RNA–Protein interactions for RNA: ENST00000487461.1

VPS16-208, Transcript of VPS16, CORVET/HOPS core subunit, humanhuman

TSL 5

Gene VPS16, Length 634 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS16-208ENST00000487461 CACNA1BQ00975 2339 aa12.88□□□□□ -0.35
VPS16-208ENST00000487461 CILPO75339 1184 aa12.88□□□□□ -0.35
VPS16-208ENST00000487461 ALDH1A2O94788 518 aa12.88□□□□□ -0.35
VPS16-208ENST00000487461 KIF20AO95235 890 aa12.88□□□□□ -0.35
VPS16-208ENST00000487461 PSMC2P35998 433 aaKnown RBP12.88□□□□□ -0.35
VPS16-208ENST00000487461 ATP5C1P36542 298 aaKnown RBP12.88□□□□□ -0.35
VPS16-208ENST00000487461 MCCD1P59942 119 aaPredicted RBP12.88□□□□□ -0.35
VPS16-208ENST00000487461 ANO4Q32M45 955 aa12.88□□□□□ -0.35
VPS16-208ENST00000487461 N4BP2L1Q5TBK1 243 aaPredicted RBP12.88□□□□□ -0.35
VPS16-208ENST00000487461 BTBD8Q5XKL5 378 aa12.88□□□□□ -0.35
VPS16-208ENST00000487461 RNF43Q68DV7 783 aa12.88□□□□□ -0.35
VPS16-208ENST00000487461 INTS8Q75QN2 995 aaKnown RBP12.88□□□□□ -0.35
VPS16-208ENST00000487461 FAM186BQ8IYM0 893 aa12.88□□□□□ -0.35
VPS16-208ENST00000487461 GUF1Q8N442 669 aaKnown RBP12.88□□□□□ -0.35
VPS16-208ENST00000487461 RLN3Q8WXF3 142 aa12.88□□□□□ -0.35
VPS16-208ENST00000487461 CCDC47Q96A33 483 aaKnown RBP12.88□□□□□ -0.35
VPS16-208ENST00000487461 NT5C1AQ9BXI3 368 aa12.88□□□□□ -0.35
VPS16-208ENST00000487461 MMRN2Q9H8L6 949 aa12.88□□□□□ -0.35
VPS16-208ENST00000487461 NMUR1Q9HB89 426 aa12.88□□□□□ -0.35
VPS16-208ENST00000487461 CYLDQ9NQC7 956 aa12.88□□□□□ -0.35
VPS16-208ENST00000487461 DEC1Q9P2X7 70 aa12.88□□□□□ -0.35
VPS16-208ENST00000487461 NUDT5Q9UKK9 219 aa12.88□□□□□ -0.35
VPS16-208ENST00000487461 MYO18AQ92614 2054 aaKnown RBP12.87□□□□□ -0.35
VPS16-208ENST00000487461 GON4LQ3T8J9 2241 aa12.87□□□□□ -0.35
VPS16-208ENST00000487461 A0A1W2PQ27 194 aa12.87□□□□□ -0.35
VPS16-208ENST00000487461 A0A1W2PQ64 194 aa12.87□□□□□ -0.35
VPS16-208ENST00000487461 A0A1W2PQD8 194 aa12.87□□□□□ -0.35
VPS16-208ENST00000487461 A0A1W2PQH9 124 aa12.87□□□□□ -0.35
VPS16-208ENST00000487461 C4orf47A7E2U8 309 aa12.87□□□□□ -0.35
VPS16-208ENST00000487461 MDM4O15151 490 aa12.87□□□□□ -0.35
VPS16-208ENST00000487461 CYP26A1O43174 497 aa12.87□□□□□ -0.35
VPS16-208ENST00000487461 ZNF202O95125 648 aa12.87□□□□□ -0.35
VPS16-208ENST00000487461 KRT13P13646 458 aa12.87□□□□□ -0.35
VPS16-208ENST00000487461 CD58P19256 250 aa12.87□□□□□ -0.35
VPS16-208ENST00000487461 ACO1P21399 889 aaKnown RBP12.87□□□□□ -0.35
VPS16-208ENST00000487461 RPL13P26373 211 aaKnown RBP12.87□□□□□ -0.35
VPS16-208ENST00000487461 P2RY2P41231 377 aa12.87□□□□□ -0.35
VPS16-208ENST00000487461 ENPEPQ07075 957 aa12.87□□□□□ -0.35
VPS16-208ENST00000487461 ZCWPW2Q504Y3 356 aa12.87□□□□□ -0.35
VPS16-208ENST00000487461 SCD5Q86SK9 330 aa12.87□□□□□ -0.35
VPS16-208ENST00000487461 MIB1Q86YT6 1006 aa12.87□□□□□ -0.35
VPS16-208ENST00000487461 KCNV2Q8TDN2 545 aa12.87□□□□□ -0.35
VPS16-208ENST00000487461 HMGB4Q8WW32 186 aa12.87□□□□□ -0.35
VPS16-208ENST00000487461 SEMA4DQ92854 862 aa12.87□□□□□ -0.35
VPS16-208ENST00000487461 EEF2KMTQ96G04 330 aa12.87□□□□□ -0.35
VPS16-208ENST00000487461 NIF3L1Q9GZT8 377 aa12.87□□□□□ -0.35
VPS16-208ENST00000487461 POLMQ9NP87 494 aaPredicted RBP12.87□□□□□ -0.35
VPS16-208ENST00000487461 MBD1Q9UIS9 605 aaPredicted RBP12.87□□□□□ -0.35
VPS16-208ENST00000487461 TCRBV21S2A2A0A5A6 115 aa12.86□□□□□ -0.35
VPS16-208ENST00000487461 LNP1A1A4G5 178 aa12.86□□□□□ -0.35
VPS16-208ENST00000487461 PATE3B3GLJ2 98 aa12.86□□□□□ -0.35
VPS16-208ENST00000487461 KHNYNO15037 678 aaKnown RBP12.86□□□□□ -0.35
VPS16-208ENST00000487461 MAP3K13O43283 966 aa12.86□□□□□ -0.35
VPS16-208ENST00000487461 KCNK5O95279 499 aa12.86□□□□□ -0.35
VPS16-208ENST00000487461 RARGP13631 454 aa12.86□□□□□ -0.35
VPS16-208ENST00000487461 WASP42768 502 aa12.86□□□□□ -0.35
VPS16-208ENST00000487461 PLA2G4AP47712 749 aa12.86□□□□□ -0.35
VPS16-208ENST00000487461 DHPSP49366 369 aaPredicted RBP12.86□□□□□ -0.35
VPS16-208ENST00000487461 KIF11P52732 1056 aa12.86□□□□□ -0.35
VPS16-208ENST00000487461 IRX4P78413 519 aa12.86□□□□□ -0.35
VPS16-208ENST00000487461 MAP7D1Q3KQU3 841 aa12.86□□□□□ -0.35
VPS16-208ENST00000487461 C10orf76Q5T2E6 689 aa12.86□□□□□ -0.35
VPS16-208ENST00000487461 PPP1R26Q5T8A7 1209 aaPredicted RBP12.86□□□□□ -0.35
VPS16-208ENST00000487461 KLHDC10Q6PID8 442 aa12.86□□□□□ -0.35
VPS16-208ENST00000487461 TPGS1Q6ZTW0 290 aa12.86□□□□□ -0.35
VPS16-208ENST00000487461 CYP2U1Q7Z449 544 aa12.86□□□□□ -0.35
VPS16-208ENST00000487461 SMYD4Q8IYR2 804 aaPredicted RBP12.86□□□□□ -0.35
VPS16-208ENST00000487461 ZNF513Q8N8E2 541 aaPredicted RBP12.86□□□□□ -0.35
VPS16-208ENST00000487461 PIGKQ92643 395 aa12.86□□□□□ -0.35
VPS16-208ENST00000487461 HEXIM2Q96MH2 286 aaKnown RBP12.86□□□□□ -0.35
VPS16-208ENST00000487461 EDEM2Q9BV94 578 aa12.86□□□□□ -0.35
VPS16-208ENST00000487461 DUSP16Q9BY84 665 aa12.86□□□□□ -0.35
VPS16-208ENST00000487461 IMPG2Q9BZV3 1241 aa12.86□□□□□ -0.35
VPS16-208ENST00000487461 SCAND2PQ9GZW5 306 aaPredicted RBP12.86□□□□□ -0.35
VPS16-208ENST00000487461 GDPD2Q9HCC8 539 aa12.86□□□□□ -0.35
VPS16-208ENST00000487461 TMEM8AQ9HCN3 771 aa12.86□□□□□ -0.35
VPS16-208ENST00000487461 PNPLA8Q9NP80 782 aa12.86□□□□□ -0.35
VPS16-208ENST00000487461 MTPAPQ9NVV4 582 aaKnown RBP eCLIP12.86□□□□□ -0.35
VPS16-208ENST00000487461 BCCIPQ9P287 314 aaKnown RBP eCLIP12.86□□□□□ -0.35
VPS16-208ENST00000487461 CIZ1Q9ULV3 898 aaPredicted RBP12.86□□□□□ -0.35
VPS16-208ENST00000487461 STARD13Q9Y3M8 1113 aa12.86□□□□□ -0.35
VPS16-208ENST00000487461 PCDHA5Q9Y5H7 936 aa12.86□□□□□ -0.35
VPS16-208ENST00000487461 EPG5Q9HCE0 2579 aa12.86□□□□□ -0.35
VPS16-208ENST00000487461 THADAQ6YHU6 1953 aa12.85□□□□□ -0.35
VPS16-208ENST00000487461 MSANTD3-TMEFF1A0A0A6YYJ0 341 aa12.85□□□□□ -0.35
VPS16-208ENST00000487461 NEDD8-MDP1E9PL57 170 aa12.85□□□□□ -0.35
VPS16-208ENST00000487461 CDX4O14627 284 aaPredicted RBP12.85□□□□□ -0.35
VPS16-208ENST00000487461 CISD3P0C7P0 127 aa12.85□□□□□ -0.35
VPS16-208ENST00000487461 TYRP14679 529 aa12.85□□□□□ -0.35
VPS16-208ENST00000487461 TRIM21P19474 475 aaKnown RBP12.85□□□□□ -0.35
VPS16-208ENST00000487461 PMLP29590 882 aa12.85□□□□□ -0.35
VPS16-208ENST00000487461 GTF2H1P32780 548 aa12.85□□□□□ -0.35
VPS16-208ENST00000487461 PREPLQ4J6C6 727 aaPredicted RBP12.85□□□□□ -0.35
VPS16-208ENST00000487461 ZNF394Q53GI3 561 aa12.85□□□□□ -0.35
VPS16-208ENST00000487461 C10orf120Q5SQS8 335 aa12.85□□□□□ -0.35
VPS16-208ENST00000487461 KRT39Q6A163 491 aa12.85□□□□□ -0.35
VPS16-208ENST00000487461 GRAMD4Q6IC98 578 aa12.85□□□□□ -0.35
VPS16-208ENST00000487461 Q6ZNB5 142 aa12.85□□□□□ -0.35
VPS16-208ENST00000487461 TOGARAM2Q6ZUX3 1019 aa12.85□□□□□ -0.35
VPS16-208ENST00000487461 LPCAT2Q7L5N7 544 aa12.85□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 824.6 ms