RNA–Protein interactions for RNA: ENST00000487386.1

LINC00888-204, long intergenic non-protein coding RNA 888, humanhuman

BASIC

Gene LINC00888, Length 421 nt, Biotype transcribed unprocessed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00888-204ENST00000487386 MT-CO3P00414 261 aa4.93□□□□□ -1.62
LINC00888-204ENST00000487386 MYL3P08590 195 aa4.93□□□□□ -1.62
LINC00888-204ENST00000487386 CHRM5P08912 532 aaPredicted RBP4.93□□□□□ -1.62
LINC00888-204ENST00000487386 ARP10275 920 aa4.93□□□□□ -1.62
LINC00888-204ENST00000487386 DEUP1Q05D60 604 aa4.93□□□□□ -1.62
LINC00888-204ENST00000487386 SRSF4Q08170 494 aaKnown RBP4.93□□□□□ -1.62
LINC00888-204ENST00000487386 GRM1Q13255 1194 aa4.93□□□□□ -1.62
LINC00888-204ENST00000487386 ACOX1Q15067 660 aa4.93□□□□□ -1.62
LINC00888-204ENST00000487386 ST3GAL2Q16842 350 aa4.93□□□□□ -1.62
LINC00888-204ENST00000487386 FAM209BQ5JX69 171 aa4.93□□□□□ -1.62
LINC00888-204ENST00000487386 TMEM63BQ5T3F8 832 aa4.93□□□□□ -1.62
LINC00888-204ENST00000487386 CRTC1Q6UUV9 634 aa4.93□□□□□ -1.62
LINC00888-204ENST00000487386 CLEC9AQ6UXN8 241 aa4.93□□□□□ -1.62
LINC00888-204ENST00000487386 C8orf58Q8NAV2 365 aa4.93□□□□□ -1.62
LINC00888-204ENST00000487386 SUN3Q8TAQ9 357 aa4.93□□□□□ -1.62
LINC00888-204ENST00000487386 ADAMTS18Q8TE60 1221 aa4.93□□□□□ -1.62
LINC00888-204ENST00000487386 DDB2Q92466 427 aa4.93□□□□□ -1.62
LINC00888-204ENST00000487386 LRRC46Q96FV0 321 aa4.93□□□□□ -1.62
LINC00888-204ENST00000487386 RIPOR3Q96MK2 946 aa4.93□□□□□ -1.62
LINC00888-204ENST00000487386 ASB2Q96Q27 587 aa4.93□□□□□ -1.62
LINC00888-204ENST00000487386 WDR24Q96S15 920 aa4.93□□□□□ -1.62
LINC00888-204ENST00000487386 MAGEB5Q9BZ81 275 aa4.93□□□□□ -1.62
LINC00888-204ENST00000487386 SEMA4CQ9C0C4 833 aa4.93□□□□□ -1.62
LINC00888-204ENST00000487386 SNX15Q9NRS6 342 aa4.93□□□□□ -1.62
LINC00888-204ENST00000487386 TFCP2L1Q9NZI6 479 aa4.93□□□□□ -1.62
LINC00888-204ENST00000487386 ASAP1Q9ULH1 1129 aa4.93□□□□□ -1.62
LINC00888-204ENST00000487386 PHTF1Q9UMS5 762 aa4.93□□□□□ -1.62
LINC00888-204ENST00000487386 OR2W5A6NFC9 320 aa4.92□□□□□ -1.62
LINC00888-204ENST00000487386 TNFSF4P23510 183 aa4.92□□□□□ -1.62
LINC00888-204ENST00000487386 SLC5A2P31639 672 aa4.92□□□□□ -1.62
LINC00888-204ENST00000487386 AK2P54819 239 aa4.92□□□□□ -1.62
LINC00888-204ENST00000487386 EIF4A1P60842 406 aaKnown RBP4.92□□□□□ -1.62
LINC00888-204ENST00000487386 SSBP2P81877 361 aaPredicted RBP4.92□□□□□ -1.62
LINC00888-204ENST00000487386 FAM187BQ17R55 369 aa4.92□□□□□ -1.62
LINC00888-204ENST00000487386 LONRF1Q17RB8 773 aa4.92□□□□□ -1.62
LINC00888-204ENST00000487386 ARL13BQ3SXY8 428 aa4.92□□□□□ -1.62
LINC00888-204ENST00000487386 DENND2CQ68D51 928 aa4.92□□□□□ -1.62
LINC00888-204ENST00000487386 IL31Q6EBC2 164 aa4.92□□□□□ -1.62
LINC00888-204ENST00000487386 ABLIM2Q6H8Q1 611 aa4.92□□□□□ -1.62
LINC00888-204ENST00000487386 KRT73Q86Y46 540 aa4.92□□□□□ -1.62
LINC00888-204ENST00000487386 PNPLA1Q8N8W4 532 aa4.92□□□□□ -1.62
LINC00888-204ENST00000487386 PNLDC1Q8NA58 520 aaKnown RBP4.92□□□□□ -1.62
LINC00888-204ENST00000487386 ZNF398Q8TD17 642 aa4.92□□□□□ -1.62
LINC00888-204ENST00000487386 PARD3BQ8TEW8 1205 aa4.92□□□□□ -1.62
LINC00888-204ENST00000487386 EDC3Q96F86 508 aaKnown RBP4.92□□□□□ -1.62
LINC00888-204ENST00000487386 SNX27Q96L92 541 aa4.92□□□□□ -1.62
LINC00888-204ENST00000487386 TMEM8AQ9HCN3 771 aa4.92□□□□□ -1.62
LINC00888-204ENST00000487386 MAN2B2Q9Y2E5 1009 aa4.92□□□□□ -1.62
LINC00888-204ENST00000487386 CCDC180Q9P1Z9 1646 aa4.92□□□□□ -1.62
LINC00888-204ENST00000487386 TUBB4AP04350 444 aa4.91□□□□□ -1.62
LINC00888-204ENST00000487386 NBPF7P0C2Y1 421 aaPredicted RBP4.91□□□□□ -1.62
LINC00888-204ENST00000487386 CYP2A6P11509 494 aaPredicted RBP4.91□□□□□ -1.62
LINC00888-204ENST00000487386 HARSP12081 509 aaKnown RBP4.91□□□□□ -1.62
LINC00888-204ENST00000487386 ADRA1DP25100 572 aa4.91□□□□□ -1.62
LINC00888-204ENST00000487386 CERS1P27544 350 aa4.91□□□□□ -1.62
LINC00888-204ENST00000487386 NEK3P51956 506 aa4.91□□□□□ -1.62
LINC00888-204ENST00000487386 COPB1P53618 953 aaKnown RBP4.91□□□□□ -1.62
LINC00888-204ENST00000487386 CFHR3Q02985 330 aa4.91□□□□□ -1.62
LINC00888-204ENST00000487386 PMS2P11Q13670 270 aa4.91□□□□□ -1.62
LINC00888-204ENST00000487386 SLC35G1Q2M3R5 365 aa4.91□□□□□ -1.62
LINC00888-204ENST00000487386 MAP9Q49MG5 647 aa4.91□□□□□ -1.62
LINC00888-204ENST00000487386 C4orf46Q504U0 113 aa4.91□□□□□ -1.62
LINC00888-204ENST00000487386 CEP78Q5JTW2 689 aa4.91□□□□□ -1.62
LINC00888-204ENST00000487386 IZUMO3Q5VZ72 239 aa4.91□□□□□ -1.62
LINC00888-204ENST00000487386 RAP1GAP2Q684P5 730 aa4.91□□□□□ -1.62
LINC00888-204ENST00000487386 GRHL2Q6ISB3 625 aa4.91□□□□□ -1.62
LINC00888-204ENST00000487386 MRNIPQ6NTE8 343 aa4.91□□□□□ -1.62
LINC00888-204ENST00000487386 CCDC28AQ8IWP9 274 aa4.91□□□□□ -1.62
LINC00888-204ENST00000487386 OR2C3Q8N628 320 aa4.91□□□□□ -1.62
LINC00888-204ENST00000487386 C12orf76Q8N812 135 aaPredicted RBP4.91□□□□□ -1.62
LINC00888-204ENST00000487386 DDX51Q8N8A6 666 aaKnown RBP eCLIP4.91□□□□□ -1.62
LINC00888-204ENST00000487386 CCDC17Q96LX7 622 aa4.91□□□□□ -1.62
LINC00888-204ENST00000487386 FYTTD1Q96QD9 318 aaKnown RBP4.91□□□□□ -1.62
LINC00888-204ENST00000487386 EIF2AQ9BY44 585 aaKnown RBP4.91□□□□□ -1.62
LINC00888-204ENST00000487386 FNIP2Q9P278 1114 aa4.91□□□□□ -1.62
LINC00888-204ENST00000487386 ZMYND8Q9ULU4 1186 aaPredicted RBP4.91□□□□□ -1.62
LINC00888-204ENST00000487386 UBE2Q2LH0YL09 131 aa4.9□□□□□ -1.63
LINC00888-204ENST00000487386 COQ9O75208 318 aa4.9□□□□□ -1.63
LINC00888-204ENST00000487386 WDR47O94967 919 aa4.9□□□□□ -1.63
LINC00888-204ENST00000487386 NDST3O95803 873 aa4.9□□□□□ -1.63
LINC00888-204ENST00000487386 TMEM225BP0DP42 221 aa4.9□□□□□ -1.63
LINC00888-204ENST00000487386 MST1P26927 711 aa4.9□□□□□ -1.63
LINC00888-204ENST00000487386 GPC5P78333 572 aa4.9□□□□□ -1.63
LINC00888-204ENST00000487386 PICALMQ13492 652 aa4.9□□□□□ -1.63
LINC00888-204ENST00000487386 DNASE1L3Q13609 305 aa4.9□□□□□ -1.63
LINC00888-204ENST00000487386 LARS2Q15031 903 aaKnown RBP4.9□□□□□ -1.63
LINC00888-204ENST00000487386 EEF1AKMT2Q5JPI9 291 aaKnown RBP4.9□□□□□ -1.63
LINC00888-204ENST00000487386 FAXCQ5TGI0 409 aa4.9□□□□□ -1.63
LINC00888-204ENST00000487386 SERPINA13PQ6UXR4 307 aa4.9□□□□□ -1.63
LINC00888-204ENST00000487386 FSTL5Q8N475 847 aaPredicted RBP4.9□□□□□ -1.63
LINC00888-204ENST00000487386 GLIS1Q8NBF1 620 aa4.9□□□□□ -1.63
LINC00888-204ENST00000487386 CCDC150Q8NCX0 1101 aa4.9□□□□□ -1.63
LINC00888-204ENST00000487386 MAFAQ8NHW3 353 aaPredicted RBP4.9□□□□□ -1.63
LINC00888-204ENST00000487386 PNISRQ8TF01 805 aaKnown RBP4.9□□□□□ -1.63
LINC00888-204ENST00000487386 ABHD5Q8WTS1 349 aa4.9□□□□□ -1.63
LINC00888-204ENST00000487386 CCDC138Q96M89 665 aa4.9□□□□□ -1.63
LINC00888-204ENST00000487386 RGL1Q9NZL6 768 aa4.9□□□□□ -1.63
LINC00888-204ENST00000487386 TMOD4Q9NZQ9 345 aa4.9□□□□□ -1.63
LINC00888-204ENST00000487386 SEMA5BQ9P283 1151 aa4.9□□□□□ -1.63
LINC00888-204ENST00000487386 FZD4Q9ULV1 537 aa4.9□□□□□ -1.63
Retrieved 100 of 20,778 RNA–protein pairs in 30.2 ms