RNA–Protein interactions for RNA: ENST00000487010.1

COL3A1-206, Transcript of collagen type III alpha 1 chain, humanhuman

TSL 2

Gene COL3A1, Length 2,054 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL3A1-206ENST00000487010 MARCOQ9UEW3 520 aaPredicted RBP12.68□□□□□ -0.38
COL3A1-206ENST00000487010 KLHL33A6NCF5 533 aa12.67□□□□□ -0.38
COL3A1-206ENST00000487010 PRR5-ARHGAP8B1AHC4 643 aa12.67□□□□□ -0.38
COL3A1-206ENST00000487010 OGTO15294 1046 aa12.67□□□□□ -0.38
COL3A1-206ENST00000487010 BIRC5O15392 142 aa12.67□□□□□ -0.38
COL3A1-206ENST00000487010 UGT1A9O60656 530 aa12.67□□□□□ -0.38
COL3A1-206ENST00000487010 MSCO60682 206 aa12.67□□□□□ -0.38
COL3A1-206ENST00000487010 BAG2O95816 211 aa12.67□□□□□ -0.38
COL3A1-206ENST00000487010 APBA3O96018 575 aa12.67□□□□□ -0.38
COL3A1-206ENST00000487010 BPGMP07738 259 aa12.67□□□□□ -0.38
COL3A1-206ENST00000487010 CRHR1P34998 444 aa12.67□□□□□ -0.38
COL3A1-206ENST00000487010 RAP1GAPP47736 663 aa12.67□□□□□ -0.38
COL3A1-206ENST00000487010 ARHGAP8P85298 464 aa12.67□□□□□ -0.38
COL3A1-206ENST00000487010 BMPR2Q13873 1038 aa12.67□□□□□ -0.38
COL3A1-206ENST00000487010 MCRS1Q96EZ8 462 aa12.67□□□□□ -0.38
COL3A1-206ENST00000487010 RILPQ96NA2 401 aa12.67□□□□□ -0.38
COL3A1-206ENST00000487010 TTC1Q99614 292 aa12.67□□□□□ -0.38
COL3A1-206ENST00000487010 DDX50Q9BQ39 737 aaKnown RBP12.67□□□□□ -0.38
COL3A1-206ENST00000487010 SDCBP2Q9H190 292 aa12.67□□□□□ -0.38
COL3A1-206ENST00000487010 UGT1A7Q9HAW7 530 aa12.67□□□□□ -0.38
COL3A1-206ENST00000487010 UGT1A10Q9HAW8 530 aa12.67□□□□□ -0.38
COL3A1-206ENST00000487010 UGT1A8Q9HAW9 530 aa12.67□□□□□ -0.38
COL3A1-206ENST00000487010 ZNF277Q9NRM2 450 aaPredicted RBP12.67□□□□□ -0.38
COL3A1-206ENST00000487010 NXF1Q9UBU9 619 aaKnown RBP12.67□□□□□ -0.38
COL3A1-206ENST00000487010 CPSF3Q9UKF6 684 aaKnown RBP12.67□□□□□ -0.38
COL3A1-206ENST00000487010 PPM1HQ9ULR3 514 aa12.67□□□□□ -0.38
COL3A1-206ENST00000487010 COL4A5P29400 1685 aa12.67□□□□□ -0.38
COL3A1-206ENST00000487010 SDR42E2A6NKP2 422 aa12.66□□□□□ -0.38
COL3A1-206ENST00000487010 WNT10BO00744 389 aa12.66□□□□□ -0.38
COL3A1-206ENST00000487010 KCNN4O15554 427 aa12.66□□□□□ -0.38
COL3A1-206ENST00000487010 FKBP6O75344 327 aa12.66□□□□□ -0.38
COL3A1-206ENST00000487010 KRT38O76015 456 aa12.66□□□□□ -0.38
COL3A1-206ENST00000487010 RTN3O95197 1032 aaPredicted RBP12.66□□□□□ -0.38
COL3A1-206ENST00000487010 APOEP02649 317 aa12.66□□□□□ -0.38
COL3A1-206ENST00000487010 HOXC6P09630 235 aa12.66□□□□□ -0.38
COL3A1-206ENST00000487010 GABRB2P47870 512 aa12.66□□□□□ -0.38
COL3A1-206ENST00000487010 ERFP50548 548 aa12.66□□□□□ -0.38
COL3A1-206ENST00000487010 WASHC5Q12768 1159 aa12.66□□□□□ -0.38
COL3A1-206ENST00000487010 TARBP2Q15633 366 aaKnown RBP12.66□□□□□ -0.38
COL3A1-206ENST00000487010 CYP4V2Q6ZWL3 525 aaPredicted RBP12.66□□□□□ -0.38
COL3A1-206ENST00000487010 SESTD1Q86VW0 696 aa12.66□□□□□ -0.38
COL3A1-206ENST00000487010 RTP4Q96DX8 246 aa12.66□□□□□ -0.38
COL3A1-206ENST00000487010 ACO2Q99798 780 aaKnown RBP12.66□□□□□ -0.38
COL3A1-206ENST00000487010 CCDC28BQ9BUN5 200 aa12.66□□□□□ -0.38
COL3A1-206ENST00000487010 STAU2Q9NUL3 570 aaKnown RBP eCLIP12.66□□□□□ -0.38
COL3A1-206ENST00000487010 A0A088AWK7 358 aa12.66□□□□□ -0.38
COL3A1-206ENST00000487010 BUD23O43709 281 aaKnown RBP12.66□□□□□ -0.38
COL3A1-206ENST00000487010 USP1O94782 785 aa12.66□□□□□ -0.38
COL3A1-206ENST00000487010 ZCCHC18P0CG32 403 aa12.66□□□□□ -0.38
COL3A1-206ENST00000487010 CSH1P0DML2 217 aa12.66□□□□□ -0.38
COL3A1-206ENST00000487010 CSH2P0DML3 217 aa12.66□□□□□ -0.38
COL3A1-206ENST00000487010 AOC1P19801 751 aa12.66□□□□□ -0.38
COL3A1-206ENST00000487010 CPOXP36551 454 aa12.66□□□□□ -0.38
COL3A1-206ENST00000487010 MAGEA6P43360 314 aa12.66□□□□□ -0.38
COL3A1-206ENST00000487010 ZNF143P52747 638 aaPredicted RBP12.66□□□□□ -0.38
COL3A1-206ENST00000487010 EFNA5P52803 228 aa12.66□□□□□ -0.38
COL3A1-206ENST00000487010 CNTN2Q02246 1040 aa12.66□□□□□ -0.38
COL3A1-206ENST00000487010 CDC16Q13042 620 aa12.66□□□□□ -0.38
COL3A1-206ENST00000487010 STX3Q13277 289 aa12.66□□□□□ -0.38
COL3A1-206ENST00000487010 UBAP2LQ14157 1087 aaKnown RBP12.66□□□□□ -0.38
COL3A1-206ENST00000487010 SH3PXD2AQ5TCZ1 1133 aa12.66□□□□□ -0.38
COL3A1-206ENST00000487010 FAXCQ5TGI0 409 aa12.66□□□□□ -0.38
COL3A1-206ENST00000487010 AAGABQ6PD74 315 aa12.66□□□□□ -0.38
COL3A1-206ENST00000487010 ADGRG6Q86SQ4 1221 aa12.66□□□□□ -0.38
COL3A1-206ENST00000487010 NDUFAF2Q8N183 169 aa12.66□□□□□ -0.38
COL3A1-206ENST00000487010 PRPF31Q8WWY3 499 aaKnown RBP12.66□□□□□ -0.38
COL3A1-206ENST00000487010 PPP2R3CQ969Q6 453 aa12.66□□□□□ -0.38
COL3A1-206ENST00000487010 RNF157Q96PX1 679 aa12.66□□□□□ -0.38
COL3A1-206ENST00000487010 TUBGCP5Q96RT8 1024 aa12.66□□□□□ -0.38
COL3A1-206ENST00000487010 EBF4Q9BQW3 602 aa12.66□□□□□ -0.38
COL3A1-206ENST00000487010 ADPGKQ9BRR6 497 aa12.66□□□□□ -0.38
COL3A1-206ENST00000487010 PCMTD2Q9NV79 361 aa12.66□□□□□ -0.38
COL3A1-206ENST00000487010 ETNK2Q9NVF9 386 aa12.66□□□□□ -0.38
COL3A1-206ENST00000487010 SORCS3Q9UPU3 1222 aa12.66□□□□□ -0.38
COL3A1-206ENST00000487010 RLFQ13129 1914 aa12.65□□□□□ -0.38
COL3A1-206ENST00000487010 IGKV6D-21A0A0A0MT36 114 aa12.65□□□□□ -0.38
COL3A1-206ENST00000487010 HMX2A2RU54 273 aa12.65□□□□□ -0.38
COL3A1-206ENST00000487010 SLC15A5A6NIM6 579 aa12.65□□□□□ -0.38
COL3A1-206ENST00000487010 MICAL2O94851 1124 aa12.65□□□□□ -0.38
COL3A1-206ENST00000487010 TNNC2P02585 160 aa12.65□□□□□ -0.38
COL3A1-206ENST00000487010 OAZ1P54368 228 aa12.65□□□□□ -0.38
COL3A1-206ENST00000487010 CDH8P55286 799 aa12.65□□□□□ -0.38
COL3A1-206ENST00000487010 ORC1Q13415 861 aa12.65□□□□□ -0.38
COL3A1-206ENST00000487010 HNRNPDQ14103 355 aaKnown RBP12.65□□□□□ -0.38
COL3A1-206ENST00000487010 FAM102AQ5T9C2 384 aaPredicted RBP12.65□□□□□ -0.38
COL3A1-206ENST00000487010 UNC5AQ6ZN44 842 aa12.65□□□□□ -0.38
COL3A1-206ENST00000487010 ARCQ7LC44 396 aa12.65□□□□□ -0.38
COL3A1-206ENST00000487010 ARHGAP18Q8N392 663 aa12.65□□□□□ -0.38
COL3A1-206ENST00000487010 PLD5Q8N7P1 536 aa12.65□□□□□ -0.38
COL3A1-206ENST00000487010 STKLD1Q8NE28 680 aa12.65□□□□□ -0.38
COL3A1-206ENST00000487010 AGBL3Q8NEM8 1001 aa12.65□□□□□ -0.38
COL3A1-206ENST00000487010 TRAF3IP1Q8TDR0 691 aaPredicted RBP12.65□□□□□ -0.38
COL3A1-206ENST00000487010 AZIN2Q96A70 460 aa12.65□□□□□ -0.38
COL3A1-206ENST00000487010 LRRC39Q96DD0 335 aa12.65□□□□□ -0.38
COL3A1-206ENST00000487010 TEPSINQ96N21 525 aa12.65□□□□□ -0.38
COL3A1-206ENST00000487010 BCO2Q9BYV7 579 aa12.65□□□□□ -0.38
COL3A1-206ENST00000487010 KLC2Q9H0B6 622 aa12.65□□□□□ -0.38
COL3A1-206ENST00000487010 S100A14Q9HCY8 104 aa12.65□□□□□ -0.38
COL3A1-206ENST00000487010 THAP1Q9NVV9 213 aa12.65□□□□□ -0.38
COL3A1-206ENST00000487010 ZNF214Q9UL59 606 aaPredicted RBP12.65□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 48.6 ms