RNA–Protein interactions for RNA: ENST00000487563.1

PLOD3-215, Transcript of procollagen-lysine,2-oxoglutarate 5-dioxygenase 3, humanhuman

TSL 2

Gene PLOD3, Length 712 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PLOD3-215ENST00000487563 RHOBTB1O94844 696 aa24.86■■□□□ 1.57
PLOD3-215ENST00000487563 KLF8O95600 359 aaPredicted RBP24.86■■□□□ 1.57
PLOD3-215ENST00000487563 RARGP13631 454 aa24.86■■□□□ 1.57
PLOD3-215ENST00000487563 MESP2Q0VG99 397 aa24.86■■□□□ 1.57
PLOD3-215ENST00000487563 STIM1Q13586 685 aa24.86■■□□□ 1.57
PLOD3-215ENST00000487563 PLK5Q496M5 336 aa24.86■■□□□ 1.57
PLOD3-215ENST00000487563 HSF5Q4G112 596 aaPredicted RBP24.86■■□□□ 1.57
PLOD3-215ENST00000487563 USP39Q53GS9 565 aaKnown RBP24.86■■□□□ 1.57
PLOD3-215ENST00000487563 COBLL1Q53SF7 1204 aa24.86■■□□□ 1.57
PLOD3-215ENST00000487563 C10orf120Q5SQS8 335 aa24.86■■□□□ 1.57
PLOD3-215ENST00000487563 NUDT18Q6ZVK8 323 aa24.86■■□□□ 1.57
PLOD3-215ENST00000487563 TADA2BQ86TJ2 420 aa24.86■■□□□ 1.57
PLOD3-215ENST00000487563 SFTPA1Q8IWL2 248 aa24.86■■□□□ 1.57
PLOD3-215ENST00000487563 TXNDC5Q8NBS9 432 aaKnown RBP24.86■■□□□ 1.57
PLOD3-215ENST00000487563 ENGASEQ8NFI3 743 aa24.86■■□□□ 1.57
PLOD3-215ENST00000487563 ZC3H10Q96K80 434 aaKnown RBP24.86■■□□□ 1.57
PLOD3-215ENST00000487563 DUSP9Q99956 384 aaKnown RBP24.86■■□□□ 1.57
PLOD3-215ENST00000487563 KLF16Q9BXK1 252 aaPredicted RBP24.86■■□□□ 1.57
PLOD3-215ENST00000487563 NMUR1Q9HB89 426 aa24.86■■□□□ 1.57
PLOD3-215ENST00000487563 OSER1Q9NX31 292 aa24.86■■□□□ 1.57
PLOD3-215ENST00000487563 DEC1Q9P2X7 70 aa24.86■■□□□ 1.57
PLOD3-215ENST00000487563 PCDHGA5Q9Y5G8 931 aa24.86■■□□□ 1.57
PLOD3-215ENST00000487563 MYOFQ9NZM1 2061 aa24.85■■□□□ 1.57
PLOD3-215ENST00000487563 DCDC2BA2VCK2 349 aa24.85■■□□□ 1.57
PLOD3-215ENST00000487563 TBC1D3BA6NDS4 549 aa24.85■■□□□ 1.57
PLOD3-215ENST00000487563 ANTXRLA6NF34 631 aa24.85■■□□□ 1.57
PLOD3-215ENST00000487563 DCLK1O15075 740 aa24.85■■□□□ 1.57
PLOD3-215ENST00000487563 TNFRSF4P43489 277 aa24.85■■□□□ 1.57
PLOD3-215ENST00000487563 PSEN1P49768 467 aa24.85■■□□□ 1.57
PLOD3-215ENST00000487563 KIF11P52732 1056 aa24.85■■□□□ 1.57
PLOD3-215ENST00000487563 MCCD1P59942 119 aaPredicted RBP24.85■■□□□ 1.57
PLOD3-215ENST00000487563 LRRC63Q05C16 580 aa24.85■■□□□ 1.57
PLOD3-215ENST00000487563 CRY1Q16526 586 aa24.85■■□□□ 1.57
PLOD3-215ENST00000487563 EOGTQ5NDL2 527 aa24.85■■□□□ 1.57
PLOD3-215ENST00000487563 ANKRD40Q6AI12 368 aa24.85■■□□□ 1.57
PLOD3-215ENST00000487563 TMEM25Q86YD3 366 aa24.85■■□□□ 1.57
PLOD3-215ENST00000487563 TMEM176AQ96HP8 235 aa24.85■■□□□ 1.57
PLOD3-215ENST00000487563 CNOT6LQ96LI5 555 aaKnown RBP24.85■■□□□ 1.57
PLOD3-215ENST00000487563 TIGD1Q96MW7 591 aa24.85■■□□□ 1.57
PLOD3-215ENST00000487563 ARID3AQ99856 593 aa24.85■■□□□ 1.57
PLOD3-215ENST00000487563 MTPAPQ9NVV4 582 aaKnown RBP eCLIP24.85■■□□□ 1.57
PLOD3-215ENST00000487563 DNMT3LQ9UJW3 386 aa24.85■■□□□ 1.57
PLOD3-215ENST00000487563 SDK1Q7Z5N4 2213 aa24.84■■□□□ 1.57
PLOD3-215ENST00000487563 PSMA7O14818 248 aa24.84■■□□□ 1.57
PLOD3-215ENST00000487563 SLC30A4O14863 429 aa24.84■■□□□ 1.57
PLOD3-215ENST00000487563 MDM4O15151 490 aa24.84■■□□□ 1.57
PLOD3-215ENST00000487563 TULP3O75386 442 aa24.84■■□□□ 1.57
PLOD3-215ENST00000487563 RALAP11233 206 aa24.84■■□□□ 1.57
PLOD3-215ENST00000487563 MPLP40238 635 aa24.84■■□□□ 1.57
PLOD3-215ENST00000487563 SLC8A3P57103 927 aa24.84■■□□□ 1.57
PLOD3-215ENST00000487563 SF3A2Q15428 464 aaKnown RBP24.84■■□□□ 1.57
PLOD3-215ENST00000487563 CBWD6Q4V339 395 aa24.84■■□□□ 1.57
PLOD3-215ENST00000487563 CBWD3Q5JTY5 395 aa24.84■■□□□ 1.57
PLOD3-215ENST00000487563 CBWD5Q5RIA9 395 aa24.84■■□□□ 1.57
PLOD3-215ENST00000487563 HTR3DQ70Z44 454 aa24.84■■□□□ 1.57
PLOD3-215ENST00000487563 CCDC186Q7Z3E2 898 aa24.84■■□□□ 1.57
PLOD3-215ENST00000487563 C11orf74Q86VG3 221 aa24.84■■□□□ 1.57
PLOD3-215ENST00000487563 ETFBKMTQ8IXQ9 262 aa24.84■■□□□ 1.57
PLOD3-215ENST00000487563 IL17RCQ8NAC3 791 aa24.84■■□□□ 1.57
PLOD3-215ENST00000487563 TATDN2Q93075 761 aa24.84■■□□□ 1.57
PLOD3-215ENST00000487563 DUSP15Q9H1R2 295 aaPredicted RBP24.84■■□□□ 1.57
PLOD3-215ENST00000487563 POLMQ9NP87 494 aaPredicted RBP24.84■■□□□ 1.57
PLOD3-215ENST00000487563 ARMCX3Q9UH62 379 aaPredicted RBP24.84■■□□□ 1.57
PLOD3-215ENST00000487563 NUDT5Q9UKK9 219 aa24.84■■□□□ 1.57
PLOD3-215ENST00000487563 INVSQ9Y283 1065 aa24.84■■□□□ 1.57
PLOD3-215ENST00000487563 TRIM49BA6NDI0 452 aa24.83■■□□□ 1.57
PLOD3-215ENST00000487563 GDF9O60383 454 aa24.83■■□□□ 1.57
PLOD3-215ENST00000487563 ZNF806P0C7X5 589 aa24.83■■□□□ 1.57
PLOD3-215ENST00000487563 PMS1P54277 932 aaKnown RBP24.83■■□□□ 1.57
PLOD3-215ENST00000487563 RAD23BP54727 409 aa24.83■■□□□ 1.57
PLOD3-215ENST00000487563 EMC10Q5UCC4 262 aa24.83■■□□□ 1.57
PLOD3-215ENST00000487563 KLHDC10Q6PID8 442 aa24.83■■□□□ 1.57
PLOD3-215ENST00000487563 RASSF3Q86WH2 238 aa24.83■■□□□ 1.57
PLOD3-215ENST00000487563 SLC4A11Q8NBS3 891 aa24.83■■□□□ 1.57
PLOD3-215ENST00000487563 MDGA1Q8NFP4 955 aa24.83■■□□□ 1.57
PLOD3-215ENST00000487563 BBS2Q9BXC9 721 aa24.83■■□□□ 1.57
PLOD3-215ENST00000487563 FAM124BQ9H5Z6 455 aaPredicted RBP24.83■■□□□ 1.57
PLOD3-215ENST00000487563 BCCIPQ9P287 314 aaKnown RBP eCLIP24.83■■□□□ 1.57
PLOD3-215ENST00000487563 CIZ1Q9ULV3 898 aaPredicted RBP24.83■■□□□ 1.57
PLOD3-215ENST00000487563 DNAH14Q0VDD8 3507 aa24.82■■□□□ 1.56
PLOD3-215ENST00000487563 NEDD8-MDP1E9PL57 170 aa24.82■■□□□ 1.56
PLOD3-215ENST00000487563 SGK1O00141 431 aa24.82■■□□□ 1.56
PLOD3-215ENST00000487563 KIR2DL1P43626 348 aaPredicted RBP24.82■■□□□ 1.56
PLOD3-215ENST00000487563 PLA2G4AP47712 749 aa24.82■■□□□ 1.56
PLOD3-215ENST00000487563 YWHAEP62258 255 aaKnown RBP24.82■■□□□ 1.56
PLOD3-215ENST00000487563 C10orf76Q5T2E6 689 aa24.82■■□□□ 1.56
PLOD3-215ENST00000487563 GRAMD4Q6IC98 578 aa24.82■■□□□ 1.56
PLOD3-215ENST00000487563 TMEM92Q6UXU6 159 aa24.82■■□□□ 1.56
PLOD3-215ENST00000487563 TRMT11Q7Z4G4 463 aaKnown RBP24.82■■□□□ 1.56
PLOD3-215ENST00000487563 MIB1Q86YT6 1006 aa24.82■■□□□ 1.56
PLOD3-215ENST00000487563 ZC3H3Q8IXZ2 948 aaKnown RBP24.82■■□□□ 1.56
PLOD3-215ENST00000487563 PHTF2Q8N3S3 785 aa24.82■■□□□ 1.56
PLOD3-215ENST00000487563 TERB1Q8NA31 727 aa24.82■■□□□ 1.56
PLOD3-215ENST00000487563 SPATA20Q8TB22 786 aa24.82■■□□□ 1.56
PLOD3-215ENST00000487563 XPO6Q96QU8 1125 aaKnown RBP24.82■■□□□ 1.56
PLOD3-215ENST00000487563 CDK5RAP1Q96SZ6 601 aaKnown RBP24.82■■□□□ 1.56
PLOD3-215ENST00000487563 ZDHHC4Q9NPG8 344 aa24.82■■□□□ 1.56
PLOD3-215ENST00000487563 DNAJC17Q9NVM6 304 aaKnown RBP24.82■■□□□ 1.56
PLOD3-215ENST00000487563 A0A0A0MRY4 1105 aa24.81■■□□□ 1.56
PLOD3-215ENST00000487563 CREB5Q02930 508 aa24.81■■□□□ 1.56
Retrieved 100 of 20,778 RNA–protein pairs in 42.5 ms