000487825 MED15Q96RN5 788 aa5.65□□□□□ -1.5
BRCA1-217ENST00000487825 KIAA1586Q9HCI6 787 aa5.65□□□□□ -1.5
BRCA1-217ENST00000487825 CWC25Q9NXE8 425 aaPredicted RBP5.65□□□□□ -1.5
BRCA1-217ENST00000487825 LRIT1Q9P2V4 623 aa5.65□□□□□ -1.5
BRCA1-217ENST00000487825 DBF4Q9UBU7 674 aaPredicted RBP5.65□□□□□ -1.5
BRCA1-217ENST00000487825 MORF4L1Q9UBU8 362 aa5.65□□□□□ -1.5
BRCA1-217ENST00000487825 TLK1Q9UKI8 766 aa5.65□□□□□ -1.5
BRCA1-217ENST00000487825 ZHX2Q9Y6X8 837 aa5.65□□□□□ -1.5
BRCA1-217ENST00000487825 ZNFX1Q9P2E3 1918 aaKnown RBP5.65□□□□□ -1.51
BRCA1-217ENST00000487825 UTYO14607 1347 aa5.65□□□□□ -1.51
BRCA1-217ENST00000487825 RIF1Q5UIP0 2472 aaKnown RBP5.65□□□□□ -1.51
BRCA1-217ENST00000487825 CHD6Q8TD26 2715 aa5.64□□□□□ -1.51
BRCA1-217ENST00000487825 TPRP12270 2363 aaKnown RBP5.64□□□□□ -1.51
BRCA1-217ENST00000487825 MASP2O00187 686 aa5.64□□□□□ -1.51
BRCA1-217ENST00000487825 MGST3O14880 152 aa5.64□□□□□ -1.51
BRCA1-217ENST00000487825 CD1AP06126 327 aa5.64□□□□□ -1.51
BRCA1-217ENST00000487825 RGS2P41220 211 aa5.64□□□□□ -1.51
BRCA1-217ENST00000487825 SIM1P81133 766 aaPredicted RBP5.64□□□□□ -1.51
BRCA1-217ENST00000487825 MRPS35P82673 323 aaKnown RBP5.64□□□□□ -1.51
BRCA1-217ENST00000487825 ZNF169Q14929 603 aaPredicted RBP5.64□□□□□ -1.51
BRCA1-217ENST00000487825 RAB30Q15771 203 aa5.64□□□□□ -1.51
BRCA1-217ENST00000487825 UAP1L1Q3KQV9 507 aa5.64□□□□□ -1.51
BRCA1-217ENST00000487825 FLYWCH1Q4VC44 716 aa5.64□□□□□ -1.51
BRCA1-217ENST00000487825 Q8NA96 180 aa5.64□□□□□ -1.51
BRCA1-217ENST00000487825 PRPF38AQ8NAV1 312 aaKnown RBP5.64□□□□□ -1.51
BRCA1-217ENST00000487825 PRSS33Q8NF86 280 aa5.64□□□□□ -1.51
BRCA1-217ENST00000487825 CAGE1Q8TC20 777 aa5.64□□□□□ -1.51
BRCA1-217ENST00000487825 SSH3Q8TE77 659 aa5.64□□□□□ -1.51
BRCA1-217ENST00000487825 NTN5Q8WTR8 489 aaPredicted RBP5.64□□□□□ -1.51
BRCA1-217ENST00000487825 SLC9A6Q92581 669 aa5.64□□□□□ -1.51
BRCA1-217ENST00000487825 TEKT1Q969V4 418 aa5.64□□□□□ -1.51
BRCA1-217ENST00000487825 TMEM125Q96AQ2 219 aa5.64□□□□□ -1.51
BRCA1-217ENST00000487825 MPHOSPH8Q99549 860 aa5.64□□□□□ -1.51
BRCA1-217ENST00000487825 MYD88Q99836 296 aa5.64□□□□□ -1.51
BRCA1-217ENST00000487825 PACSIN1Q9BY11 444 aa5.64□□□□□ -1.51
BRCA1-217ENST00000487825 HYPKQ9NX55 129 aa5.64□□□□□ -1.51
BRCA1-217ENST00000487825 VSX1Q9NZR4 365 aaPredicted RBP5.64□□□□□ -1.51
BRCA1-217ENST00000487825 SERPINB13Q9UIV8 391 aa5.64□□□□□ -1.51
BRCA1-217ENST00000487825 SLC45A2Q9UMX9 530 aa5.64□□□□□ -1.51
BRCA1-217ENST00000487825 DMTF1Q9Y222 760 aa5.64□□□□□ -1.51
BRCA1-217ENST00000487825 PCDHB1Q9Y5F3 818 aa5.64□□□□□ -1.51
BRCA1-217ENST00000487825 CDK5RAP2Q96SN8 1893 aa5.64□□□□□ -1.51
BRCA1-217ENST00000487825 PTPRSQ13332 1948 aa5.64□□□□□ -1.51
BRCA1-217ENST00000487825 SIP14410 1827 aa5.63□□□□□ -1.51
BRCA1-217ENST00000487825 ATRXP46100 2492 aa5.63□□□□□ -1.51
Retrieved 100 of 20,778 RNA–protein pairs in 26.7 ms