RNA–Protein interactions for RNA: ENST00000487215.1

SMPDL3A-202, Transcript of sphingomyelin phosphodiesterase acid like 3A, humanhuman

TSL 2

Gene SMPDL3A, Length 903 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMPDL3A-202ENST00000487215 ZNF217O75362 1048 aa20.58■□□□□ 0.89
SMPDL3A-202ENST00000487215 AP1G2O75843 785 aa20.58■□□□□ 0.89
SMPDL3A-202ENST00000487215 CD59P13987 128 aa20.58■□□□□ 0.89
SMPDL3A-202ENST00000487215 CASP4P49662 377 aa20.58■□□□□ 0.89
SMPDL3A-202ENST00000487215 SNRPFP62306 86 aaKnown RBP20.58■□□□□ 0.89
SMPDL3A-202ENST00000487215 AMPD3Q01432 767 aa20.58■□□□□ 0.89
SMPDL3A-202ENST00000487215 ZNF699Q32M78 642 aa20.58■□□□□ 0.89
SMPDL3A-202ENST00000487215 CNNM4Q6P4Q7 775 aa20.58■□□□□ 0.89
SMPDL3A-202ENST00000487215 SCARA5Q6ZMJ2 495 aa20.58■□□□□ 0.89
SMPDL3A-202ENST00000487215 CHPFQ8IZ52 775 aa20.58■□□□□ 0.89
SMPDL3A-202ENST00000487215 FUKQ8N0W3 1084 aa20.58■□□□□ 0.89
SMPDL3A-202ENST00000487215 CHCHD4Q8N4Q1 142 aa20.58■□□□□ 0.89
SMPDL3A-202ENST00000487215 TRIML1Q8N9V2 468 aa20.58■□□□□ 0.89
SMPDL3A-202ENST00000487215 ZMIZ2Q8NF64 920 aa20.58■□□□□ 0.89
SMPDL3A-202ENST00000487215 PLEKHO2Q8TD55 490 aa20.58■□□□□ 0.89
SMPDL3A-202ENST00000487215 DHX58Q96C10 678 aa20.58■□□□□ 0.89
SMPDL3A-202ENST00000487215 TNIP3Q96KP6 325 aa20.58■□□□□ 0.89
SMPDL3A-202ENST00000487215 HSPA12BQ96MM6 686 aa20.58■□□□□ 0.89
SMPDL3A-202ENST00000487215 SDCBP2Q9H190 292 aa20.58■□□□□ 0.89
SMPDL3A-202ENST00000487215 CD93Q9NPY3 652 aa20.58■□□□□ 0.89
SMPDL3A-202ENST00000487215 LHX6Q9UPM6 363 aa20.58■□□□□ 0.89
SMPDL3A-202ENST00000487215 MTMR6Q9Y217 621 aa20.58■□□□□ 0.89
SMPDL3A-202ENST00000487215 ADAMTS9Q9P2N4 1935 aa20.58■□□□□ 0.88
SMPDL3A-202ENST00000487215 PKD1L2Q7Z442 2459 aa20.58■□□□□ 0.88
SMPDL3A-202ENST00000487215 BAHCC1Q9P281 2608 aa20.57■□□□□ 0.88
SMPDL3A-202ENST00000487215 A0A1W2PQD8 194 aa20.57■□□□□ 0.88
SMPDL3A-202ENST00000487215 FAM221BA6H8Z2 402 aa20.57■□□□□ 0.88
SMPDL3A-202ENST00000487215 NEDD8-MDP1E9PL57 170 aa20.57■□□□□ 0.88
SMPDL3A-202ENST00000487215 ZBTB24O43167 697 aaPredicted RBP20.57■□□□□ 0.88
SMPDL3A-202ENST00000487215 CACNG3O60359 315 aa20.57■□□□□ 0.88
SMPDL3A-202ENST00000487215 RDXP35241 583 aaKnown RBP20.57■□□□□ 0.88
SMPDL3A-202ENST00000487215 ATRXP46100 2492 aa20.57■□□□□ 0.88
SMPDL3A-202ENST00000487215 EHHADHQ08426 723 aa20.57■□□□□ 0.88
SMPDL3A-202ENST00000487215 BIRC3Q13489 604 aa20.57■□□□□ 0.88
SMPDL3A-202ENST00000487215 STK38Q15208 465 aa20.57■□□□□ 0.88
SMPDL3A-202ENST00000487215 SDE2Q6IQ49 451 aa20.57■□□□□ 0.88
SMPDL3A-202ENST00000487215 LRSAM1Q6UWE0 723 aa20.57■□□□□ 0.88
SMPDL3A-202ENST00000487215 HTR3DQ70Z44 454 aa20.57■□□□□ 0.88
SMPDL3A-202ENST00000487215 LINC00301Q8NCQ3 95 aa20.57■□□□□ 0.88
SMPDL3A-202ENST00000487215 ELMO3Q96BJ8 720 aa20.57■□□□□ 0.88
SMPDL3A-202ENST00000487215 SMOQ99835 787 aa20.57■□□□□ 0.88
SMPDL3A-202ENST00000487215 GABRG3Q99928 467 aa20.57■□□□□ 0.88
SMPDL3A-202ENST00000487215 BBS2Q9BXC9 721 aa20.57■□□□□ 0.88
SMPDL3A-202ENST00000487215 DNAAF2Q9NVR5 837 aaKnown RBP20.57■□□□□ 0.88
SMPDL3A-202ENST00000487215 RAD54BQ9Y620 910 aa20.57■□□□□ 0.88
SMPDL3A-202ENST00000487215 CACNA1EQ15878 2313 aa20.56■□□□□ 0.88
SMPDL3A-202ENST00000487215 PI4KAP42356 2102 aa20.56■□□□□ 0.88
SMPDL3A-202ENST00000487215 PRRT4C9JH25 899 aa20.56■□□□□ 0.88
SMPDL3A-202ENST00000487215 BEST1O76090 585 aa20.56■□□□□ 0.88
SMPDL3A-202ENST00000487215 CLSTN1O94985 981 aa20.56■□□□□ 0.88
SMPDL3A-202ENST00000487215 SYPP08247 313 aa20.56■□□□□ 0.88
SMPDL3A-202ENST00000487215 CCDC130P13994 396 aa20.56■□□□□ 0.88
SMPDL3A-202ENST00000487215 TYRP14679 529 aa20.56■□□□□ 0.88
SMPDL3A-202ENST00000487215 BMT2Q1RMZ1 405 aa20.56■□□□□ 0.88
SMPDL3A-202ENST00000487215 ZNF423Q2M1K9 1284 aa20.56■□□□□ 0.88
SMPDL3A-202ENST00000487215 ZNF667Q5HYK9 610 aa20.56■□□□□ 0.88
SMPDL3A-202ENST00000487215 TOGARAM2Q6ZUX3 1019 aa20.56■□□□□ 0.88
SMPDL3A-202ENST00000487215 RAB44Q7Z6P3 723 aaPredicted RBP20.56■□□□□ 0.88
SMPDL3A-202ENST00000487215 ACOT1Q86TX2 421 aa20.56■□□□□ 0.88
SMPDL3A-202ENST00000487215 C12orf56Q8IXR9 622 aa20.56■□□□□ 0.88
SMPDL3A-202ENST00000487215 XPO6Q96QU8 1125 aaKnown RBP20.56■□□□□ 0.88
SMPDL3A-202ENST00000487215 C7orf25Q9BPX7 421 aa20.56■□□□□ 0.88
SMPDL3A-202ENST00000487215 KLF16Q9BXK1 252 aaPredicted RBP20.56■□□□□ 0.88
SMPDL3A-202ENST00000487215 SLC6A17Q9H1V8 727 aa20.56■□□□□ 0.88
SMPDL3A-202ENST00000487215 MARK1Q9P0L2 795 aa20.56■□□□□ 0.88
SMPDL3A-202ENST00000487215 CEP192Q8TEP8 1941 aa20.56■□□□□ 0.88
SMPDL3A-202ENST00000487215 PCNX2A6NKB5 2137 aa20.55■□□□□ 0.88
SMPDL3A-202ENST00000487215 TAF4O00268 1085 aa20.55■□□□□ 0.88
SMPDL3A-202ENST00000487215 EXOC3O60645 756 aa20.55■□□□□ 0.88
SMPDL3A-202ENST00000487215 TBX18O95935 607 aa20.55■□□□□ 0.88
SMPDL3A-202ENST00000487215 ORC1Q13415 861 aa20.55■□□□□ 0.88
SMPDL3A-202ENST00000487215 NCOA4Q13772 614 aa20.55■□□□□ 0.88
SMPDL3A-202ENST00000487215 HNRNPDQ14103 355 aaKnown RBP20.55■□□□□ 0.88
SMPDL3A-202ENST00000487215 TPGS1Q6ZTW0 290 aa20.55■□□□□ 0.88
SMPDL3A-202ENST00000487215 UNC13DQ70J99 1090 aa20.55■□□□□ 0.88
SMPDL3A-202ENST00000487215 SLC2A14Q8TDB8 520 aa20.55■□□□□ 0.88
SMPDL3A-202ENST00000487215 ZNF419Q96HQ0 510 aaPredicted RBP20.55■□□□□ 0.88
SMPDL3A-202ENST00000487215 CAMK1GQ96NX5 476 aa20.55■□□□□ 0.88
SMPDL3A-202ENST00000487215 ZSCAN16Q9H4T2 348 aaPredicted RBP20.55■□□□□ 0.88
SMPDL3A-202ENST00000487215 CSNK1G1Q9HCP0 422 aa20.55■□□□□ 0.88
SMPDL3A-202ENST00000487215 TLR8Q9NR97 1041 aaKnown RBP20.55■□□□□ 0.88
SMPDL3A-202ENST00000487215 CACNA2D2Q9NY47 1150 aa20.55■□□□□ 0.88
SMPDL3A-202ENST00000487215 WDR35Q9P2L0 1181 aa20.55■□□□□ 0.88
SMPDL3A-202ENST00000487215 GON4LQ3T8J9 2241 aa20.55■□□□□ 0.88
SMPDL3A-202ENST00000487215 MYO18AQ92614 2054 aaKnown RBP20.55■□□□□ 0.88
SMPDL3A-202ENST00000487215 LRRIQ3A6PVS8 624 aaPredicted RBP20.54■□□□□ 0.88
SMPDL3A-202ENST00000487215 SPTLC2O15270 562 aa20.54■□□□□ 0.88
SMPDL3A-202ENST00000487215 SH3BP5O60239 455 aa20.54■□□□□ 0.88
SMPDL3A-202ENST00000487215 GJB3O75712 270 aa20.54■□□□□ 0.88
SMPDL3A-202ENST00000487215 CAPNS1P04632 268 aa20.54■□□□□ 0.88
SMPDL3A-202ENST00000487215 CASP1P29466 404 aa20.54■□□□□ 0.88
SMPDL3A-202ENST00000487215 MAP3K7CLP57077 242 aa20.54■□□□□ 0.88
SMPDL3A-202ENST00000487215 PLEKHG6Q3KR16 790 aa20.54■□□□□ 0.88
SMPDL3A-202ENST00000487215 RGL4Q8IZJ4 473 aa20.54■□□□□ 0.88
SMPDL3A-202ENST00000487215 IQUBQ8NA54 791 aa20.54■□□□□ 0.88
SMPDL3A-202ENST00000487215 MRGPRX1Q96LB2 322 aa20.54■□□□□ 0.88
SMPDL3A-202ENST00000487215 FBXO44Q9H4M3 255 aa20.54■□□□□ 0.88
SMPDL3A-202ENST00000487215 FAM124BQ9H5Z6 455 aaPredicted RBP20.54■□□□□ 0.88
SMPDL3A-202ENST00000487215 CYLDQ9NQC7 956 aa20.54■□□□□ 0.88
SMPDL3A-202ENST00000487215 OSER1Q9NX31 292 aa20.54■□□□□ 0.88
Retrieved 100 of 20,778 RNA–protein pairs in 50.4 ms