RNA–Protein interactions for RNA: ENST00000487311.1

SRRT-212, Transcript of serrate, RNA effector molecule, humanhuman

TSL 2

Gene SRRT, Length 563 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRRT-212ENST00000487311 BIRC3Q13489 604 aa17.13■□□□□ 0.33
SRRT-212ENST00000487311 ZNF699Q32M78 642 aa17.13■□□□□ 0.33
SRRT-212ENST00000487311 FOXD4L6Q3SYB3 417 aaPredicted RBP17.13■□□□□ 0.33
SRRT-212ENST00000487311 ZNF667Q5HYK9 610 aa17.13■□□□□ 0.33
SRRT-212ENST00000487311 C10orf76Q5T2E6 689 aa17.13■□□□□ 0.33
SRRT-212ENST00000487311 FOXD4L3Q6VB84 417 aaPredicted RBP17.13■□□□□ 0.33
SRRT-212ENST00000487311 TOGARAM2Q6ZUX3 1019 aa17.13■□□□□ 0.33
SRRT-212ENST00000487311 HTR3DQ70Z44 454 aa17.13■□□□□ 0.33
SRRT-212ENST00000487311 PIP4P1Q86T03 277 aa17.13■□□□□ 0.33
SRRT-212ENST00000487311 OR2I1PQ8NGU4 316 aa17.13■□□□□ 0.33
SRRT-212ENST00000487311 KCNV2Q8TDN2 545 aa17.13■□□□□ 0.33
SRRT-212ENST00000487311 DUSP9Q99956 384 aaKnown RBP17.13■□□□□ 0.33
SRRT-212ENST00000487311 CSNK1G1Q9HCP0 422 aa17.13■□□□□ 0.33
SRRT-212ENST00000487311 CD93Q9NPY3 652 aa17.13■□□□□ 0.33
SRRT-212ENST00000487311 COMMD8Q9NX08 183 aa17.13■□□□□ 0.33
SRRT-212ENST00000487311 CALCOCO1Q9P1Z2 691 aa17.13■□□□□ 0.33
SRRT-212ENST00000487311 STARD13Q9Y3M8 1113 aa17.13■□□□□ 0.33
SRRT-212ENST00000487311 PLXND1Q9Y4D7 1925 aa17.13■□□□□ 0.33
SRRT-212ENST00000487311 PVALEFA0A1B0GWK0 134 aa17.12■□□□□ 0.33
SRRT-212ENST00000487311 HYAL3O43820 417 aaPredicted RBP17.12■□□□□ 0.33
SRRT-212ENST00000487311 KLRC4O43908 158 aa17.12■□□□□ 0.33
SRRT-212ENST00000487311 TLR5O60602 858 aa17.12■□□□□ 0.33
SRRT-212ENST00000487311 YEATS4O95619 227 aa17.12■□□□□ 0.33
SRRT-212ENST00000487311 CFIP05156 583 aa17.12■□□□□ 0.33
SRRT-212ENST00000487311 HOXB2P14652 356 aa17.12■□□□□ 0.33
SRRT-212ENST00000487311 NTSR1P30989 418 aa17.12■□□□□ 0.33
SRRT-212ENST00000487311 NDST1P52848 882 aa17.12■□□□□ 0.33
SRRT-212ENST00000487311 RPL6Q02878 288 aaKnown RBP17.12■□□□□ 0.33
SRRT-212ENST00000487311 STK4Q13043 487 aa17.12■□□□□ 0.33
SRRT-212ENST00000487311 BYSLQ13895 437 aaKnown RBP17.12■□□□□ 0.33
SRRT-212ENST00000487311 SPOPLQ6IQ16 392 aa17.12■□□□□ 0.33
SRRT-212ENST00000487311 TPGS1Q6ZTW0 290 aa17.12■□□□□ 0.33
SRRT-212ENST00000487311 GPRIN1Q7Z2K8 1008 aa17.12■□□□□ 0.33
SRRT-212ENST00000487311 SLC41A1Q8IVJ1 513 aa17.12■□□□□ 0.33
SRRT-212ENST00000487311 CRYBG2Q8N1P7 616 aa17.12■□□□□ 0.33
SRRT-212ENST00000487311 SLC2A14Q8TDB8 520 aa17.12■□□□□ 0.33
SRRT-212ENST00000487311 TNIP3Q96KP6 325 aa17.12■□□□□ 0.33
SRRT-212ENST00000487311 ZNF396Q96N95 335 aaPredicted RBP17.12■□□□□ 0.33
SRRT-212ENST00000487311 SLC6A17Q9H1V8 727 aa17.12■□□□□ 0.33
SRRT-212ENST00000487311 CAPN10Q9HC96 672 aa17.12■□□□□ 0.33
SRRT-212ENST00000487311 CGNQ9P2M7 1197 aaKnown RBP17.12■□□□□ 0.33
SRRT-212ENST00000487311 NUDT5Q9UKK9 219 aa17.12■□□□□ 0.33
SRRT-212ENST00000487311 PCDHA7Q9UN72 937 aa17.12■□□□□ 0.33
SRRT-212ENST00000487311 CEP295Q9C0D2 2601 aa17.12■□□□□ 0.33
SRRT-212ENST00000487311 AKAP13Q12802 2813 aa17.11■□□□□ 0.33
SRRT-212ENST00000487311 IGHV1OR15-9A0A0B4J2B8 117 aa17.11■□□□□ 0.33
SRRT-212ENST00000487311 WASH3PC4AMC7 463 aa17.11■□□□□ 0.33
SRRT-212ENST00000487311 HHLA1C9JL84 531 aa17.11■□□□□ 0.33
SRRT-212ENST00000487311 MDM4O15151 490 aa17.11■□□□□ 0.33
SRRT-212ENST00000487311 ZNF33AQ06730 810 aa17.11■□□□□ 0.33
SRRT-212ENST00000487311 DUOXA1Q1HG43 343 aa17.11■□□□□ 0.33
SRRT-212ENST00000487311 C1orf220Q5T0J3 134 aa17.11■□□□□ 0.33
SRRT-212ENST00000487311 KIAA0895Q8NCT3 520 aa17.11■□□□□ 0.33
SRRT-212ENST00000487311 IPO4Q8TEX9 1081 aaKnown RBP17.11■□□□□ 0.33
SRRT-212ENST00000487311 TWNKQ96RR1 684 aa17.11■□□□□ 0.33
SRRT-212ENST00000487311 GTPBP2Q9BX10 602 aaKnown RBP17.11■□□□□ 0.33
SRRT-212ENST00000487311 UTP3Q9NQZ2 479 aaKnown RBP eCLIP17.11■□□□□ 0.33
SRRT-212ENST00000487311 FAM49BQ9NUQ9 324 aa17.11■□□□□ 0.33
SRRT-212ENST00000487311 DNAJC17Q9NVM6 304 aaKnown RBP17.11■□□□□ 0.33
SRRT-212ENST00000487311 SLC6A14Q9UN76 642 aa17.11■□□□□ 0.33
SRRT-212ENST00000487311 RAD54BQ9Y620 910 aa17.11■□□□□ 0.33
SRRT-212ENST00000487311 ATP8B3O60423 1300 aa17.11■□□□□ 0.33
SRRT-212ENST00000487311 NEDD8-MDP1E9PL57 170 aa17.1■□□□□ 0.33
SRRT-212ENST00000487311 K7ELQ4 463 aaPredicted RBP17.1■□□□□ 0.33
SRRT-212ENST00000487311 AP5Z1O43299 807 aa17.1■□□□□ 0.33
SRRT-212ENST00000487311 SERPINF2P08697 491 aa17.1■□□□□ 0.33
SRRT-212ENST00000487311 CISD3P0C7P0 127 aa17.1■□□□□ 0.33
SRRT-212ENST00000487311 HOXB3P14651 431 aaPredicted RBP17.1■□□□□ 0.33
SRRT-212ENST00000487311 TYRP14679 529 aa17.1■□□□□ 0.33
SRRT-212ENST00000487311 NDUFV2P19404 249 aa17.1■□□□□ 0.33
SRRT-212ENST00000487311 SGSM1Q2NKQ1 1148 aa17.1■□□□□ 0.33
SRRT-212ENST00000487311 GRAMD4Q6IC98 578 aa17.1■□□□□ 0.33
SRRT-212ENST00000487311 TRMT11Q7Z4G4 463 aaKnown RBP17.1■□□□□ 0.33
SRRT-212ENST00000487311 BBS2Q9BXC9 721 aa17.1■□□□□ 0.33
SRRT-212ENST00000487311 NACA2Q9H009 215 aa17.1■□□□□ 0.33
SRRT-212ENST00000487311 KCTD10Q9H3F6 313 aa17.1■□□□□ 0.33
SRRT-212ENST00000487311 SLC32A1Q9H598 525 aa17.1■□□□□ 0.33
SRRT-212ENST00000487311 MAGEF1Q9HAY2 307 aa17.1■□□□□ 0.33
SRRT-212ENST00000487311 NMUR1Q9HB89 426 aa17.1■□□□□ 0.33
SRRT-212ENST00000487311 TLR8Q9NR97 1041 aaKnown RBP17.1■□□□□ 0.33
SRRT-212ENST00000487311 SERTAD1Q9UHV2 236 aa17.1■□□□□ 0.33
SRRT-212ENST00000487311 KLK13Q9UKR3 277 aa17.1■□□□□ 0.33
SRRT-212ENST00000487311 CYP8B1Q9UNU6 501 aa17.1■□□□□ 0.33
SRRT-212ENST00000487311 CACNA1EQ15878 2313 aa17.1■□□□□ 0.33
SRRT-212ENST00000487311 SRRM3A6NNA2 597 aaPredicted RBP17.09■□□□□ 0.33
SRRT-212ENST00000487311 UPK3BL1B0FP48 263 aa17.09■□□□□ 0.33
SRRT-212ENST00000487311 UPK3BL2E5RIL1 263 aa17.09■□□□□ 0.33
SRRT-212ENST00000487311 CYP26A1O43174 497 aa17.09■□□□□ 0.33
SRRT-212ENST00000487311 CACNG3O60359 315 aa17.09■□□□□ 0.33
SRRT-212ENST00000487311 CLSTN1O94985 981 aa17.09■□□□□ 0.33
SRRT-212ENST00000487311 CD59P13987 128 aa17.09■□□□□ 0.33
SRRT-212ENST00000487311 ADORA2BP29275 332 aa17.09■□□□□ 0.33
SRRT-212ENST00000487311 AP3M2P53677 418 aa17.09■□□□□ 0.33
SRRT-212ENST00000487311 SIM1P81133 766 aaPredicted RBP17.09■□□□□ 0.33
SRRT-212ENST00000487311 GFPT1Q06210 699 aaPredicted RBP17.09■□□□□ 0.33
SRRT-212ENST00000487311 ZACNQ401N2 412 aa17.09■□□□□ 0.33
SRRT-212ENST00000487311 PREPLQ4J6C6 727 aaPredicted RBP17.09■□□□□ 0.33
SRRT-212ENST00000487311 RESP18Q5W5W9 173 aa17.09■□□□□ 0.33
SRRT-212ENST00000487311 SLC36A4Q6YBV0 504 aa17.09■□□□□ 0.33
SRRT-212ENST00000487311 SV2AQ7L0J3 742 aa17.09■□□□□ 0.33
Retrieved 100 of 20,778 RNA–protein pairs in 22.2 ms