RNA–Protein interactions for RNA: ENST00000487633.1

COL4A3-206, Transcript of collagen type IV alpha 3 chain, humanhuman

TSL 3

Gene COL4A3, Length 524 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL4A3-206ENST00000487633 ABL1P00519 1130 aa6.25□□□□□ -1.41
COL4A3-206ENST00000487633 IGLV3-19P01714 112 aa6.25□□□□□ -1.41
COL4A3-206ENST00000487633 IGHV4-34P06331 123 aa6.25□□□□□ -1.41
COL4A3-206ENST00000487633 CENPBP07199 599 aaPredicted RBP6.25□□□□□ -1.41
COL4A3-206ENST00000487633 IRF1P10914 325 aa6.25□□□□□ -1.41
COL4A3-206ENST00000487633 MBL2P11226 248 aaPredicted RBP6.25□□□□□ -1.41
COL4A3-206ENST00000487633 LMO2P25791 158 aa6.25□□□□□ -1.41
COL4A3-206ENST00000487633 GRIA4P48058 902 aa6.25□□□□□ -1.41
COL4A3-206ENST00000487633 EFNA5P52803 228 aa6.25□□□□□ -1.41
COL4A3-206ENST00000487633 PSMC1P62191 440 aaKnown RBP6.25□□□□□ -1.41
COL4A3-206ENST00000487633 FOXK1P85037 733 aa6.25□□□□□ -1.41
COL4A3-206ENST00000487633 GAD2Q05329 585 aa6.25□□□□□ -1.41
COL4A3-206ENST00000487633 MCL1Q07820 350 aa6.25□□□□□ -1.41
COL4A3-206ENST00000487633 RAD51AP2Q09MP3 1159 aa6.25□□□□□ -1.41
COL4A3-206ENST00000487633 SERINC3Q13530 473 aa6.25□□□□□ -1.41
COL4A3-206ENST00000487633 TOB2Q14106 344 aaPredicted RBP6.25□□□□□ -1.41
COL4A3-206ENST00000487633 CALCRLQ16602 461 aa6.25□□□□□ -1.41
COL4A3-206ENST00000487633 GEN1Q17RS7 908 aa6.25□□□□□ -1.41
COL4A3-206ENST00000487633 PROX2Q3B8N5 592 aa6.25□□□□□ -1.41
COL4A3-206ENST00000487633 ZSCAN23Q3MJ62 389 aa6.25□□□□□ -1.41
COL4A3-206ENST00000487633 INTS6LQ5JSJ4 861 aaKnown RBP6.25□□□□□ -1.41
COL4A3-206ENST00000487633 CDCP2Q5VXM1 449 aa6.25□□□□□ -1.41
COL4A3-206ENST00000487633 TMEM215Q68D42 235 aa6.25□□□□□ -1.41
COL4A3-206ENST00000487633 SLC39A4Q6P5W5 647 aa6.25□□□□□ -1.41
COL4A3-206ENST00000487633 TPGS1Q6ZTW0 290 aa6.25□□□□□ -1.41
COL4A3-206ENST00000487633 METTL3Q86U44 580 aaKnown RBP6.25□□□□□ -1.41
COL4A3-206ENST00000487633 SLFN12Q8IYM2 578 aa6.25□□□□□ -1.41
COL4A3-206ENST00000487633 PDCL2Q8N4E4 241 aa6.25□□□□□ -1.41
COL4A3-206ENST00000487633 RBBP8NLQ8NC74 664 aaPredicted RBP6.25□□□□□ -1.41
COL4A3-206ENST00000487633 C2orf15Q8WU43 125 aaKnown RBP6.25□□□□□ -1.41
COL4A3-206ENST00000487633 HTR3CQ8WXA8 447 aa6.25□□□□□ -1.41
COL4A3-206ENST00000487633 AGXT2Q9BYV1 514 aa6.25□□□□□ -1.41
COL4A3-206ENST00000487633 C22orf23Q9BZE7 217 aa6.25□□□□□ -1.41
COL4A3-206ENST00000487633 CRTAC1Q9NQ79 661 aa6.25□□□□□ -1.41
COL4A3-206ENST00000487633 SPHK2Q9NRA0 654 aa6.25□□□□□ -1.41
COL4A3-206ENST00000487633 L1RE1Q9UN81 338 aa6.25□□□□□ -1.41
COL4A3-206ENST00000487633 SATB2Q9UPW6 733 aa6.25□□□□□ -1.41
COL4A3-206ENST00000487633 PLAAQ9Y263 795 aa6.25□□□□□ -1.41
COL4A3-206ENST00000487633 ADGRG4Q8IZF6 3080 aa6.25□□□□□ -1.41
COL4A3-206ENST00000487633 CELSR1Q9NYQ6 3014 aa6.25□□□□□ -1.41
COL4A3-206ENST00000487633 LY6G6EA0A0G2JKS1 128 aa6.24□□□□□ -1.41
COL4A3-206ENST00000487633 CCDC196A0A1B0GTZ2 297 aa6.24□□□□□ -1.41
COL4A3-206ENST00000487633 NEDD8-MDP1E9PL57 170 aa6.24□□□□□ -1.41
COL4A3-206ENST00000487633 COCHO43405 550 aa6.24□□□□□ -1.41
COL4A3-206ENST00000487633 NOBOXO60393 691 aa6.24□□□□□ -1.41
COL4A3-206ENST00000487633 TSPAN3O60637 253 aa6.24□□□□□ -1.41
COL4A3-206ENST00000487633 TOM1L1O75674 476 aa6.24□□□□□ -1.41
COL4A3-206ENST00000487633 DXOO77932 396 aaKnown RBP6.24□□□□□ -1.41
COL4A3-206ENST00000487633 FSBPO95073 299 aa6.24□□□□□ -1.41
COL4A3-206ENST00000487633 ADH1CP00326 375 aa6.24□□□□□ -1.41
COL4A3-206ENST00000487633 ITGAVP06756 1048 aa6.24□□□□□ -1.41
COL4A3-206ENST00000487633 GIMD1P0DJR0 217 aa6.24□□□□□ -1.41
COL4A3-206ENST00000487633 GCFC2P16383 781 aaKnown RBP6.24□□□□□ -1.41
COL4A3-206ENST00000487633 EPHA8P29322 1005 aaPredicted RBP6.24□□□□□ -1.41
COL4A3-206ENST00000487633 UCNP55089 124 aa6.24□□□□□ -1.41
COL4A3-206ENST00000487633 PPP2R3AQ06190 1150 aa6.24□□□□□ -1.41
COL4A3-206ENST00000487633 SSRP1Q08945 709 aaKnown RBP6.24□□□□□ -1.41
COL4A3-206ENST00000487633 IFRD2Q12894 506 aaPredicted RBP6.24□□□□□ -1.41
COL4A3-206ENST00000487633 TAF10Q12962 218 aa6.24□□□□□ -1.41
COL4A3-206ENST00000487633 STK3Q13188 491 aa6.24□□□□□ -1.41
COL4A3-206ENST00000487633 MAPK8IP2Q13387 824 aaPredicted RBP6.24□□□□□ -1.41
COL4A3-206ENST00000487633 ENPP2Q13822 863 aa6.24□□□□□ -1.41
COL4A3-206ENST00000487633 PPP2R5AQ15172 486 aa6.24□□□□□ -1.41
COL4A3-206ENST00000487633 TSGA10IPQ3SY00 556 aa6.24□□□□□ -1.41
COL4A3-206ENST00000487633 C3orf38Q5JPI3 329 aa6.24□□□□□ -1.41
COL4A3-206ENST00000487633 SFMBT2Q5VUG0 894 aa6.24□□□□□ -1.41
COL4A3-206ENST00000487633 GRAMD4Q6IC98 578 aa6.24□□□□□ -1.41
COL4A3-206ENST00000487633 CCDC81Q6ZN84 652 aa6.24□□□□□ -1.41
COL4A3-206ENST00000487633 SPATS2Q86XZ4 545 aaKnown RBP6.24□□□□□ -1.41
COL4A3-206ENST00000487633 FAM26EQ8N5C1 309 aa6.24□□□□□ -1.41
COL4A3-206ENST00000487633 TMEM161BQ8NDZ6 487 aa6.24□□□□□ -1.41
COL4A3-206ENST00000487633 CXorf38Q8TB03 319 aa6.24□□□□□ -1.41
COL4A3-206ENST00000487633 KCNV2Q8TDN2 545 aa6.24□□□□□ -1.41
COL4A3-206ENST00000487633 LEO1Q8WVC0 666 aaPredicted RBP6.24□□□□□ -1.41
COL4A3-206ENST00000487633 SIPA1Q96FS4 1042 aa6.24□□□□□ -1.41
COL4A3-206ENST00000487633 LIN37Q96GY3 246 aaPredicted RBP6.24□□□□□ -1.41
COL4A3-206ENST00000487633 IFT74Q96LB3 600 aa6.24□□□□□ -1.41
COL4A3-206ENST00000487633 ELF4Q99607 663 aaPredicted RBP6.24□□□□□ -1.41
COL4A3-206ENST00000487633 OSBPL2Q9H1P3 480 aa6.24□□□□□ -1.41
COL4A3-206ENST00000487633 MTG2Q9H4K7 406 aa6.24□□□□□ -1.41
COL4A3-206ENST00000487633 CCSER2Q9H7U1 834 aa6.24□□□□□ -1.41
COL4A3-206ENST00000487633 TUFT1Q9NNX1 390 aa6.24□□□□□ -1.41
COL4A3-206ENST00000487633 KMT5AQ9NQR1 393 aa6.24□□□□□ -1.41
COL4A3-206ENST00000487633 DDX43Q9NXZ2 648 aaKnown RBP6.24□□□□□ -1.41
COL4A3-206ENST00000487633 UXTQ9UBK9 157 aaPredicted RBP6.24□□□□□ -1.41
COL4A3-206ENST00000487633 SERGEFQ9UGK8 458 aa6.24□□□□□ -1.41
COL4A3-206ENST00000487633 U3KQA8 63 aa6.24□□□□□ -1.41
COL4A3-206ENST00000487633 NPHP3-ACAD11A0A0J9YXS1 232 aa6.23□□□□□ -1.41
COL4A3-206ENST00000487633 A0A1W2PR77 199 aa6.23□□□□□ -1.41
COL4A3-206ENST00000487633 A1L4Q6 167 aa6.23□□□□□ -1.41
COL4A3-206ENST00000487633 KPNA7A9QM74 516 aa6.23□□□□□ -1.41
COL4A3-206ENST00000487633 PALM2-AKAP2B1ALY0 433 aaPredicted RBP6.23□□□□□ -1.41
COL4A3-206ENST00000487633 SIGLEC6O43699 453 aa6.23□□□□□ -1.41
COL4A3-206ENST00000487633 CACNG3O60359 315 aa6.23□□□□□ -1.41
COL4A3-206ENST00000487633 CSO75390 466 aaKnown RBP6.23□□□□□ -1.41
COL4A3-206ENST00000487633 DEXIO95424 95 aa6.23□□□□□ -1.41
COL4A3-206ENST00000487633 BAG4O95429 457 aaKnown RBP6.23□□□□□ -1.41
COL4A3-206ENST00000487633 CLTAP09496 248 aa6.23□□□□□ -1.41
COL4A3-206ENST00000487633 C1SP09871 688 aa6.23□□□□□ -1.41
COL4A3-206ENST00000487633 MAPTP10636 758 aaKnown RBP6.23□□□□□ -1.41
Retrieved 100 of 20,778 RNA–protein pairs in 22.6 ms