RNA–Protein interactions for RNA: ENST00000487709.1

HMGB1P36-201, Transcript of high mobility group box 1 pseudogene 36, humanhuman

BASIC

Gene HMGB1P36, Length 576 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P36-201ENST00000487709 CRB3Q9BUF7 120 aa4.41□□□□□ -1.7
HMGB1P36-201ENST00000487709 TRIM5Q9C035 493 aa4.41□□□□□ -1.7
HMGB1P36-201ENST00000487709 SLC25A32Q9H2D1 315 aa4.41□□□□□ -1.7
HMGB1P36-201ENST00000487709 KLC4Q9NSK0 619 aa4.41□□□□□ -1.7
HMGB1P36-201ENST00000487709 CDC23Q9UJX2 597 aa4.41□□□□□ -1.7
HMGB1P36-201ENST00000487709 CA14Q9ULX7 337 aa4.41□□□□□ -1.7
HMGB1P36-201ENST00000487709 CAPN11Q9UMQ6 739 aa4.41□□□□□ -1.7
HMGB1P36-201ENST00000487709 SH2B3Q9UQQ2 575 aa4.41□□□□□ -1.7
HMGB1P36-201ENST00000487709 HPSEQ9Y251 543 aa4.41□□□□□ -1.7
HMGB1P36-201ENST00000487709 TBC1D30Q9Y2I9 924 aa4.41□□□□□ -1.7
HMGB1P36-201ENST00000487709 MRPS17Q9Y2R5 130 aaKnown RBP4.41□□□□□ -1.7
HMGB1P36-201ENST00000487709 A0A087WV62 115 aa4.4□□□□□ -1.71
HMGB1P36-201ENST00000487709 FAM234BA2RU67 622 aa4.4□□□□□ -1.71
HMGB1P36-201ENST00000487709 GOLGA6L3A6NEY3 463 aa4.4□□□□□ -1.71
HMGB1P36-201ENST00000487709 CD3EAPO15446 510 aaKnown RBP4.4□□□□□ -1.71
HMGB1P36-201ENST00000487709 URI1O94763 535 aaPredicted RBP4.4□□□□□ -1.71
HMGB1P36-201ENST00000487709 GLP2RO95838 553 aa4.4□□□□□ -1.71
HMGB1P36-201ENST00000487709 PRKCBP05771 671 aa4.4□□□□□ -1.71
HMGB1P36-201ENST00000487709 CBSLP0DN79 551 aa4.4□□□□□ -1.71
HMGB1P36-201ENST00000487709 RBL1P28749 1068 aa4.4□□□□□ -1.71
HMGB1P36-201ENST00000487709 EPHB2P29323 1055 aa4.4□□□□□ -1.71
HMGB1P36-201ENST00000487709 MPGP29372 298 aa4.4□□□□□ -1.71
HMGB1P36-201ENST00000487709 SERPINB3P29508 390 aa4.4□□□□□ -1.71
HMGB1P36-201ENST00000487709 SLC5A2P31639 672 aa4.4□□□□□ -1.71
HMGB1P36-201ENST00000487709 CBSP35520 551 aa4.4□□□□□ -1.71
HMGB1P36-201ENST00000487709 RGS19P49795 217 aa4.4□□□□□ -1.71
HMGB1P36-201ENST00000487709 BCAT1P54687 386 aa4.4□□□□□ -1.71
HMGB1P36-201ENST00000487709 POLE2P56282 527 aa4.4□□□□□ -1.71
HMGB1P36-201ENST00000487709 SUMO2P61956 95 aaKnown RBP4.4□□□□□ -1.71
HMGB1P36-201ENST00000487709 NSUN2Q08J23 767 aaKnown RBP eCLIP4.4□□□□□ -1.71
HMGB1P36-201ENST00000487709 BMPR2Q13873 1038 aa4.4□□□□□ -1.71
HMGB1P36-201ENST00000487709 BOP1Q14137 746 aaKnown RBP4.4□□□□□ -1.71
HMGB1P36-201ENST00000487709 PTPRRQ15256 657 aa4.4□□□□□ -1.71
HMGB1P36-201ENST00000487709 TBCCQ15814 346 aa4.4□□□□□ -1.71
HMGB1P36-201ENST00000487709 ST3GAL2Q16842 350 aa4.4□□□□□ -1.71
HMGB1P36-201ENST00000487709 EEF1AKMT2Q5JPI9 291 aaKnown RBP4.4□□□□□ -1.71
HMGB1P36-201ENST00000487709 VPS53Q5VIR6 699 aa4.4□□□□□ -1.71
HMGB1P36-201ENST00000487709 RUSC1-AS1Q66K80 236 aa4.4□□□□□ -1.71
HMGB1P36-201ENST00000487709 SUMO4Q6EEV6 95 aa4.4□□□□□ -1.71
HMGB1P36-201ENST00000487709 ZDHHC24Q6UX98 284 aa4.4□□□□□ -1.71
HMGB1P36-201ENST00000487709 RFX8Q6ZV50 586 aa4.4□□□□□ -1.71
HMGB1P36-201ENST00000487709 DTX2Q86UW9 622 aa4.4□□□□□ -1.71
HMGB1P36-201ENST00000487709 ZNF280BQ86YH2 543 aa4.4□□□□□ -1.71
HMGB1P36-201ENST00000487709 IZUMO1Q8IYV9 350 aa4.4□□□□□ -1.71
HMGB1P36-201ENST00000487709 FSTL5Q8N475 847 aaPredicted RBP4.4□□□□□ -1.71
HMGB1P36-201ENST00000487709 ATG4AQ8WYN0 398 aa4.4□□□□□ -1.71
HMGB1P36-201ENST00000487709 LRIG1Q96JA1 1093 aa4.4□□□□□ -1.71
HMGB1P36-201ENST00000487709 HIST1H2AAQ96QV6 131 aa4.4□□□□□ -1.71
HMGB1P36-201ENST00000487709 PAGR1Q9BTK6 254 aa4.4□□□□□ -1.71
HMGB1P36-201ENST00000487709 TTLL2Q9BWV7 592 aa4.4□□□□□ -1.71
HMGB1P36-201ENST00000487709 GBA2Q9HCG7 927 aaPredicted RBP4.4□□□□□ -1.71
HMGB1P36-201ENST00000487709 TRIM36Q9NQ86 728 aa4.4□□□□□ -1.71
HMGB1P36-201ENST00000487709 DNMT3BQ9UBC3 853 aaKnown RBP4.4□□□□□ -1.71
HMGB1P36-201ENST00000487709 RIPOR2Q9Y4F9 1068 aa4.4□□□□□ -1.71
HMGB1P36-201ENST00000487709 M0R3H8 397 aa4.39□□□□□ -1.71
HMGB1P36-201ENST00000487709 PLA2G6O60733 806 aa4.39□□□□□ -1.71
HMGB1P36-201ENST00000487709 NTN1O95631 604 aa4.39□□□□□ -1.71
HMGB1P36-201ENST00000487709 TTLL1O95922 423 aa4.39□□□□□ -1.71
HMGB1P36-201ENST00000487709 VIPP01282 170 aa4.39□□□□□ -1.71
HMGB1P36-201ENST00000487709 NDUFB7P17568 137 aa4.39□□□□□ -1.71
HMGB1P36-201ENST00000487709 EGR1P18146 543 aa4.39□□□□□ -1.71
HMGB1P36-201ENST00000487709 ATICP31939 592 aa4.39□□□□□ -1.71
HMGB1P36-201ENST00000487709 TRAPPC10P48553 1259 aa4.39□□□□□ -1.71
HMGB1P36-201ENST00000487709 PDE1AP54750 535 aa4.39□□□□□ -1.71
HMGB1P36-201ENST00000487709 TRIM14Q14142 442 aa4.39□□□□□ -1.71
HMGB1P36-201ENST00000487709 PUM3Q15397 648 aaKnown RBP4.39□□□□□ -1.71
HMGB1P36-201ENST00000487709 ELF2Q15723 593 aa4.39□□□□□ -1.71
HMGB1P36-201ENST00000487709 NPY5RQ15761 445 aa4.39□□□□□ -1.71
HMGB1P36-201ENST00000487709 MAPKAPK3Q16644 382 aa4.39□□□□□ -1.71
HMGB1P36-201ENST00000487709 CCDC38Q502W7 563 aa4.39□□□□□ -1.71
HMGB1P36-201ENST00000487709 MORN5Q5VZ52 161 aa4.39□□□□□ -1.71
HMGB1P36-201ENST00000487709 SLC9A4Q6AI14 798 aa4.39□□□□□ -1.71
HMGB1P36-201ENST00000487709 FCRL6Q6DN72 434 aa4.39□□□□□ -1.71
HMGB1P36-201ENST00000487709 CRTC1Q6UUV9 634 aa4.39□□□□□ -1.71
HMGB1P36-201ENST00000487709 RINLQ6ZS11 566 aa4.39□□□□□ -1.71
HMGB1P36-201ENST00000487709 ZNF804AQ7Z570 1209 aa4.39□□□□□ -1.71
HMGB1P36-201ENST00000487709 YTHDF3Q7Z739 585 aaKnown RBP4.39□□□□□ -1.71
HMGB1P36-201ENST00000487709 ABRAQ8N0Z2 381 aa4.39□□□□□ -1.71
HMGB1P36-201ENST00000487709 FAM109AQ8N4B1 249 aa4.39□□□□□ -1.71
HMGB1P36-201ENST00000487709 LRRC71Q8N4P6 559 aa4.39□□□□□ -1.71
HMGB1P36-201ENST00000487709 SPATA5Q8NB90 893 aa4.39□□□□□ -1.71
HMGB1P36-201ENST00000487709 DENND1AQ8TEH3 1009 aa4.39□□□□□ -1.71
HMGB1P36-201ENST00000487709 TMEM171Q8WVE6 324 aa4.39□□□□□ -1.71
HMGB1P36-201ENST00000487709 ZDHHC12Q96GR4 267 aa4.39□□□□□ -1.71
HMGB1P36-201ENST00000487709 SLC39A13Q96H72 371 aa4.39□□□□□ -1.71
HMGB1P36-201ENST00000487709 VPS50Q96JG6 964 aa4.39□□□□□ -1.71
HMGB1P36-201ENST00000487709 PBKQ96KB5 322 aa4.39□□□□□ -1.71
HMGB1P36-201ENST00000487709 SCLT1Q96NL6 688 aa4.39□□□□□ -1.71
HMGB1P36-201ENST00000487709 EIF3CQ99613 913 aaKnown RBP4.39□□□□□ -1.71
HMGB1P36-201ENST00000487709 VN1R3Q9BXE9 311 aa4.39□□□□□ -1.71
HMGB1P36-201ENST00000487709 AMBRA1Q9C0C7 1298 aa4.39□□□□□ -1.71
HMGB1P36-201ENST00000487709 PCDHAC1Q9H158 963 aa4.39□□□□□ -1.71
HMGB1P36-201ENST00000487709 HELLSQ9NRZ9 838 aa4.39□□□□□ -1.71
HMGB1P36-201ENST00000487709 RGL1Q9NZL6 768 aa4.39□□□□□ -1.71
HMGB1P36-201ENST00000487709 FNIP2Q9P278 1114 aa4.39□□□□□ -1.71
HMGB1P36-201ENST00000487709 DKK4Q9UBT3 224 aa4.39□□□□□ -1.71
HMGB1P36-201ENST00000487709 STEAP1Q9UHE8 339 aa4.39□□□□□ -1.71
HMGB1P36-201ENST00000487709 BTBD3Q9Y2F9 522 aa4.39□□□□□ -1.71
HMGB1P36-201ENST00000487709 A1L4Q6 167 aa4.38□□□□□ -1.71
HMGB1P36-201ENST00000487709 GCOM1H8Y6P7 765 aaPredicted RBP4.38□□□□□ -1.71
Retrieved 100 of 20,778 RNA–protein pairs in 27.2 ms