RNA–Protein interactions for RNA: ENST00000487245.5

HLA-C-208, Transcript of major histocompatibility complex, class I, C, humanhuman

Gene HLA-C, Length 1,880 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-C-208ENST00000487245 FYB2Q5VWT5 728 aa27.16■■□□□ 1.94
HLA-C-208ENST00000487245 ALKAL1Q6UXT8 129 aa27.16■■□□□ 1.94
HLA-C-208ENST00000487245 TTC30AQ86WT1 665 aa27.16■■□□□ 1.94
HLA-C-208ENST00000487245 TBC1D31Q96DN5 1066 aa27.16■■□□□ 1.94
HLA-C-208ENST00000487245 MRRFQ96E11 262 aaKnown RBP27.16■■□□□ 1.94
HLA-C-208ENST00000487245 ZMAT2Q96NC0 199 aaKnown RBP27.16■■□□□ 1.94
HLA-C-208ENST00000487245 FAM49AQ9H0Q0 323 aaPredicted RBP27.16■■□□□ 1.94
HLA-C-208ENST00000487245 NOP53Q9NZM5 478 aaKnown RBP27.16■■□□□ 1.94
HLA-C-208ENST00000487245 TRAFD1O14545 582 aaPredicted RBP27.15■■□□□ 1.94
HLA-C-208ENST00000487245 CD4P01730 458 aa27.15■■□□□ 1.94
HLA-C-208ENST00000487245 SMIM10L2AP0DMW4 78 aa27.15■■□□□ 1.94
HLA-C-208ENST00000487245 SMIM10L2BP0DMW5 78 aa27.15■■□□□ 1.94
HLA-C-208ENST00000487245 DARSP14868 501 aaKnown RBP27.15■■□□□ 1.94
HLA-C-208ENST00000487245 SCNN1AP37088 669 aa27.15■■□□□ 1.94
HLA-C-208ENST00000487245 MMRN1Q13201 1228 aa27.15■■□□□ 1.94
HLA-C-208ENST00000487245 CHSY1Q86X52 802 aa27.15■■□□□ 1.94
HLA-C-208ENST00000487245 SLC44A1Q8WWI5 657 aa27.15■■□□□ 1.94
HLA-C-208ENST00000487245 MBLAC1A4D2B0 266 aaPredicted RBP27.15■■□□□ 1.94
HLA-C-208ENST00000487245 XPOTO43592 962 aaKnown RBP27.15■■□□□ 1.94
HLA-C-208ENST00000487245 DHRS4L1P0CG22 281 aa27.15■■□□□ 1.94
HLA-C-208ENST00000487245 ADRA1DP25100 572 aa27.15■■□□□ 1.94
HLA-C-208ENST00000487245 BASP1P80723 227 aaKnown RBP27.15■■□□□ 1.94
HLA-C-208ENST00000487245 ATP11AP98196 1134 aa27.15■■□□□ 1.94
HLA-C-208ENST00000487245 SLC18A2Q05940 514 aa27.15■■□□□ 1.94
HLA-C-208ENST00000487245 SEPT7Q16181 437 aaKnown RBP27.15■■□□□ 1.94
HLA-C-208ENST00000487245 C9orf57Q5W0N0 161 aa27.15■■□□□ 1.94
HLA-C-208ENST00000487245 NPLOC4Q8TAT6 608 aa27.15■■□□□ 1.94
HLA-C-208ENST00000487245 TCP10LQ8TDR4 215 aa27.15■■□□□ 1.94
HLA-C-208ENST00000487245 STAMBPL1Q96FJ0 436 aa27.15■■□□□ 1.94
HLA-C-208ENST00000487245 EIF2AQ9BY44 585 aaKnown RBP27.15■■□□□ 1.94
HLA-C-208ENST00000487245 SAR1AQ9NR31 198 aa27.15■■□□□ 1.94
HLA-C-208ENST00000487245 PAK5Q9P286 719 aa27.15■■□□□ 1.94
HLA-C-208ENST00000487245 H7C0C1 242 aa27.14■■□□□ 1.94
HLA-C-208ENST00000487245 PIK3R2O00459 728 aa27.14■■□□□ 1.94
HLA-C-208ENST00000487245 MDM4O15151 490 aa27.14■■□□□ 1.94
HLA-C-208ENST00000487245 HNRNPCL1O60812 293 aaKnown RBP27.14■■□□□ 1.94
HLA-C-208ENST00000487245 ECM2O94769 699 aaPredicted RBP27.14■■□□□ 1.94
HLA-C-208ENST00000487245 F2P00734 622 aa27.14■■□□□ 1.94
HLA-C-208ENST00000487245 ELF1P32519 619 aa27.14■■□□□ 1.94
HLA-C-208ENST00000487245 ELK3P41970 407 aa27.14■■□□□ 1.94
HLA-C-208ENST00000487245 ATP5OP48047 213 aa27.14■■□□□ 1.94
HLA-C-208ENST00000487245 CDO1Q16878 200 aa27.14■■□□□ 1.94
HLA-C-208ENST00000487245 OR6B3Q8NGW1 331 aa27.14■■□□□ 1.94
HLA-C-208ENST00000487245 FAM172AQ8WUF8 416 aa27.14■■□□□ 1.94
HLA-C-208ENST00000487245 UTP4Q969X6 686 aaKnown RBP27.14■■□□□ 1.94
HLA-C-208ENST00000487245 TRIM6Q9C030 488 aaPredicted RBP27.14■■□□□ 1.94
HLA-C-208ENST00000487245 GINS2Q9Y248 185 aa27.14■■□□□ 1.94
HLA-C-208ENST00000487245 C15orf41Q9Y2V0 281 aa27.14■■□□□ 1.94
HLA-C-208ENST00000487245 APOL1O14791 398 aa27.13■■□□□ 1.93
HLA-C-208ENST00000487245 DYNC1LI2O43237 492 aaPredicted RBP27.13■■□□□ 1.93
HLA-C-208ENST00000487245 GRAP2O75791 330 aa27.13■■□□□ 1.93
HLA-C-208ENST00000487245 IL1BP01584 269 aa27.13■■□□□ 1.93
HLA-C-208ENST00000487245 TROVE2P10155 538 aaKnown RBP eCLIP27.13■■□□□ 1.93
HLA-C-208ENST00000487245 CYP2C9P11712 490 aa27.13■■□□□ 1.93
HLA-C-208ENST00000487245 MAGEA6P43360 314 aa27.13■■□□□ 1.93
HLA-C-208ENST00000487245 RASSF2P50749 326 aa27.13■■□□□ 1.93
HLA-C-208ENST00000487245 NEK3P51956 506 aa27.13■■□□□ 1.93
HLA-C-208ENST00000487245 SCYL2Q6P3W7 929 aa27.13■■□□□ 1.93
HLA-C-208ENST00000487245 C4orf22Q6V702 233 aa27.13■■□□□ 1.93
HLA-C-208ENST00000487245 ARCQ7LC44 396 aa27.13■■□□□ 1.93
HLA-C-208ENST00000487245 PIWIL1Q96J94 861 aaKnown RBP27.13■■□□□ 1.93
HLA-C-208ENST00000487245 USP29Q9HBJ7 922 aa27.13■■□□□ 1.93
HLA-C-208ENST00000487245 NGRNQ9NPE2 291 aaKnown RBP27.13■■□□□ 1.93
HLA-C-208ENST00000487245 TUBGCP4Q9UGJ1 667 aa27.13■■□□□ 1.93
HLA-C-208ENST00000487245 CHMP2BQ9UQN3 213 aa27.13■■□□□ 1.93
HLA-C-208ENST00000487245 STK38LQ9Y2H1 464 aa27.13■■□□□ 1.93
HLA-C-208ENST00000487245 MT-ND3P03897 115 aa27.13■■□□□ 1.93
HLA-C-208ENST00000487245 PNPLA4P41247 253 aa27.13■■□□□ 1.93
HLA-C-208ENST00000487245 PTPN9P43378 593 aa27.13■■□□□ 1.93
HLA-C-208ENST00000487245 NPNTQ6UXI9 565 aa27.13■■□□□ 1.93
HLA-C-208ENST00000487245 SH2D5Q6ZV89 423 aa27.13■■□□□ 1.93
HLA-C-208ENST00000487245 IGDCC3Q8IVU1 814 aa27.13■■□□□ 1.93
HLA-C-208ENST00000487245 CRYBG2Q8N1P7 616 aa27.13■■□□□ 1.93
HLA-C-208ENST00000487245 PLD5Q8N7P1 536 aa27.13■■□□□ 1.93
HLA-C-208ENST00000487245 KHSRPQ92945 711 aaKnown RBP eCLIP27.13■■□□□ 1.93
HLA-C-208ENST00000487245 APOPT1Q96IL0 206 aa27.13■■□□□ 1.93
HLA-C-208ENST00000487245 ZNF560Q96MR9 790 aa27.13■■□□□ 1.93
HLA-C-208ENST00000487245 ZNF670Q9BS34 389 aa27.13■■□□□ 1.93
HLA-C-208ENST00000487245 PCDH18Q9HCL0 1135 aa27.13■■□□□ 1.93
HLA-C-208ENST00000487245 RPL26L1Q9UNX3 145 aaKnown RBP27.13■■□□□ 1.93
HLA-C-208ENST00000487245 ZNF236Q9UL36 1845 aa27.12■■□□□ 1.93
HLA-C-208ENST00000487245 TCRBV9S1A1TA0A576 114 aa27.12■■□□□ 1.93
HLA-C-208ENST00000487245 A8MXQ7 604 aa27.12■■□□□ 1.93
HLA-C-208ENST00000487245 PPEF2O14830 753 aa27.12■■□□□ 1.93
HLA-C-208ENST00000487245 ANP32DO95626 131 aa27.12■■□□□ 1.93
HLA-C-208ENST00000487245 T-ENOLP0DO92 83 aa27.12■■□□□ 1.93
HLA-C-208ENST00000487245 ZNF200P98182 395 aaPredicted RBP27.12■■□□□ 1.93
HLA-C-208ENST00000487245 TMEM62Q0P6H9 643 aa27.12■■□□□ 1.93
HLA-C-208ENST00000487245 SLC9A4Q6AI14 798 aa27.12■■□□□ 1.93
HLA-C-208ENST00000487245 NLRP9Q7RTR0 991 aa27.12■■□□□ 1.93
HLA-C-208ENST00000487245 OSMRQ99650 979 aa27.12■■□□□ 1.93
HLA-C-208ENST00000487245 FAM49BQ9NUQ9 324 aa27.12■■□□□ 1.93
HLA-C-208ENST00000487245 TRIP11Q15643 1979 aa27.12■■□□□ 1.93
HLA-C-208ENST00000487245 SCN1AP35498 2009 aa27.11■■□□□ 1.93
HLA-C-208ENST00000487245 BCLAF3A2AJT9 711 aaKnown RBP27.11■■□□□ 1.93
HLA-C-208ENST00000487245 A8MUI8 341 aa27.11■■□□□ 1.93
HLA-C-208ENST00000487245 PAPSS1O43252 624 aaPredicted RBP27.11■■□□□ 1.93
HLA-C-208ENST00000487245 RECQL4O94761 1208 aa27.11■■□□□ 1.93
HLA-C-208ENST00000487245 ACADSBP45954 432 aa27.11■■□□□ 1.93
HLA-C-208ENST00000487245 CCNG1P51959 295 aa27.11■■□□□ 1.93
Retrieved 100 of 20,778 RNA–protein pairs in 17.1 ms